Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L21
         (1283 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    30   0.13 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   0.51 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   2.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   4.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   6.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +2

Query: 914 GGGGXXXXXGGGXXXXGGGXPXXGGGG 994
           GGG      GGG    GG  P  GGGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 27.1 bits (57), Expect = 1.2
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +2

Query: 914  GGGGXXXXXGGGXXXXGGGXPXXGGGGXK 1000
            GG G     GGG    G G    GGGG +
Sbjct: 205  GGSGGGAPGGGGGSSGGPGPGGGGGGGGR 233



 Score = 26.6 bits (56), Expect = 1.6
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 914 GGGGXXXXXGGGXXXXGGGXPXXGGGG 994
           GGGG      GG     GG    GGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGG 229


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 0.51
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +2

Query: 914 GGGGXXXXXGGGXXXXGG-GXPXXGGGG 994
           GGGG     GGG    GG G    GGGG
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGG 680



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 941  GGGXXXXGGGXPXXGGGGXKXXP 1009
            GGG    GGG    GGGG    P
Sbjct: 292  GGGVGGGGGGGGGGGGGGGSAGP 314


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 941  GGGXXXXGGGXPXXGGGGXKXXP 1009
            GGG    GGG    GGGG    P
Sbjct: 292  GGGVGGGGGGGGGGGGGGGSAGP 314



 Score = 24.6 bits (51), Expect = 6.3
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 914 GGGGXXXXXGGGXXXXGGGXPXXGGGG 994
           GGGG      G     GGG    GG G
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSG 866



 Score = 24.2 bits (50), Expect = 8.3
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 914 GGGGXXXXXGGGXXXXGGGXPXXGGGG 994
           GGGG     GGG    G      G GG
Sbjct: 815 GGGGGAGASGGGFLITGDPSDTIGAGG 841


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
            female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 941  GGGXXXXGGGXPXXGGGGXKXXP 1009
            GGG    GGG    GGGG    P
Sbjct: 244  GGGVGGGGGGGGGGGGGGGSAGP 266


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = -1

Query: 992 PPPXXXXXPPPXXXXPPXXGXXPPXP 915
           PP      PPP    PP  G  P  P
Sbjct: 71  PPKPNISIPPPTMNMPPRPGMIPGMP 96


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +2

Query: 914  GGGGXXXXXGGGXXXXGGGXPXXGGGGXK 1000
            G G      GGG    GGG P  GGG  K
Sbjct: 2046 GSGDNGSQHGGGSISGGGGTP--GGGKSK 2072


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,198
Number of Sequences: 2352
Number of extensions: 6887
Number of successful extensions: 94
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147557667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)