Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L11
         (1340 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052078-1|AAK93502.1|  488|Drosophila melanogaster SD03208p pro...    50   5e-06
AE014297-93|AAF52125.2|  488|Drosophila melanogaster CG1074-PA p...    50   5e-06

>AY052078-1|AAK93502.1|  488|Drosophila melanogaster SD03208p
           protein.
          Length = 488

 Score = 50.4 bits (115), Expect = 5e-06
 Identities = 21/77 (27%), Positives = 40/77 (51%)
 Frame = +2

Query: 176 WGGYLLWFGQEHVDXRDXEINSILSLFKIAIKFIEKXCLEKXYWIVELXSEDCVKKMXXR 355
           W  ++LWF QEHVD R  E +S++ +F + ++ + +    K +W+VE    D       R
Sbjct: 4   WRKFILWFAQEHVDFRVQEFDSLVKMFGLQVRRLTEH-TRKPFWLVEFRDTDTALLYASR 62

Query: 356 XVXMKNCIEXWSRAKSI 406
            V ++   E ++ +  +
Sbjct: 63  SVSLRAMFELYAHSNKL 79


>AE014297-93|AAF52125.2|  488|Drosophila melanogaster CG1074-PA
           protein.
          Length = 488

 Score = 50.4 bits (115), Expect = 5e-06
 Identities = 21/77 (27%), Positives = 40/77 (51%)
 Frame = +2

Query: 176 WGGYLLWFGQEHVDXRDXEINSILSLFKIAIKFIEKXCLEKXYWIVELXSEDCVKKMXXR 355
           W  ++LWF QEHVD R  E +S++ +F + ++ + +    K +W+VE    D       R
Sbjct: 4   WRKFILWFAQEHVDFRVQEFDSLVKMFGLQVRRLTEH-TRKPFWLVEFRDTDTALLYASR 62

Query: 356 XVXMKNCIEXWSRAKSI 406
            V ++   E ++ +  +
Sbjct: 63  SVSLRAMFELYAHSNKL 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,429,447
Number of Sequences: 53049
Number of extensions: 288801
Number of successful extensions: 193
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7313944695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)