Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_L15
(1292 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0648 - 30844289-30844341,30844536-30844648,30845435-308454... 117 2e-26
01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079... 113 2e-25
03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,583... 113 3e-25
01_06_0459 + 29538025-29538579,29539190-29539354,29539448-295395... 111 9e-25
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 105 6e-23
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 104 2e-22
01_06_0917 + 32978306-32978434,32978570-32978645,32979324-329793... 47 4e-05
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 46 6e-05
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225... 42 0.001
07_03_0959 - 22885750-22886001,22886073-22886195,22886343-228864... 40 0.003
07_03_0960 - 22902279-22902530,22902604-22902726,22902855-229029... 38 0.013
06_01_0240 - 1822086-1822216,1822311-1822367,1822788-1822842,182... 33 0.65
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 33 0.65
06_03_0194 + 17775189-17775482,17775793-17775844,17775934-177759... 31 2.0
02_01_0584 - 4326072-4326094,4326306-4326885 31 2.6
03_01_0600 - 4419917-4419967,4420081-4420287,4420386-4420560,442... 30 3.5
08_01_0383 - 3405986-3407359,3409283-3410827 30 4.6
>01_06_0648 - 30844289-30844341,30844536-30844648,30845435-30845484,
30845572-30845642,30845725-30845797,30846744-30846841,
30846936-30847002,30847150-30847230,30847312-30847479,
30847563-30847730,30847813-30848109,30848205-30848426,
30849287-30849325
Length = 499
Score = 117 bits (282), Expect = 2e-26
Identities = 75/246 (30%), Positives = 123/246 (50%)
Frame = +1
Query: 274 GDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFC 453
G+K SQ+ PLP ++ LPP E + T+VTTL NG+++ASE
Sbjct: 39 GEKSSQLPPLDVPLPGIT-----LPPPLPDFV--EPSKTKVTTLPNGIKIASETSVSPAA 91
Query: 454 TAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDT 633
+ G+ ID G YE +G H LE+++F +T + ++RE+E GG SR+
Sbjct: 92 SVGLYIDCGSIYETPASSGASHLLERMAFKSTTN-RSHLRLVREVEAIGGNVSASASREQ 150
Query: 634 TVYATSADSRGLEAVTQVLAEVTLRPILSADEIEAARQAVAFELETLSMRPEQETILMDM 813
Y A + + +VL + P EI+ + + E+ +S P + +L++
Sbjct: 151 MCYTYDAFKAYVPEMVEVLIDSVRNPAFFNWEIKEQLEKIKAEIAEVSDNP--QGLLLEA 208
Query: 814 IHSAAYKGNTLGLPKICPQENVNKXDKGIILNYLKNHYTPXRMVVXAVGVDHEPLVESVQ 993
+HSA Y G L P + PQ +++ D I+ ++ +YT RMV+ A GV+H+ LV +
Sbjct: 209 LHSAGYSG-ALAKPLMAPQSAIHRLDSSILEEFIAENYTAPRMVLAASGVEHDELVSIAE 267
Query: 994 KYLVDI 1011
L D+
Sbjct: 268 PLLSDL 273
>01_07_0301 + 42607239-42607277,42607374-42607577,42607669-42607965,
42608055-42608222,42608393-42608560,42608653-42608733,
42608844-42608910,42609326-42609423,42609665-42609737,
42609826-42609896,42610013-42610062,42610145-42610257,
42610341-42610384
Length = 490
Score = 113 bits (273), Expect = 2e-25
Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Frame = +1
Query: 388 TEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGAT-HKFAT 564
T VTTL NG+RVASE G GV +DSG YE A G+ H LE+LSF T H+
Sbjct: 64 TRVTTLPNGVRVASEDLPGPSACVGVFVDSGSVYETAETAGVSHLLERLSFKDTAHRSHL 123
Query: 565 RDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQVLAEVTLRPILSADEIEAAR 744
+ +++++E GG SR+ TVY+ L +VL + P+ DE+E R
Sbjct: 124 Q--IVQDVEATGGNIGASASREQTVYSYETLKAYLPQAIEVLIDCVRNPLFLQDEVE--R 179
Query: 745 QAVAFELETLSMRPEQETILMDMIHSAAYKGNTLGLPKICPQENVNKXDKGIILNYLKNH 924
Q E ++ E L + ++ Y G L P + P+E++ + + II + +
Sbjct: 180 QVAFAREEVQELQKNPERFLQESLNLVGYTG-ALANPLVAPEESLTRINGSIIQKFYHEN 238
