Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L11
         (1340 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC056878-1|AAH56878.1|  463|Homo sapiens tRNA methyltransferase ...    49   3e-05
AL035689-8|CAI42394.1|  458|Homo sapiens chromosome 6 open readi...    49   3e-05
AF532977-1|AAQ10284.1|  463|Homo sapiens putative RNA methylase ...    49   3e-05
AF182423-1|AAG14959.1|  257|Homo sapiens MDS024 protein.               49   3e-05
AL035689-6|CAI42392.1|  134|Homo sapiens chromosome 6 open readi...    36   0.25 

>BC056878-1|AAH56878.1|  463|Homo sapiens tRNA methyltransferase 11
           homolog (S. cerevisiae) protein.
          Length = 463

 Score = 49.2 bits (112), Expect = 3e-05
 Identities = 26/81 (32%), Positives = 40/81 (49%)
 Frame = +2

Query: 185 YLLWFGQEHVDXRDXEINSILSLFKIAIKFIEKXCLEKXYWIVELXSEDCVKKMXXRXVX 364
           YLL   QEH++ R  EI S+L LF       ++   +  +WI+ + SED  + +  R V 
Sbjct: 10  YLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTVC 69

Query: 365 MKNCIEXWSRAKSIXXLXINL 427
            K+  E W   +S   L  +L
Sbjct: 70  AKSIFELWGHGQSPEELYSSL 90



 Score = 36.3 bits (80), Expect = 0.25
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 583 EKXDKIEEFXXLXXXGXVKLKNXDIXLX*VEXXGVNXNNVXEXXYXLXFGKWIXEGXK 756
           EK  +I+    L   G V LK        +E  G++ N + E  + + FG+WI +G +
Sbjct: 123 EKIKRIDALEFLPFEGKVNLKKPQHVFSVLEDYGLDPNCIPENPHNIYFGRWIADGQR 180


>AL035689-8|CAI42394.1|  458|Homo sapiens chromosome 6 open reading
           frame 75 protein.
          Length = 458

 Score = 49.2 bits (112), Expect = 3e-05
 Identities = 26/81 (32%), Positives = 40/81 (49%)
 Frame = +2

Query: 185 YLLWFGQEHVDXRDXEINSILSLFKIAIKFIEKXCLEKXYWIVELXSEDCVKKMXXRXVX 364
           YLL   QEH++ R  EI S+L LF       ++   +  +WI+ + SED  + +  R V 
Sbjct: 10  YLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTVC 69

Query: 365 MKNCIEXWSRAKSIXXLXINL 427
            K+  E W   +S   L  +L
Sbjct: 70  AKSIFELWGHGQSPEELYSSL 90



 Score = 36.3 bits (80), Expect = 0.25
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 583 EKXDKIEEFXXLXXXGXVKLKNXDIXLX*VEXXGVNXNNVXEXXYXLXFGKWIXEGXK 756
           EK  +I+    L   G V LK        +E  G++ N + E  + + FG+WI +G +
Sbjct: 123 EKIKRIDALEFLPFEGKVNLKKPQHVFSVLEDYGLDPNCIPENPHNIYFGRWIADGQR 180


>AF532977-1|AAQ10284.1|  463|Homo sapiens putative RNA methylase
           protein.
          Length = 463

 Score = 49.2 bits (112), Expect = 3e-05
 Identities = 26/81 (32%), Positives = 40/81 (49%)
 Frame = +2

Query: 185 YLLWFGQEHVDXRDXEINSILSLFKIAIKFIEKXCLEKXYWIVELXSEDCVKKMXXRXVX 364
           YLL   QEH++ R  EI S+L LF       ++   +  +WI+ + SED  + +  R V 
Sbjct: 10  YLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTVC 69

Query: 365 MKNCIEXWSRAKSIXXLXINL 427
            K+  E W   +S   L  +L
Sbjct: 70  AKSIFELWGHGQSPEELYSSL 90



 Score = 36.3 bits (80), Expect = 0.25
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 583 EKXDKIEEFXXLXXXGXVKLKNXDIXLX*VEXXGVNXNNVXEXXYXLXFGKWIXEGXK 756
           EK  +I+    L   G V LK        +E  G++ N + E  + + FG+WI +G +
Sbjct: 123 EKIKRIDALEFLPFEGKVNLKKPQHVFSVLEDYGLDPNCIPENPHNIYFGRWIADGQR 180


>AF182423-1|AAG14959.1|  257|Homo sapiens MDS024 protein.
          Length = 257

 Score = 49.2 bits (112), Expect = 3e-05
 Identities = 26/81 (32%), Positives = 40/81 (49%)
 Frame = +2

Query: 185 YLLWFGQEHVDXRDXEINSILSLFKIAIKFIEKXCLEKXYWIVELXSEDCVKKMXXRXVX 364
           YLL   QEH++ R  EI S+L LF       ++   +  +WI+ + SED  + +  R V 
Sbjct: 10  YLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQETYGKSPFWILSIPSEDIARNLMKRTVC 69

Query: 365 MKNCIEXWSRAKSIXXLXINL 427
            K+  E W   +S   L  +L
Sbjct: 70  AKSIFELWGHGQSPEELYSSL 90



 Score = 36.3 bits (80), Expect = 0.25
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 583 EKXDKIEEFXXLXXXGXVKLKNXDIXLX*VEXXGVNXNNVXEXXYXLXFGKWIXEGXK 756
           EK  +I+    L   G V LK        +E  G++ N + E  + + FG+WI +G +
Sbjct: 123 EKIKRIDALEFLPFEGKVNLKKPQHVFSVLEDYGLDPNCIPENPHNIYFGRWIADGQR 180


>AL035689-6|CAI42392.1|  134|Homo sapiens chromosome 6 open reading
           frame 75 protein.
          Length = 134

 Score = 36.3 bits (80), Expect = 0.25
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 583 EKXDKIEEFXXLXXXGXVKLKNXDIXLX*VEXXGVNXNNVXEXXYXLXFGKWIXEGXK 756
           EK  +I+    L   G V LK        +E  G++ N + E  + + FG+WI +G +
Sbjct: 60  EKIKRIDALEFLPFEGKVNLKKPQHVFSVLEDYGLDPNCIPENPHNIYFGRWIADGQR 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,079,803
Number of Sequences: 237096
Number of extensions: 992643
Number of successful extensions: 667
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19347624302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)