Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L19
         (1288 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E23555 Cluster: PREDICTED: hypothetical protein;...    36   2.3  
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031...    36   3.0  
UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Re...    34   6.9  
UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2; Burkholder...    34   9.2  

>UniRef50_UPI0000E23555 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 338

 Score = 35.9 bits (79), Expect = 2.3
 Identities = 23/68 (33%), Positives = 30/68 (44%)
 Frame = -3

Query: 266 SRVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVA 87
           S +Q   P    A L+  + S RV S+A+P+       GR  P  R+ A  A  WG    
Sbjct: 170 SAIQPGPPQPSAATLAASDLSDRV-SLAKPLGARLHRGGRPAPGSRSEAARAGRWGCSCE 228

Query: 86  RGYPWHSP 63
           RG  W  P
Sbjct: 229 RGRAWEPP 236


>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
           OJ1031_C12.31; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
          Length = 214

 Score = 35.5 bits (78), Expect = 3.0
 Identities = 27/73 (36%), Positives = 35/73 (47%)
 Frame = -3

Query: 299 FIYVNSSFTT*SRVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHA 120
           F+ V+  F    RV++KV H   AR SG +  +R  +V RP      V  RRR    A +
Sbjct: 2   FVRVSCMFV---RVRSKVVHVSGARDSGVQWRQRRGAVGRP----GGVGARRRGGAAAAS 54

Query: 119 TPATCWGGRVARG 81
            PA C  G V  G
Sbjct: 55  GPAACGRGGVVEG 67


>UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Rep:
           MKIAA3013 protein - Mus musculus (Mouse)
          Length = 1461

 Score = 34.3 bits (75), Expect = 6.9
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -3

Query: 290 VNSSFTT*SRV--QNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHAT 117
           V SS  T S+   +N VPH    +LS   +  +V +VA+P +   D A + R       +
Sbjct: 789 VESSANTDSKQLSENSVPHSSEDKLSSDPAVEKVETVAQPAESLVDKAPKPRTRRSRFHS 848

Query: 116 PATCW 102
           P+T W
Sbjct: 849 PSTTW 853


>UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2;
           Burkholderia|Rep: Flavoprotein reductase - Burkholderia
           pseudomallei (strain 1710b)
          Length = 421

 Score = 33.9 bits (74), Expect = 9.2
 Identities = 19/40 (47%), Positives = 20/40 (50%)
 Frame = -3

Query: 203 RRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGRVAR 84
           RR +S  RP  RP   A RR    RA A PA C G R  R
Sbjct: 335 RRRSSGTRPTPRPPRDAVRRSAIRRAAARPARCTGARTDR 374


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 846,264,204
Number of Sequences: 1657284
Number of extensions: 14964864
Number of successful extensions: 83508
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60113
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 131604446675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)