Query: 925 YTPXRMVVXAVGVDHEPLVESVQKYLVD 1008
+T R+VV A GVDH+ L++ + L D
Sbjct: 239 FTADRLVVAASGVDHQYLLDVAEPLLSD 266
>03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,
5839496-5839647,5839754-5839862,5840551-5840649,
5840739-5840804,5840891-5840998,5841820-5841906
Length = 533
Score = 113 bits (272), Expect = 3e-25
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 2/210 (0%)
Frame = +1
Query: 388 TEVTTLSNGLRVASEKKFG-QFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFAT 564
T VTTL NGLRVA+E + T GV ID+G RYE G+ HF+E + F T
Sbjct: 99 TRVTTLPNGLRVATESSLASRTATVGVWIDAGSRYETEDSAGVAHFVEHMLFKGTGDRNA 158
Query: 565 RDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQVLAEVTLRPILSADEIEAAR 744
+ E+E GG + SR+ T Y + + +LA++ L IE R
Sbjct: 159 AQLE-EEIENIGGHLNAYTSREQTTYYAKVLDKDVPRALNILADILQHSKLEESRIERER 217
Query: 745 QAVAFELETLSMRPEQETILMDMIHSAAYKGNTLGLPKICPQENVNKXDKGIILNYLKNH 924
+ E+E + + E ++ D +H+ A++ +LG P + ENV + + Y++ H
Sbjct: 218 DVILREME--EVEGQYEEVIFDHLHATAFQYTSLGRPILGSAENVKSITQEDLQKYIETH 275
Query: 925 YTPXRMVVXAVG-VDHEPLVESVQKYLVDI 1011
YT RMV+ A G V H+ +VE K D+
Sbjct: 276 YTAPRMVITAAGAVKHDDIVEMATKLFNDL 305
>01_06_0459 +
29538025-29538579,29539190-29539354,29539448-29539585,
29539685-29539836,29539949-29540057,29540281-29540379,
29541051-29541116,29541208-29541315,29541428-29541553
Length = 505
Score = 111 bits (268), Expect = 9e-25
Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 3/205 (1%)
Frame = +1
Query: 394 VTTLSNGLRVASEK--KFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATR 567
V+TL GLR+ ++ + + GV +D+G R+E+ NG HFLE ++F T + T
Sbjct: 58 VSTLPTGLRIVTQAYPAATRMASVGVWVDAGSRFELPGTNGTAHFLEHMAFKGTTRRPTA 117
Query: 568 DVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQVLAEVTLRPILSADEIEAARQ 747
+ + E+E G + SR+ T Y R + VL+++ P A+ ++ R
Sbjct: 118 NALEVEIENMGARLNAYTSREQTTYFADVQGRDVPIALDVLSDILQYPCFPANALQRERG 177
Query: 748 AVAFELETLSMRPEQETILMDMIHSAAYKGNTLGLPKICPQENVNKXDKGIILNYLKNHY 927
+ E+E ++ + ++ D +H+AA++G+ LG + P EN+ K + Y+ HY
Sbjct: 178 VILREME--EVQGMMDEVIFDHLHAAAFQGHPLGDTILGPVENIKSISKKDLEQYITTHY 235
Query: 928 TPXRMVVXAVG-VDHEPLVESVQKY 999
T RMVV A G V+H+ +V+ V+++
Sbjct: 236 TCPRMVVSAAGAVNHDEVVDQVREF 260
>01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 105 bits (253), Expect = 6e-23
Identities = 67/243 (27%), Positives = 120/243 (49%)
Frame = +1
Query: 283 LSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAG 462
L+ + + P P + + +PP L + +T ++TTL+NG+++ASE G C+ G
Sbjct: 44 LTGARSNALPPPDFTLPGVTIPPPLPDLVEPGKT--KITTLANGVKIASETTPGPSCSVG 101
Query: 463 VVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVY 642
V ++ G +E G L+K+++ T + V +RE+E GG +R+ Y
Sbjct: 102 VYVNCGSVHEAPETLGATQLLKKMAYTTTTNRSHLRV-VREIEAVGGNVKASANREMMSY 160
Query: 643 ATSADSRGLEAVTQVLAEVTLRPILSADEIEAARQAVAFELETLSMRPEQETILMDMIHS 822
+ +A + + +VL + P E++ + EL S P ET L++ +HS
Sbjct: 161 SYAALKTYMPEMVEVLIDCVRNPAFLDWEVKEQIMKLKAELAEASSNP--ETFLLEALHS 218
Query: 823 AAYKGNTLGLPKICPQENVNKXDKGIILNYLKNHYTPXRMVVXAVGVDHEPLVESVQKYL 1002
Y G L P I + +V++ + ++ +L +YT R+V+ A GVDH+ LV + L
Sbjct: 219 TGYSG-ALATPLIASESSVSRLNTNVLEYFLAENYTAPRIVLAATGVDHDELVSIAEPLL 277
Query: 1003 VDI 1011
D+
Sbjct: 278 SDM 280
>05_06_0132 + 25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 104 bits (249), Expect = 2e-22
Identities = 70/241 (29%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
Frame = +1
Query: 298 GSVTPLPPLSEAMLNL---PPVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVV 468
G+ + LPPL + + PP+ + S+ T++TTL NG+++ASE + G+
