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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L14
         (1230 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523...   301   9e-82
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473...   298   5e-81
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707...   296   2e-80
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607...   214   8e-60
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026...   220   2e-57
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351...   200   2e-51
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117...   167   1e-41
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532...    31   1.9  
08_01_0017 + 132109-132924                                             31   2.5  
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595     30   4.3  
08_01_0680 - 5958066-5960253,5960707-5961503                           30   4.3  
07_03_0999 - 23216665-23217419,23217626-23217956                       30   4.3  
06_03_0334 - 19660526-19661755                                         30   4.3  
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848...    29   5.7  
11_04_0444 + 17816207-17817436                                         29   7.5  
05_07_0266 - 28790917-28791307,28791565-28791714,28792201-28792673     29   9.9  
03_06_0416 - 33780911-33781861                                         29   9.9  
03_02_0637 - 10009580-10009903,10013314-10014153                       29   9.9  
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465...    29   9.9  

>05_01_0585 -
           5237547-5237930,5237995-5238072,5238163-5238405,
           5238515-5238661,5238780-5238863,5238969-5239040,
           5239153-5239248,5239345-5239410,5239537-5239642,
           5239749-5239900,5240238-5240433,5240791-5240879
          Length = 570

 Score =  301 bits (738), Expect = 9e-82
 Identities = 138/236 (58%), Positives = 176/236 (74%)
 Frame = +3

Query: 144 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 323
           SG   L+ P  NKG+AF+  ER    + GLLPP + +QE Q +    ++  Y  PL +YI
Sbjct: 30  SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPLQRYI 89

Query: 324 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 503
            +M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG +
Sbjct: 90  AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKI 149

Query: 504 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 683
            +VLKNWPE  ++ IVVTDGERILGLGDLG  GMGIPVGKL+LYTALGG++P  CLPITI
Sbjct: 150 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITI 209

Query: 684 DVGTNTQSMLDDPLYIGLRQRRVRGPDYDELXDEFMRAVVRRYGQNCLVXFEDFGN 851
           DVGTN +S+L+D  YIGL+QRR  G +Y EL +EFM AV + YG+  LV FEDF N
Sbjct: 210 DVGTNNESLLNDEFYIGLKQRRATGEEYHELLEEFMTAVKQNYGEKVLVQFEDFAN 265


>01_01_0629 -
           4738519-4738607,4738700-4738828,4738921-4739011,
           4739103-4739177,4739529-4739618,4739742-4739840,
           4739934-4739987,4740084-4740131,4740232-4740330,
           4740458-4740541,4740650-4740721,4740812-4740907,
           4741012-4741077,4741148-4741253,4741350-4741501,
           4741634-4741708,4741792-4741912,4742968-4743209,
           4743328-4743381
          Length = 613

 Score =  298 bits (732), Expect = 5e-81
 Identities = 135/236 (57%), Positives = 179/236 (75%)
 Frame = +3

Query: 144 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 323
           SG   L+ P  NKG+AF+ +ER    + GLLPP V +Q+ QV+    ++ +Y  PL +Y+
Sbjct: 99  SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYM 158

Query: 324 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 503
            +M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+GL++++ DKG V
Sbjct: 159 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKV 218

Query: 504 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 683
            DVL+NWPE +++ IVVTDGERILGLGDLG  GMGIPVGKL+LYTALGG++P  CLPITI
Sbjct: 219 LDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITI 278

Query: 684 DVGTNTQSMLDDPLYIGLRQRRVRGPDYDELXDEFMRAVVRRYGQNCLVXFEDFGN 851
           DVGTN + +L+D  YIGLRQRR  G +Y EL +EFM AV + YG+  L+ FEDF N
Sbjct: 279 DVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFAN 334


>01_06_0670 +
           31069976-31070073,31070461-31070581,31070669-31070743,
           31070863-31071014,31071171-31071276,31071409-31071474,
           31071562-31071657,31071764-31071835,31071925-31072008,
           31072147-31072245,31072721-31072768,31072857-31072910,
           31072991-31073089,31073182-31073271,31073371-31073448,
           31073584-31073658,31073806-31073896,31074014-31074142,
           31074235-31074323
          Length = 573

