Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L22
         (1268 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical pr...   124   2e-28
Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical pr...    42   0.001
AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical ...    41   0.002
AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like ...    39   0.009
Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical pr...    38   0.015
Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical pr...    37   0.026
Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical pr...    35   0.11 
U42436-7|AAO61428.2|  223|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AL132898-8|CAB60959.1|  297|Caenorhabditis elegans Hypothetical ...    29   5.3  

>Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical
           protein W08E3.1 protein.
          Length = 160

 Score =  124 bits (298), Expect = 2e-28
 Identities = 55/82 (67%), Positives = 67/82 (81%)
 Frame = +3

Query: 114 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 293
           MTI KNNKM  H+NYR+++ILQD RTFIG FKAFDKHMN++L +CEE R+IK K  K  D
Sbjct: 1   MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTD 60

Query: 294 REEKRTLGFVLLRGENIVSLTI 359
            EEKR LG VL+RGE+IVS+T+
Sbjct: 61  GEEKRILGLVLVRGEHIVSMTV 82


>Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical
           protein ZK593.7 protein.
          Length = 104

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +3

Query: 138 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 317
           + + ++  +RV  Q  R   G  + FD+ +N++L DC E+ +     S   D  E R LG
Sbjct: 16  LTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGD--ETRQLG 73

Query: 318 FVLLRGENI 344
            ++ RG  I
Sbjct: 74  LIVARGTAI 82


>AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical
           protein Y62E10A.12 protein.
          Length = 102

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = +3

Query: 150 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE---FRKIKSKNSKTADREEKRTLGF 320
           ++ RV V +++ R   G  +AFD+H+N++L + EE    R++     +   ++ KR +  
Sbjct: 25  LDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTREVDEDTFEEIYKQTKRVVPM 84

Query: 321 VLLRGENIV 347
           + +RG++++
Sbjct: 85  LFVRGDSVI 93


>AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like
           protein protein 8 protein.
          Length = 98

 Score = 38.7 bits (86), Expect = 0.009
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +3

Query: 138 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLG 317
           +  ++N  V V+  D R  +G  K FD+ +NL++ D  E    +++   T        LG
Sbjct: 5   LDAYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTT------PLG 58

Query: 318 FVLLRGENI 344
             ++RGEN+
Sbjct: 59  LYIIRGENV 67


>Z69302-4|CAA93263.1|  125|Caenorhabditis elegans Hypothetical
           protein F40F8.9 protein.
          Length = 125

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 21/67 (31%), Positives = 37/67 (55%)
 Frame = +3

Query: 144 QHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFV 323
           + ++ ++ V+L+D R  IG  ++ D+  NLIL D  E   ++    +T         GF+
Sbjct: 16  EQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQ-------GFM 68

Query: 324 LLRGENI 344
           L+RGEN+
Sbjct: 69  LIRGENV 75


>Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical
           protein F28F8.3 protein.
          Length = 91

 Score = 37.1 bits (82), Expect = 0.026
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +3

Query: 150 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRTLGFVLL 329
           I  ++ VI+++ +  +GT   FD ++N++L D  E+         TAD +    L  +LL
Sbjct: 22  IGSKIWVIMKNDKEIVGTLTGFDDYVNMVLEDVVEY-------ENTADGKRMTKLDTILL 74

Query: 330 RGENIVSL 353
            G +I  L
Sbjct: 75  NGNHITML 82


>Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical
           protein C52E4.3 protein.
          Length = 118

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
 Frame = +3

Query: 153 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF----RKIKSKNSKTADREEKRTLGF 320
           N++V +  ++++  +G  KAFD+H N++L + +E      K      K     + R +  
Sbjct: 39  NHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISK 98

Query: 321 VLLRGENIV 347
           + LRG++++
Sbjct: 99  MFLRGDSVI 107


>U42436-7|AAO61428.2|  223|Caenorhabditis elegans Hypothetical
           protein C49H3.4 protein.
          Length = 223

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 141 QQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 254
           Q+ I  RVR  ++  R F G    FD+H NL++ D  E
Sbjct: 120 QKRIEVRVRSAIRIDRIFEGIPTTFDEHFNLMMKDVTE 157


>AL132898-8|CAB60959.1|  297|Caenorhabditis elegans Hypothetical
           protein Y59A8B.11 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +3

Query: 21  EFFRFHCXLNIAEAN*SFPNI**YLPNHSDKMTIGKNNKMQ-QHINYRVRVILQDSRTFI 197
           +F   HC +N  + N  F  +       +D   + KN+K+Q + + ++    +Q   TF+
Sbjct: 69  DFSHSHCTVNYNDRNERFKGVNGLKMAETDLSVVMKNSKLQLEVLEFQGYDRIQKKETFM 128

Query: 198 GTFKAFDKHMNL 233
             FK      NL
Sbjct: 129 NWFKEMSDSKNL 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,766,459
Number of Sequences: 27780
Number of extensions: 326517
Number of successful extensions: 826
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3537281262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)