Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_L06
(1294 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 50 9e-07
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 43 1e-04
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 38 0.002
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 34 0.049
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 33 0.065
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 33 0.086
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 33 0.086
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 32 0.15
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 32 0.15
SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces p... 32 0.15
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 32 0.20
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 31 0.35
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 31 0.46
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 30 0.60
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 29 1.1
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 29 1.1
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 29 1.1
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 29 1.1
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 29 1.4
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 29 1.4
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 29 1.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 1.4
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 1.4
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 1.8
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 29 1.8
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 29 1.8
SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces po... 28 2.4
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 2.4
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.4
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 28 3.2
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 28 3.2
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 28 3.2
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 28 3.2
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 28 3.2
SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces p... 27 4.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.3
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 27 4.3
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 27 4.3
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 4.3
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 5.6
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 27 7.5
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 27 7.5
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 27 7.5
SPBC25H2.14 |mug16||UNC-50 family protein|Schizosaccharomyces po... 27 7.5
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 27 7.5
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 27 7.5
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 27 7.5
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 27 7.5
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 7.5
SPBC776.17 |||rRNA processing protein Rrp7 |Schizosaccharomyces ... 26 9.8
SPAC12G12.02 ||SPAC630.01c|rRNA processing protein, unnamed|Schi... 26 9.8
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 26 9.8
SPAC57A10.09c |||High-mobility group non-histone chromatin prote... 26 9.8
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 26 9.8
SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 9.8
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 49.6 bits (113), Expect = 9e-07
Identities = 29/128 (22%), Positives = 64/128 (50%)
Frame = +2
Query: 335 RDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYRE 514
+ +R + ++K K +K++ L ++ ++ + L + + ++ + E + RE
Sbjct: 583 KQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKRE 642
Query: 515 KDIYREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYREREAYRD 694
+ + ++ + +E R+K + K+ REK++ ++ ++ REK RE+ RE E R
Sbjct: 643 EQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQ-RLREEEEKRI 701
Query: 695 KEPYKERE 718
E K RE
Sbjct: 702 LEERKRRE 709
Score = 44.8 bits (101), Expect = 3e-05
Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Frame = +2
Query: 335 RDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAK----DYYREKQ 502
R+K KR K + K +E++ +R +E++ ++ ++ +EE K + +Q
Sbjct: 592 REKEKKRDKKKQLKLAKEEERQRREAER-LAEQAAQKALEAKRQEEARKKREEQRLKREQ 650
Query: 503 YYREKDIYREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYRERE 682
+++++ R+K + K+ REK+L + +++E RE M RE+ +RE++ R E
Sbjct: 651 EKKQQELERQKREEKQKQKEREKKLKK-----QQQEADRE--KMAREQRLREEEEKRILE 703
Query: 683 AYRDKEPY-KEREHYRDREM 739
+ +E KE E R RE+
Sbjct: 704 ERKRREKLDKEEEERRRREL 723
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/112 (24%), Positives = 59/112 (52%)
Frame = +2
Query: 359 AKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKE 538
AK + + ++E++ L R+++K K++ ++ REE K REK+ +++ ++
Sbjct: 631 AKRQEEARKKREEQRLKREQEK----KQQELERQKREEKQKQKEREKKLKKQQQEADREK 686
Query: 539 MFRDKETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYREREAYRD 694
M R+ + RE+E R E + +E + ++ R +E+ EK+ + R+
Sbjct: 687 MARE-QRLREEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLRE 737
Score = 38.3 bits (85), Expect = 0.002
Identities = 27/131 (20%), Positives = 65/131 (49%)
Frame = +2
Query: 266 DEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRE 445
+ R + L + Q + +++ K+ + + K K+++ L +R K E+ +++
Sbjct: 611 ERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQEL--ERQKREEKQKQ 668
Query: 446 LIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDKETYREKELYRDKEIYREKEIYREP 625
+ ++ ++ REK RE+ + E+E +E R ++L +++E R +E+ E
Sbjct: 669 KEREKKLKKQQQEADREKM-AREQRLREEEEKRILEERKRREKLDKEEEERRRRELL-EK 726
Query: 626 KDMYREKEIRE 658
+ +E+ +RE
Sbjct: 727 ESEEKERRLRE 737
Score = 33.5 bits (73), Expect = 0.065
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Frame = +2
Query: 392 EKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKE----------- 538
E++ L R+K + ++ + EE + RE + REK+ R+K+
Sbjct: 553 EQRVLQAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEER 612
Query: 539 MFRDKETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYREREAYRDKEPYKERE 718
R+ E E+ + E R++E ++ ++ ++E +K ER+ +K+ KERE
Sbjct: 613 QRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKERE 672
Score = 31.9 bits (69), Expect = 0.20
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 3/173 (1%)
Frame = +2
Query: 419 DKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDK--ETYREKELYRDKE 592
D+ E+ E + D ++ D R ++ R I+ + +F + + YREK +
Sbjct: 513 DEDEEEDEEDVD-EDELDLMTDEQRMEEGRRMFQIFAAR-LFEQRVLQAYREKVAQQ--- 567
Query: 593 IYREKEIYREPKDMYREKEIREKDPYREREAYRDKEPYKEREHYRDREMYXXXXXXXXXX 772
R+ ++ E ++ + K+ RE RE+E RDK+ + +R+
Sbjct: 568 --RQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAA 625
Query: 773 XXXXXXXXKDAFXDKEVQRELYTGNRERAYKYTEIER-KRADPERIESRLRQL 928
