Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L11
         (1340 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    57   1e-09

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 56.8 bits (131), Expect = 1e-09
 Identities = 23/71 (32%), Positives = 42/71 (59%)
 Frame = +2

Query: 185 YLLWFGQEHVDXRDXEINSILSLFKIAIKFIEKXCLEKXYWIVELXSEDCVKKMXXRXVX 364
           Y+LWF QEHVD R  EI S+L ++ I ++       E+ +W+V L +++  +K+  R + 
Sbjct: 8   YVLWFAQEHVDFRQAEIASLLRIWNIQMETPADHNPERPFWVVGLQNDEAARKLASRSMS 67

Query: 365 MKNCIEXWSRA 397
           ++   E W+ +
Sbjct: 68  LRCIFELWAHS 78



 Score = 43.6 bits (98), Expect = 1e-05
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +1

Query: 583 EKXDKIEEFXXLXXXGXVKLKNXDIXLX*VEXXGVNXNNVXEXXYXLXFGKWIXEGXK 756
           EK  KIE    L   G V LK  D+    +E  G++  +V E  Y + FG+W+ +G +
Sbjct: 125 EKVAKIETMQYLPVEGPVNLKTPDVHYWYIEFWGLDPMDVPEQPYDVLFGRWVADGKR 182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,568
Number of Sequences: 2352
Number of extensions: 6850
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 154023705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)