Sbjct: 92 GNSSQLPPLDVPLPGVIISPPLPDFVEPSK---TKITTLPNGIKIASETSPIPAVSVGLY 148
Query: 469 IDSGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYAT 648
ID G YE + +G H LE+++F +T + ++RE+E GG SR+ Y
Sbjct: 149 IDCGSVYETSSSSGTSHLLERMAFKSTTN-RSHLRLVREVEAIGGNVFASASREQMSYTY 207
Query: 649 SADSRGLEAVTQVLAEVTLRPILSADEIEAARQAVAFELETLSMRPEQETILMDMIHSAA 828
A + +VL + P E++ Q + E+ +S P +LM+ +HSA
Sbjct: 208 DALKCYAPEMVEVLIDSVRNPAFLEWEVKEQLQKIKSEISEVSGDP--HGLLMEALHSAG 265
Query: 829 YKGNTLGLPKICPQENVNKXDKGIILNYLKNHYTPXRMVVXAVGVDHEPLVESVQKYLVD 1008
Y G L P + + VN+ D + ++ +YT RMV+ A G++H+ LV + L D
Sbjct: 266 YSG-ALAKPLMASESAVNRLDVATLEEFVSENYTAPRMVLAASGIEHDELVSVAEPLLSD 324
Query: 1009 I 1011
+
Sbjct: 325 L 325
>01_06_0917 +
32978306-32978434,32978570-32978645,32979324-32979391,
32979868-32979959,32980121-32980194,32980372-32980415,
32980752-32980803,32981200-32981319,32981391-32981503,
32981674-32981761,32982144-32982229,32982832-32982918,
32983149-32983252,32983607-32983709,32983861-32983956,
32984067-32984256,32984352-32984413,32984560-32984664,
32985163-32985364,32985473-32985681,32986413-32986537,
32986644-32986695,32986772-32986858,32987125-32987247,
32987375-32987629
Length = 913
Score = 46.8 bits (106), Expect = 4e-05
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +1
Query: 508 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQV 687
G+ HFLE + F A+ K+ + + + HGG CD +TT + ++ E
Sbjct: 63 GLAHFLEHMLFYASEKYPGENDYSKYMIEHGGYCDAYTYSETTTFFFYVNAANFEEALDR 122
Query: 688 LAEVTLRPILSADEIEAARQAVAFE 762
A+ ++P++S D + +AV E
Sbjct: 123 FAQFFIKPLMSQDAVLREIKAVDSE 147
>01_06_0916 +
32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 46.0 bits (104), Expect = 6e-05
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = +1
Query: 508 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQV 687
G+ HFLE + F A+ K+ + + HGG C+ S +TT + + E
Sbjct: 571 GLAHFLEHMLFYASEKYPGEQDYTKYITEHGGSCNAYTSSETTNFYFDVNVANFEEALDR 630
Query: 688 LAEVTLRPILSADEIEAARQAVAFE 762
A+ ++P++S D + +AV E
Sbjct: 631 FAQFFIKPLMSQDAVLREIKAVDSE 655
>07_03_0961 -
22921761-22921850,22922204-22922338,22922409-22922531,
22922621-22922707,22922780-22922831,22922939-22923063,
22923724-22923932,22924206-22924407,22924526-22924630,
22925353-22925414,22925755-22925944,22926017-22926112,
22926203-22926305,22927019-22927122,22927264-22927395,
22928257-22928343,22929121-22929206,22929291-22929383,
22932197-22932284,22932402-22932514,22932621-22932743,
22934153-22934204,22934365-22934408,22934498-22934571,
22934655-22934746,22935594-22935661,22937146-22937221,
22937323-22937679
Length = 1055
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 508 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQV 687
G+ HFLE + F A+ K+ D + + HGG + SR+ T + ++ L+
Sbjct: 139 GLAHFLEHMLFYASEKYPIEDSYSKYIAEHGGSRNAFTSREHTNFFFDVNNDCLDDALDR 198
Query: 688 LAEVTLRPILSADEIEAARQAVAFE 762
A+ + P++S D I AV E
Sbjct: 199 FAQFFINPLMSPDAILREVNAVDSE 223
>07_03_0959 -
22885750-22886001,22886073-22886195,22886343-22886429,
22886504-22886555,22886701-22886825,22887002-22887213,
22887317-22887518,22887928-22888032,22889643-22889704,
22889998-22890187,22890260-22890355,22890442-22890544,
22891448-22891551,22893284-22893370,22894033-22894118,
22894397-22894489,22895615-22895777,22895899-22896011,
22896113-22896235,22897393-22897444,22897843-22897886,
22897975-22898048,22898133-22898224,22899374-22899441,
22900817-22900892,22900952-22901215
Length = 1015
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 508 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQV 687