++ K ++ L RE+ K E+ER KR + ++ + R ++L
Sbjct: 626 QKALEAKRQEEARKKREEQRL---KREQEKKQQELERQKREEKQKQKEREKKL 675
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = -1
Query: 736 FSIPIMFPFFVRFFVSICFPFTIWIFFSNFFLTVHILRLPINFFLSVDFLISIQLFFSIC 557
F ++F FF+ FF+S F F+ F S F+ V+ PI FL F + + +F S
Sbjct: 113 FRCLLLFFFFLLFFLSFSFSFSFLFFLSQIFI-VYFSSFPILHFLFF-FFLCVCVFLSFL 170
Query: 556 FFVSKHFFLSINIFFPVVL 500
F +S L+I +F P++L
Sbjct: 171 FSLSHLLSLAI-LFLPLLL 188
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 631 ILRLPINFFLSVDFLISIQLFFSICFFVSKHFFLSINIFFPVVLF 497
+ R + FF + F +S FS FF+S+ F + + FP++ F
Sbjct: 112 LFRCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFS-SFPILHF 155
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 38.3 bits (85), Expect = 0.002
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 338 DKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDRE---EMAKDYYREKQY- 505
DKR+KRS D+ D H+ K+ K D E +MAKD +E+QY
Sbjct: 822 DKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQEEQYK 881
Query: 506 -YREKDIYREKEMFRDKETYR 565
E+ IY + E+ D E +R
Sbjct: 882 NANEQYIYEDMEVMSDFELHR 902
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.9 bits (74), Expect = 0.049
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 7/142 (4%)
Frame = +2
Query: 332 HRDKRHKRSA-KDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYY 508
H R +SA KDK +KE R S+ +L +DR K E Y
Sbjct: 611 HESHRESKSAEKDKKDKKDKKEDSKRSRSHSVSKPDSSKLRTWTDRTGAFK-VEAEFLGY 669
Query: 509 REKDIYREKEMFRDKETYREKELYRDK---EIYREKEIY---REPKDMYREKEIREKDPY 670
+ I+ K K Y+D E+ K++Y KD ++
Sbjct: 670 SDDKIHLHKTNGVKISVPSAKMSYKDLDYVELMTGKKVYSRTERKKDTQKQSHDHGHSHS 729
Query: 671 REREAYRDKEPYKEREHYRDRE 736
+ + ++KE K+REH + RE
Sbjct: 730 KSHDREKEKEKKKDREHRKHRE 751
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 33.5 bits (73), Expect = 0.065
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Frame = +2
Query: 245 EMDFSLSDEDRDNPDAL-IIKPPQAVIRT-THRDKRHKRSAKDKY----KDTSRKEKKHL 406
E+ + +D + NP+ L +I+ R + KR K+ +KD+Y K+ +RKE++ L
Sbjct: 292 EIPINAADLEGINPELLPVIEEEIRSFRDQSAMKKREKQRSKDEYASLYKEYTRKEQEKL 351
Query: 407 FRDRDKSEK--SKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDKETYREKELY 580
+ D + SK + R M+ + R +D E F D++ Y E++
Sbjct: 352 RKQNDDLQNLLSKHRI----SRIPMS----TVNAFLRAEDSI--PESFSDEQAYYEEKRR 401
Query: 581 RDKEIYREKEIYREPKDMYREKEIREKDPYREREAYRDKE 700
+D ++ E+ RE + M REK + EREA R++E
Sbjct: 402 KD-QLEAEEYYARERRWMNREK---ARTAALEREAAREEE 437
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 33.1 bits (72), Expect = 0.086
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Frame = +2
Query: 308 PQAVIRTTHRDKRHKRSAKDKYK-DTSRKEKKHLFRDR------DKSEKSKRELIKTSDR 466
P I+ + + K KY D+ RK K+ RDR D+S + +SD+
Sbjct: 138 PLLAIKQQEQKQLQTLMEKRKYSLDSDRKSKERRHRDRHHRSNQDRSRERSDNEQHSSDK 197
Query: 467 EEMAKDYYR-EKQYYREKDIYREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYRE 643
E ++ YR ++ +RE+ + ++ RDK + + D ++ ++ +++ +D+ +
Sbjct: 198 REHSRRSYRNDRNNWRER-THNDRYRHRDKYDSGYFKKHYDDDMRFDQGHFQDERDL--K 254
Query: 644 KEIREKDPYREREAYRDKEPYKEREHYRDRE 736
K +R Y R D + H RD +
Sbjct: 255 KYVRTSRQY-SRSPSPDFRTRNHQFHSRDSQ 284
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 341 KRHKRSAKDKYKDTSR--KEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYRE 514
K++ R+++ + S + + H F RD ++R S ++M +D +E R
Sbjct: 254 KKYVRTSRQYSRSPSPDFRTRNHQFHSRDSQPITQRHTDIESRLQKM-QDNAKELDESRR 312
Query: 515 KDIYREKEMFRDKETYREKE 574
