Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_L13
(1312 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050058-1|AAH50058.1| 703|Homo sapiens SPECC1 protein protein. 36 0.43
BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with calp... 36 0.43
AY816327-1|AAW30000.1| 987|Homo sapiens structure protein NSP5a... 36 0.43
AY816326-1|AAW29999.1| 709|Homo sapiens structure protein NSP5a... 36 0.43
EU069463-1|ABU25227.1| 1250|Homo sapiens Plk1-interacting checkp... 34 1.00
BC111486-1|AAI11487.1| 1250|Homo sapiens excision repair cross-c... 34 1.00
AK074719-1|BAC11160.1| 1106|Homo sapiens protein ( Homo sapiens ... 34 1.00
AY816329-1|AAW30002.1| 1068|Homo sapiens structure protein NSP5b... 32 4.0
BC093018-1|AAH93018.1| 631|Homo sapiens coiled-coil domain cont... 31 7.0
BC028609-1|AAH28609.2| 631|Homo sapiens coiled-coil domain cont... 31 7.0
AK025611-1|BAB15188.1| 575|Homo sapiens protein ( Homo sapiens ... 31 7.0
AC009303-1|AAX93279.1| 558|Homo sapiens unknown protein. 31 7.0
AB209993-1|BAE06075.1| 660|Homo sapiens FLJ10996 variant protei... 31 7.0
AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b... 31 9.3
AC110299-3|AAY14682.1| 300|Homo sapiens unknown protein. 31 9.3
AB018336-1|BAA34513.2| 1055|Homo sapiens KIAA0793 protein protein. 31 9.3
>BC050058-1|AAH50058.1| 703|Homo sapiens SPECC1 protein protein.
Length = 703
Score = 35.5 bits (78), Expect = 0.43
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 143 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 322
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 323 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 424
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with
calponin homology and coiled-coil domains 1 protein.
Length = 987
Score = 35.5 bits (78), Expect = 0.43
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 143 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 322
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 323 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 424
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>AY816327-1|AAW30000.1| 987|Homo sapiens structure protein NSP5a3b
protein.
Length = 987
Score = 35.5 bits (78), Expect = 0.43
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 143 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 322
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 323 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 424
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>AY816326-1|AAW29999.1| 709|Homo sapiens structure protein NSP5a3a
protein.
Length = 709
Score = 35.5 bits (78), Expect = 0.43
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 143 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 322
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 323 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 424
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>EU069463-1|ABU25227.1| 1250|Homo sapiens Plk1-interacting
checkpoint helicase protein.
Length = 1250
Score = 34.3 bits (75), Expect = 1.00
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 356 VKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRISMDSDTTLNFHEWFRE-LFRSFERV 532
VK D + ++++Q R QK + ++ + K M+ T N W RE +F S +
Sbjct: 684 VKEELDVVEESHYIQQ-RVQKAQFLVEFESQNKEFLMEQQRTRNEGAWLREPVFPSSTKK 742
Query: 533 KCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
KC + P P P + T EEDI S+
Sbjct: 743 KCPKLNK--------PQPQPSPLLSTHHTQEEDISSK 771
>BC111486-1|AAI11487.1| 1250|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1250
Score = 34.3 bits (75), Expect = 1.00
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 356 VKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRISMDSDTTLNFHEWFRE-LFRSFERV 532
VK D + ++++Q R QK + ++ + K M+ T N W RE +F S +
Sbjct: 684 VKEELDVVEESHYIQQ-RVQKAQFLVEFESQNKEFLMEQQRTRNEGAWLREPVFPSSTKK 742
Query: 533 KCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
KC + P P P + T EEDI S+
Sbjct: 743 KCPKLNK--------PQPQPSPLLSTHHTQEEDISSK 771
>AK074719-1|BAC11160.1| 1106|Homo sapiens protein ( Homo sapiens
cDNA FLJ90238 fis, clone NT2RM2000632, weakly similar to
EXCISION REPAIR PROTEIN ERCC-6. ).