 Score =  296 bits (727), Expect = 2e-80
 Identities = 134/236 (56%), Positives = 177/236 (75%)
 Frame = +3

Query: 144 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 323
           SG   L+ P  NKG++FT +ER    + GLLPP V +QE Q +    ++ +++ PL +Y+
Sbjct: 33  SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYM 92

Query: 324 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 503
            LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+GL+I++ +KG +
Sbjct: 93  ALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRI 152

Query: 504 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 683
            ++L+NWPE  ++ IVVTDGERILGLGDLG  GMGIPVGKLALYTALGG++P  CLPITI
Sbjct: 153 LELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITI 212

Query: 684 DVGTNTQSMLDDPLYIGLRQRRVRGPDYDELXDEFMRAVVRRYGQNCLVXFEDFGN 851
           DVGTN + +L D  YIGLRQ+R  G +Y +L DEFM A+ + YGQ  LV FEDF N
Sbjct: 213 DVGTNNEDLLKDEFYIGLRQKRATGQEYSDLLDEFMAAIKQNYGQKVLVQFEDFAN 268



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 857 AFRLLXKYRNKYXTFNDNIXGT 922
           AF LL KYR     FND+I GT
Sbjct: 271 AFTLLEKYRANNLVFNDDIQGT 292


>01_06_0551 +
           30159789-30159946,30160509-30160629,30160714-30160788,
           30160877-30161028,30161103-30161208,30161298-30161363,
           30161623-30161694,30161849-30161932,30162108-30162206,
           30162841-30162888,30162986-30163039,30163137-30163235,
           30163321-30163410,30163503-30163580,30163699-30163773,
           30163866-30163956,30164282-30164410,30164501-30164589
          Length = 561

 Score =  214 bits (523), Expect(2) = 8e-60
 Identities = 97/172 (56%), Positives = 129/172 (75%)
 Frame = +3

Query: 144 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 323
           SG + L+ P  NKG+AF   ER+   + GLLPP + +QE Q      +I +Y+ PL KY+
Sbjct: 53  SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPLQKYM 112

Query: 324 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 503
            +M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+GL+I++ +KG +
Sbjct: 113 AMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGLYISLKEKGKI 172

Query: 504 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKP 659
            +VLKNWPE  ++ IVVTDGERILGLGDLG  GMGIPVGKLALYTALGG++P
Sbjct: 173 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRP 224



 Score = 35.5 bits (78), Expect(2) = 8e-60
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 762 DYDELXDEFMRAVVRRYGQNCLVXFEDFGN 851
           +Y +   EFM AV + YG+  L+ FEDF N
Sbjct: 227 EYADFLHEFMTAVKQNYGEKVLIQFEDFAN 256


>10_08_0551 +
           18702081-18702251,18702328-18702424,18702533-18702651,
           18702757-18702924,18703296-18703424,18703659-18703719,
           18703813-18703916,18704173-18704279,18704319-18704493,
           18704657-18704770,18704883-18704966,18705536-18705608,
           18705689-18705775,18705863-18705917,18706007-18706078,
           18706470-18706532,18706640-18706754,18706844-18706915
          Length = 621

 Score =  220 bits (537), Expect = 2e-57
 Identities = 111/232 (47%), Positives = 145/232 (62%), Gaps = 10/232 (4%)
 Frame = +3

Query: 147 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 305
           G D L  P  NK  AF + ER  LG+ GLLPPRV + E+Q +    S    E+       
Sbjct: 46  GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPD 105

Query: 306 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLF 476
               L K+  L  L DRNE L+YR + DN+ +  PI+YTPTVGL C+ +  ++RRPRG++
Sbjct: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165

Query: 477 ITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIK 656
            +  DKG +  ++ NWP   V  IVVTDG RILGLGDLG  G+GIP+GKL +Y A  GI 
Sbjct: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGIN 225

Query: 657 PHQCLPITIDVGTNTQSMLDDPLYIGLRQRRVRGPDYDELXDEFMRAVVRRY 812
           P + LPI +DVGTN   +L+D LY+GLRQ R+ G +Y  + DEFM AV  R+
Sbjct: 226 PQKVLPIMLDVGTNNTKLLEDKLYLGLRQPRLEGEEYLSVVDEFMEAVHARW 277