K I ++ RD+E + EKE
Sbjct: 313 KKIELLEKKERDEEQFLEKE 332
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 33.1 bits (72), Expect = 0.086
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
Frame = +2
Query: 197 DDQSEDGELARSPIHDEMDFSLSDEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKYK 376
D SE G+ A + + DF D D + P A+ + P+ + D+Y
Sbjct: 347 DMDSEVGKEASRGVRLD-DFYYFD-DEEEPVAVAKRVPKGTSTYQATWIPDEDEESDQYS 404
Query: 377 DTSRKEKKHLFRDRDKSEKSKR--ELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRD 550
D E + D+D E S E SD EE D E D+ E+E+ R
Sbjct: 405 DVEDTEV--IIEDQDNQEISNHVAEEKIDSDEEETIDDAKSEMFV----DLSEEEEV-RQ 457
Query: 551 KETYREKELYRDKEIYREKEIYREPKDMYREK 646
E YR+K+ +E+ E+ +P ++ RE+
Sbjct: 458 YEEYRKKQKELQEELEFPDEVELQPNELARER 489
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 32.3 bits (70), Expect = 0.15
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = -1
Query: 736 FSIPIMFPFFVRFFVSICFPFT----IWIFFSNFFLTVHILRLPINF--FLSVDFLISIQ 575
FS+ +VRFF PF+ W+FF+ FFL+ I + F FLS+ + ++
Sbjct: 204 FSMVCAIYCYVRFFKLRHTPFSRPWWAWLFFTGFFLSCTISTKYVGFFTFLSIGLSVCLE 263
Query: 574 LFF 566
L++
Sbjct: 264 LWY 266
Score = 30.3 bits (65), Expect = 0.60
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = -1
Query: 712 FFVRFFVSICFPFTIWIFFSNFFLTVHILRL--PINFFLSVDF 590
F RFF I FPF ++F+ F++ +IL + P + F+S++F
Sbjct: 283 FLARFFCLIFFPFLFFLFW--FYMHFNILTISGPGDSFMSLEF 323
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 32.3 bits (70), Expect = 0.15
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Frame = +2
Query: 311 QAVIRTTHRDKRHKRSAKDKYKDTSRKEKK------HLFRDRDKSEKSKRELIKTSDREE 472
+ V +T +R R +++K+ R+ KK + +K EKS E K +E
Sbjct: 1108 EIVFKTLVEKEREWRENSEEWKEKMREYKKWQSTANQRAKQMEKFEKSATEKQKEQALKE 1167
Query: 473 MAKDYYREKQYYREKDIYREKEMFRDKETYREKELYRDKEIYREKEIYRE 622
+ E ++ ++ E K TY ++ELYRD E R ++ E
Sbjct: 1168 AGDISWIE--FFDPEEPSPEFSFAGAKSTYGKEELYRDLEALRRRQAVPE 1215
>SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 301
Score = 32.3 bits (70), Expect = 0.15
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Frame = +2
Query: 185 SNYEDDQSEDGE------LARSPIHDEMDFSLSDEDRD-NPDALIIKPPQAV---IRTTH 334
S Y D + +G+ L R HD D + R +P + + P+ IR+
Sbjct: 172 STYYDSRERNGKRTSRSTLDRKRFHDASDTERNRYGRSPSPHSRFSEKPRGERYDIRSYS 231
Query: 335 RDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYRE 514
R HK +D+Y+ T R+E+ + RD + ++ R R ++ YREK Y
Sbjct: 232 RS--HKERYEDRYRPTRRRERHYRTRDDEGFDEFGR---SRDGRWRESRTSYREKHRYDR 286
Query: 515 KDIYREKE 538
+ E +
Sbjct: 287 DALSSESD 294
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 31.9 bits (69), Expect = 0.20
Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 4/189 (2%)
Frame = +2
Query: 395 KKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDKETYREKE 574
KK +++ E+S E + ++ + ++ +K I E++ +D+E R+KE
Sbjct: 81 KKRNVEEQNLIEQSITESQRIFSEKQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKE 140
Query: 575 LY----RDKEIYREKEIYREPKDMYREKEIREKDPYREREAYRDKEPYKEREHYRDREMY 742
L ++KE R E + ++ R + + D R+ E R+K + +E ++D +
Sbjct: 141 LMEKEKKEKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREK---RMKETFKD-DPE 196
Query: 743 XXXXXXXXXXXXXXXXXXKDAFXDKEVQRELYTGNRERAYKYTEIERKRADPERIESRLR 922
KE++ +T R+ + +I + + +I L+
Sbjct: 197 EDSNMAWSIIHKIKTEVVAPISEKKELKNYCFTQKRKITPRLGQITKSNSQIMKITQLLQ 256
Query: 923 QLADESHST 949
Q E+ +T
Sbjct: 257 QTFQEARNT 265
Score = 27.9 bits (59), Expect = 3.2
Identities = 26/95 (27%), Positives = 47/95 (49%)
Frame = +2