Length = 1106
Score = 34.3 bits (75), Expect = 1.00
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 356 VKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRISMDSDTTLNFHEWFRE-LFRSFERV 532
VK D + ++++Q R QK + ++ + K M+ T N W RE +F S +
Sbjct: 540 VKEELDVVEESHYIQQ-RVQKAQFLVEFESQNKEFLMEQQRTRNEGAWLREPVFPSSTKK 598
Query: 533 KCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
KC + P P P + T EEDI S+
Sbjct: 599 KCPKLNK--------PQPQPSPLLSTHHTQEEDISSK 627
>AY816329-1|AAW30002.1| 1068|Homo sapiens structure protein NSP5b3b
protein.
Length = 1068
Score = 32.3 bits (70), Expect = 4.0
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = +2
Query: 188 VPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTG 367
+P+ R+ S RE R R+ + TS T TP+ + TKP N+ +
Sbjct: 105 IPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRTPSTKPKQENEGGEKA 164
Query: 368 YDEITIANFLQSLRAQKTE 424
E + L +A+ +E
Sbjct: 165 ALESQVRELLAEAKAKDSE 183
>BC093018-1|AAH93018.1| 631|Homo sapiens coiled-coil domain
containing 93 protein.
Length = 631
Score = 31.5 bits (68), Expect = 7.0
Identities = 35/149 (23%), Positives = 66/149 (44%)
Frame = +2
Query: 284 SKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRIS 463
+KKTLT SE + K + +++ D + LQ+LRA + S
Sbjct: 350 AKKTLTELKTYSEKLDKEQAALEKIESKADP----SILQNLRAL-------VAMNENLKS 398
Query: 464 MDSDTTLNFHEWFRELFRSFERVKCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
+ + + E L + E +K E AP R ++ + P T+ T++ED++
Sbjct: 399 QEQEFKAHCREEMTRLQQEIENLKAERAP--RGDEKTLSSGEPPGTLTSAMTHDEDLDRR 456
Query: 644 HNMNDESDRSDDIVLITNKRDSALNVLDK 730
+NM E ++ I L+ +R+ + +L +
Sbjct: 457 YNM--EKEKLYKIRLLQARRNREIAILHR 483
>BC028609-1|AAH28609.2| 631|Homo sapiens coiled-coil domain
containing 93 protein.
Length = 631
Score = 31.5 bits (68), Expect = 7.0
Identities = 35/149 (23%), Positives = 66/149 (44%)
Frame = +2
Query: 284 SKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRIS 463
+KKTLT SE + K + +++ D + LQ+LRA + S
Sbjct: 350 AKKTLTELKTYSEKLDKEQAALEKIESKADP----SILQNLRAL-------VAMNENLKS 398
Query: 464 MDSDTTLNFHEWFRELFRSFERVKCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
+ + + E L + E +K E AP R ++ + P T+ T++ED++
Sbjct: 399 QEQEFKAHCREEMTRLQQEIENLKAERAP--RGDEKTLSSGEPPGTLTSAMTHDEDLDRR 456
Query: 644 HNMNDESDRSDDIVLITNKRDSALNVLDK 730
+NM E ++ I L+ +R+ + +L +
Sbjct: 457 YNM--EKEKLYKIRLLQARRNREIAILHR 483
>AK025611-1|BAB15188.1| 575|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21958 fis, clone HEP05355. ).
Length = 575
Score = 31.5 bits (68), Expect = 7.0
Identities = 35/149 (23%), Positives = 66/149 (44%)
Frame = +2
Query: 284 SKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRIS 463
+KKTLT SE + K + +++ D + LQ+LRA + S
Sbjct: 294 AKKTLTELKTYSEKLDKEQAALEKIESKADP----SILQNLRAL-------VAMNENLKS 342
Query: 464 MDSDTTLNFHEWFRELFRSFERVKCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
+ + + E L + E +K E AP R ++ + P T+ T++ED++
Sbjct: 343 QEQEFKAHCREEMTRLQQEIENLKAERAP--RGDEKTLSSGEPPGTLTSAMTHDEDLDRR 400
Query: 644 HNMNDESDRSDDIVLITNKRDSALNVLDK 730
+NM E ++ I L+ +R+ + +L +
Sbjct: 401 YNM--EKEKLYKIRLLQARRNREIAILHR 427
>AC009303-1|AAX93279.1| 558|Homo sapiens unknown protein.