>07_03_0474 +
           18534071-18534238,18534349-18534445,18534992-18535122,
           18535191-18535286,18535459-18535464,18535521-18535688,
           18535892-18536020,18536613-18536673,18536928-18537031,
           18537137-18537220,18538433-18538461,18538506-18538617,
           18539200-18539313,18539767-18539832,18540237-18540309,
           18540396-18540482,18540710-18540764,18540869-18540940,
           18541039-18541101,18541177-18541294,18541377-18541451
          Length = 635

 Score =  200 bits (488), Expect = 2e-51
 Identities = 112/263 (42%), Positives = 152/263 (57%), Gaps = 10/263 (3%)
 Frame = +3

Query: 87  ERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQL------LGIHGLLPPRV 248
           ERDR+GL G       S    +D    P L     F  E + +      L    + P   
Sbjct: 64  ERDRLGLRGLLPPNVVSSQQQIDRFT-PTLKYQYKFHSEIQHIDAKGLALNYLNISPAIC 122

Query: 249 KTQEEQVELCKLSIDRYEN--PLNKYIYLMGLLDRNEHLFYR--FVADNVAEMMPIVYTP 416
           ++ +  V   K + D   +  PL K+  L  L DRNE ++Y+   + DN+ E  PIVYTP
Sbjct: 123 ESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRNETMYYKAEVLIDNIEEHAPIVYTP 182

Query: 417 TVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGA 596
           TVGL CQ +  ++RRPRG++ +  D+G +  ++ NWP   V  IVVTDG RILGLGDLG 
Sbjct: 183 TVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGV 242

Query: 597 CGMGIPVGKLALYTALGGIKPHQCLPITIDVGTNTQSMLDDPLYIGLRQRRVRGPDYDEL 776
            G+GI +GKL LY A  GI P + LP+ IDVGTN + +L DPLY+GL++ R+ G +Y  +
Sbjct: 243 HGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLKDPLYLGLQEHRLEGEEYVAI 302

Query: 777 XDEFMRAVVRRYGQNCLVXFEDF 845
            DEFM AV  R+  N +V FEDF
Sbjct: 303 IDEFMEAVFARW-PNVIVQFEDF 324



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +3

Query: 147 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 272
           G D L  P  N+G  F++ ER  LG+ GLLPP V + ++Q++
Sbjct: 45  GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86



 Score = 29.9 bits (64), Expect = 4.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 845 RERXAFRLLXKYRNKYXTFNDNI 913
           + + AFRLL +YR  Y  FND++
Sbjct: 325 QSKWAFRLLQRYRKTYRMFNDDV 347


>02_05_0228 -
           27010982-27011272,27011401-27011506,27011616-27011767,
           27011919-27011930
          Length = 186

 Score =  167 bits (407), Expect = 1e-41
 Identities = 70/105 (66%), Positives = 91/105 (86%)
 Frame = +3

Query: 342 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 521
           +R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5   ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64

Query: 522 WPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIK 656
           WPE  ++ IV+TDGERILGLGDLG  GMGIPVGKL+LYTALGG++
Sbjct: 65  WPERSIQVIVITDGERILGLGDLGCQGMGIPVGKLSLYTALGGVR 109


>05_05_0165 +
           22851863-22852566,22852811-22852964,22853112-22853261,
           22853769-22853930,22854070-22854242,22854330-22854396,
           22854556-22854722,22855216-22855374,22856187-22856276,
           22856392-22856483,22856587-22856681,22857328-22857405,
           22858364-22858459,22859132-22859206,22859290-22859381,
           22859462-22859624,22859734-22859794,22860016-22860116,
           22860567-22860614
          Length = 908

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 184 PLLRPGCLRWSRPERPL--VGCPSPEPHNPIRSRSIS 80
           PL  PGC R  R  R L  +  PSP P +  RS+S+S
Sbjct: 22  PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58


