Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L13
         (1312 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0046 + 4533959-4533988,4534061-4534136,4534225-4535111,454...    31   2.0  
04_01_0580 - 7539208-7539328,7539409-7539579,7539658-7540024,754...    30   3.5  
01_06_0191 - 27334412-27335155                                         30   4.6  
04_03_0049 - 10158876-10159381,10159823-10159904                       29   6.1  
03_06_0195 + 32256771-32258792                                         29   8.1  

>10_02_0046 +
           4533959-4533988,4534061-4534136,4534225-4535111,
           4546711-4546746
          Length = 342

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 18/86 (20%), Positives = 33/86 (38%)
 Frame = +2

Query: 104 RLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRT 283
           R +E  ++ P  +K     D        V  + D     + E  K  ++    +  + RT
Sbjct: 97  RKREQAKSAPQKRKAPASTDSDADDEDTVDDQYDEEEGEDEEEAKVAVEPAANEPADNRT 156

Query: 284 SKKTLTPSNKVSEVVTKPTNNNDPVK 361
                TP+     VVT   +N+ P++
Sbjct: 157 ETHGYTPTPSPDHVVTGVESNSSPLR 182


>04_01_0580 -
           7539208-7539328,7539409-7539579,7539658-7540024,
           7540093-7540516
          Length = 360

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/63 (23%), Positives = 32/63 (50%)
 Frame = +2

Query: 488 FHEWFRELFRSFERVKCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESEHNMNDESD 667
           F +W ++L    +R +  TAP  R  +     P+ PP  +       +++S+++M+   D
Sbjct: 66  FIQWPKDLIEIRDRARPTTAPSGRPPKRPDSAPLAPPAQD-RHAQSYNVQSQYDMDFGED 124

Query: 668 RSD 676
           R++
Sbjct: 125 RTE 127


>01_06_0191 - 27334412-27335155
          Length = 247

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 326 VTKPTNNNDPVKTGYDEITIANFLQSLR 409
           +T  TNNN  V TG  E+T+ N L +++
Sbjct: 143 ITSTTNNNVNVSTGVVEVTVTNALSAVK 170


>04_03_0049 - 10158876-10159381,10159823-10159904
          Length = 195

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +3

Query: 432 SKLPQHR-RE*VWTVIPHLTSTNGSGNFLDH 521
           S++P++R +E +W+V+P+ TS  G G    H
Sbjct: 2   SEVPRNRHQEKIWSVLPNPTSNGGEGESTSH 32


>03_06_0195 + 32256771-32258792
          Length = 673

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 599 TVEFEQTNEEDIESEHNMNDESDRSDDIVLITNKRDSALNVLDKTNETN 745
           T + E  ++ED ES  + +DE D  DD   + +      +  DK    N
Sbjct: 213 TTDLESDSDEDTESTESSHDEDDLDDDDESLDDDGSECFDEEDKIGTEN 261


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,264,165
Number of Sequences: 37544
Number of extensions: 444395
Number of successful extensions: 1404
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4097157504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)