Length = 558
Score = 31.5 bits (68), Expect = 7.0
Identities = 35/149 (23%), Positives = 66/149 (44%)
Frame = +2
Query: 284 SKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRIS 463
+KKTLT SE + K + +++ D + LQ+LRA + S
Sbjct: 294 AKKTLTELKTYSEKLDKEQAALEKIESKADP----SILQNLRAL-------VAMNENLKS 342
Query: 464 MDSDTTLNFHEWFRELFRSFERVKCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
+ + + E L + E +K E AP R ++ + P T+ T++ED++
Sbjct: 343 QEQEFKAHCREEMTRLQQEIENLKAERAP--RGDEKTLSSGEPPGTLTSAMTHDEDLDRR 400
Query: 644 HNMNDESDRSDDIVLITNKRDSALNVLDK 730
+NM E ++ I L+ +R+ + +L +
Sbjct: 401 YNM--EKEKLYKIRLLQARRNREIAILHR 427
>AB209993-1|BAE06075.1| 660|Homo sapiens FLJ10996 variant protein
protein.
Length = 660
Score = 31.5 bits (68), Expect = 7.0
Identities = 35/149 (23%), Positives = 66/149 (44%)
Frame = +2
Query: 284 SKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRIS 463
+KKTLT SE + K + +++ D + LQ+LRA + S
Sbjct: 379 AKKTLTELKTYSEKLDKEQAALEKIESKADP----SILQNLRAL-------VAMNENLKS 427
Query: 464 MDSDTTLNFHEWFRELFRSFERVKCETAPEHRYRQEFIPPPIIPPTVEFEQTNEEDIESE 643
+ + + E L + E +K E AP R ++ + P T+ T++ED++
Sbjct: 428 QEQEFKAHCREEMTRLQQEIENLKAERAP--RGDEKTLSSGEPPGTLTSAMTHDEDLDRR 485
Query: 644 HNMNDESDRSDDIVLITNKRDSALNVLDK 730
+NM E ++ I L+ +R+ + +L +
Sbjct: 486 YNM--EKEKLYKIRLLQARRNREIAILHR 512
>AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b3a
protein.
Length = 790
Score = 31.1 bits (67), Expect = 9.3
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +2
Query: 188 VPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTG 367
+P+ R+ S RE R R+ + TS T TP+ + TKP N+ +
Sbjct: 105 IPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRTPSTKPKQENEGGEKA 164
Query: 368 YDEITIANFLQSLRAQKTE 424
E + L +++ +E
Sbjct: 165 ALESQVRELLAEAKSKDSE 183
>AC110299-3|AAY14682.1| 300|Homo sapiens unknown protein.
Length = 300
Score = 31.1 bits (67), Expect = 9.3
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 437 ITTAPKRISMDSDTTLNFHEWFRELFRSFERVKC--ETAPEHRYRQEFIPPPIIPPTVEF 610
I A K I + + T L +W +L + + K +TAP R PP P V
Sbjct: 69 IYAAQKTIVVAASTRLEKEKWMLDLNSAIQAAKSGGDTAPALPGRTVCTRPPRSPNEVSL 128
Query: 611 EQTNEED 631
EQ +E+D
Sbjct: 129 EQESEDD 135
>AB018336-1|BAA34513.2| 1055|Homo sapiens KIAA0793 protein protein.
Length = 1055
Score = 31.1 bits (67), Expect = 9.3
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 437 ITTAPKRISMDSDTTLNFHEWFRELFRSFERVKC--ETAPEHRYRQEFIPPPIIPPTVEF 610
I A K I + + T L +W +L + + K +TAP R PP P V
Sbjct: 824 IYAAQKTIVVAASTRLEKEKWMLDLNSAIQAAKSGGDTAPALPGRTVCTRPPRSPNEVSL 883
Query: 611 EQTNEED 631
EQ +E+D
Sbjct: 884 EQESEDD 890
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,570,059
Number of Sequences: 237096
Number of extensions: 2446351
Number of successful extensions: 7063
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 6559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7027
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18935903120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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