G+ HFLE + F A+ K+ D + + HGG + R+ T + ++ L+
Sbjct: 108 GLAHFLEHMLFYASEKYPVEDDYSKYIAEHGGSTNAFTCRERTNFYFDVNNSCLDDALDR 167
Query: 688 LAEVTLRPILSAD 726
A+ ++P++S D
Sbjct: 168 FAQFFIKPLISPD 180
>07_03_0960 -
22902279-22902530,22902604-22902726,22902855-22902941,
22903017-22903068,22903197-22903321,22903476-22903684,
22903990-22904191,22906205-22906309,22907264-22907325,
22907625-22907814,22907887-22907982,22908069-22908171,
22909117-22909220,22910239-22910325,22911238-22911323,
22911410-22911502,22912586-22912673,22912786-22912898,
22912989-22913111,22914473-22914524,22915185-22915286,
22915539-22915582,22915667-22915740,22915825-22915916,
22916566-22916633,22918572-22918647,22918767-22918952
Length = 997
Score = 38.3 bits (85), Expect = 0.013
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 508 GICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQV 687
G+ HFLE + F A+ K+ D + + HGG + + + T + + L
Sbjct: 82 GLAHFLEHMLFYASEKYPIEDSYSKYITEHGGSTNAFTTCEHTNFFFDVNHDCLNDALDR 141
Query: 688 LAEVTLRPILSAD 726
A+ ++P+LSAD
Sbjct: 142 FAQFFIKPLLSAD 154
>06_01_0240 -
1822086-1822216,1822311-1822367,1822788-1822842,
1824585-1824674,1824848-1824995,1825095-1825351
Length = 245
Score = 32.7 bits (71), Expect = 0.65
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1
Query: 676 VTQVLAEVTLRPILSADEIEAARQAV 753
VT V +E L+PILSADE+ RQ+V
Sbjct: 164 VTTVTSESLLKPILSADEVSGMRQSV 189
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 32.7 bits (71), Expect = 0.65
Identities = 21/102 (20%), Positives = 41/102 (40%)
Frame = +1
Query: 457 AGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTT 636
A + + G + G+ HFLE + F + +F + L +HGG + + T
Sbjct: 122 AAMCVGMGSFADPPKAQGLAHFLEHMLFMGSSEFPDENEYDSYLSKHGGSSNAFTETEYT 181
Query: 637 VYATSADSRGLEAVTQVLAEVTLRPILSADEIEAARQAVAFE 762
Y L+ ++ + P++ A+ ++ AV E
Sbjct: 182 CYHFEVKREYLKGALDRFSQFFVSPLVKAEAMDREILAVDSE 223
>06_03_0194 +
17775189-17775482,17775793-17775844,17775934-17775959,
17776525-17776869,17777231-17777287
Length = 257
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 571 VMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQVLAEV 699
V+++ R GG DC ++ AT AD+R L AV L ++
Sbjct: 48 VVVKGWRRQGGCGDCGLEQEAAAAATMADARSLHAVRAALEDL 90
>02_01_0584 - 4326072-4326094,4326306-4326885
Length = 200
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -1
Query: 680 VTASNPLESALVAYT--VVSREPWQSHIP 600
V A+ P SA+VA T V +R PWQS +P
Sbjct: 20 VAAAGPSSSAVVASTASVAARSPWQSPVP 48
>03_01_0600 -
4419917-4419967,4420081-4420287,4420386-4420560,
4420677-4420708,4421179-4421280,4421406-4421552
Length = 237
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +1
Query: 730 IEAARQAVAFELETLSMRPEQETILMDMIHSAAYKGNTLGLPKICPQENVNKXDKGIIL 906
+EAAR+A ELE+ + PE + + M+HS +G LGLP+ + + K D + L
Sbjct: 117 LEAARKAE--ELES-QLDPEFPSFVKPMLHSHVVRGFWLGLPRHFCETYLPKHDAIVTL 172
>08_01_0383 - 3405986-3407359,3409283-3410827
Length = 972
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 238 APKWNIRKFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKY 360
A W IR FS++ D+L + K + P + A ++PP++Y
Sbjct: 933 AKSWGIRYFSKNFDRLVRAKTMIDPENVFNNAQ-SIPPLQY 972
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,374,844
Number of Sequences: 37544
Number of extensions: 553998
Number of successful extensions: 1276
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4027319592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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