>08_01_0017 + 132109-132924
          Length = 271

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -3

Query: 319 YLLSGFSYLSIESLHSSTCSSC 254
           YL +GFS+ S +S HSSTCS C
Sbjct: 84  YLSAGFSFASRDS-HSSTCSCC 104


>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
          Length = 514

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 220 PKS*RSSMVKAMPLLRPGCLRWSRPERPLVG-CPSPEPHNPIRS 92
           P+S  SS  K +PL RP     SRPE P      S  P  P  S
Sbjct: 217 PQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260


>08_01_0680 - 5958066-5960253,5960707-5961503
          Length = 994

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 66  KCTYXEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGL 176
           K  Y E  R+ IG WGSG      G+  + HL +  L
Sbjct: 380 KKEYWESIRNSIGTWGSGTNPTLEGMRQILHLSYKDL 416


>07_03_0999 - 23216665-23217419,23217626-23217956
          Length = 361

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 618 PLGCPSRMRPSRPDPEYVLRRLQQWHGRPSPAS 520
           P G PS  +P R  P +   + Q+++G+P+P S
Sbjct: 51  PFGPPSNYQPYRHPPIFQGAQQQEYYGQPTPGS 83


>06_03_0334 - 19660526-19661755
          Length = 409

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 618 PLGCPSRMRPSRPDPEYVLRRLQQWHGRPSPAS 520
           P G PS  +P R  P +   + Q+++G+P+P S
Sbjct: 51  PFGPPSNYQPYRHPPIFQGAQQQEYYGQPTPGS 83


>10_05_0042 +
           8481227-8481764,8482291-8482418,8483349-8483933,
           8484033-8484061,8485221-8485612,8486038-8486454,
           8486587-8486668,8487116-8487686
          Length = 913

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -2

Query: 602 PACAQVAQTQNTFSVGYNNGTDVRLRPVLKNIVYMSLIVDRDEEAPWSAVHKPELLTGQA 423
           P C Q+A +   +  G      V++R     + ++ L +DR +E P   + +P L T  A
Sbjct: 254 PMCLQLADSSVRYPAGIAEDVPVKIRDFFIPVDFVVLDMDRGKETP-LILGRPFLSTAGA 312

Query: 422 N 420
           N
Sbjct: 313 N 313


>11_04_0444 + 17816207-17817436
          Length = 409

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 618 PLGCPSRMRPSRPDPEYVLRRLQQWHGRPSPAS 520
           P G PS  +P R  P +   + Q ++G+P+P S
Sbjct: 51  PFGPPSNYQPYRHPPIFQGAQQQDYYGQPTPGS 83


>05_07_0266 - 28790917-28791307,28791565-28791714,28792201-28792673
          Length = 337

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = -1

Query: 612 GCPSRMRPSRPDPEYVLRRLQQWHGRPSPASS*EHR----IHVPYRG 484
           G   R+  S  DP  V+   +  H  PSP S   HR    +HV  RG
Sbjct: 219 GVKKRVERSEQDPSMVITTYEGQHTHPSPVSYHMHRQQGLMHVSARG 265


>03_06_0416 - 33780911-33781861
          Length = 316

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = -1

Query: 474 RGPLVGGTQARTSDRPGQPSECTQLASFQPRYPRRNGRTDAHCGPRAP 331
           R P  GGT +R +  P  P+         P  P R GR      PRAP
Sbjct: 17  RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63


>03_02_0637 - 10009580-10009903,10013314-10014153
          Length = 387

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 704 LGVRTHVDSDGQTLMRLDASERGVE-REFAHW 612
           LGV +H D  G T++ +D   RG++ +   HW
Sbjct: 230 LGVASHSDPGGMTMLLVDDHVRGLQVKNAGHW 261


>03_01_0633 -
           4649267-4649383,4649480-4649641,4649735-4649895,
           4650056-4650080,4650155-4650237,4650332-4650704
          Length = 306

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 618 GKLALYTALGGIKPHQCLPITIDVGTNTQSMLD 716
           GK  + +  GG+KP Q +PI  D   N +  LD
Sbjct: 241 GKCVMGSLFGGVKPKQDIPILADKYLNKELELD 273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,893,559
Number of Sequences: 37544
Number of extensions: 623381
Number of successful extensions: 1854
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1851
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3782886900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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