Query: 266 DEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRE 445
+++R N + L K +A R +D+ +R + K+ KE+ L ++ E +R
Sbjct: 109 EQERFNRELLEKKRIEAE-RQRLKDEEERRKKELMEKEKKEKERIRLIEEQKHKENEQRR 167
Query: 446 LIKTSDREEMAKDYYREKQYYREKDIYREKEMFRD 550
L +E++ D R+++ REK R KE F+D
Sbjct: 168 L----KQEQI--DAKRKEEEAREK---RMKETFKD 193
Score = 26.6 bits (56), Expect = 7.5
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = +2
Query: 371 YKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYR--EKEMF 544
+ + R E++ R+ + ++ + E + D EE K EK+ +EK+ R E++
Sbjct: 102 FSEKQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEK-KEKERIRLIEEQKH 160
Query: 545 RDKETYREKE----LYRDKEIYREKEIYREPKD 631
++ E R K+ R +E REK + KD
Sbjct: 161 KENEQRRLKQEQIDAKRKEEEAREKRMKETFKD 193
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 31.1 bits (67), Expect = 0.35
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +2
Query: 332 HRDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQ 502
+++K+ +S +D + DTS EK+ L D+++K +R+ I+ D E +A R K+
Sbjct: 55 NKEKKEGQS-EDMFSDTSEDEKRTL--PNDEAQK-RRDFIENGDAERLAHKGLRNKE 107
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 30.7 bits (66), Expect = 0.46
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Frame = +2
Query: 230 SPIHDEMDFSLSDEDRDNPDALIIKPPQAVIRTTHRDKRHKR------SAKDKYK-DTSR 388
S + M + DEDR DA + R H K+ + SA D K +
Sbjct: 137 SEFSEWMQKAEEDEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKLEKIT 196
Query: 389 KEKKHLFRDRDKSEKSKRELIKTSDREEMAK 481
K+KK + +DK SK+ +SD+EE K
Sbjct: 197 KKKKKEHKKKDKESSSKKRKSGSSDKEEKKK 227
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 30.3 bits (65), Expect = 0.60
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 335 RDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEM 475
+DK K+S + K D+ +++K RD++ + SK L K S +++
Sbjct: 154 KDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSGLKKVSGTKKV 200
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 341 KRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQ 502
K K S K+ K K+KK +DK +K + L + K R+K+
Sbjct: 129 KVRKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKE 182
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +2
Query: 536 EMFRDKETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYREREA---YRDKEPY 706
++ +D++ Y+ D YR Y PK++ E DP +ER++ +D+E
Sbjct: 71 DISQDEDDYKRTNDVNDS--YRLVRQYEAPKELLNEYADESYDPMQERQSKKQIQDRESD 128
Query: 707 KEREHYRDREM 739
+++ Y DR++
Sbjct: 129 YQKQRY-DRQL 138
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 617 REPKDMYREKEIREKDPYREREAYRDKEPYKE 712
++ +D+Y EKE+ K P RE +++ D + + E
Sbjct: 425 KDAEDIYEEKELESKVPIREPKSFADFKNHPE 456
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 29.5 bits (63), Expect = 1.1
Identities = 25/95 (26%), Positives = 44/95 (46%)
Frame = +2
Query: 251 DFSLSDEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSE 430
D+S S D +P+A + KP V + +D S+K K ++D+ E
Sbjct: 386 DWSKSYIDYSDPNAEVAKPAPVVAPAAPTVEAEVNGVED-----SKKRKSVESSEKDEDE 440
Query: 431 KSKRELIKTSDREEMAKDYYREKQYYREKDIYREK 535
+K+E R++ AK +EK+ +EK ++K
Sbjct: 441 AAKKE---EKRRKKEAKKEKKEKKEKKEKKEKKKK 472
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 29.5 bits (63), Expect = 1.1
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +2
Query: 491 REKQYYREKDIYREKEMFRDKETYR--EKELYRDKEIYREKEIYREPKDMYREKEIREKD 664
R + R++D + +RD+ + R E RD R ++ Y + +RE +RE+
Sbjct: 23 RSRGDQRDRDYREYRRNYRDERSSRRYEDSQRRDYSPARRRDRY----ERHRES-VREES 77
Query: 665 PYREREAYRDKEPYKE--REHYRDRE 736
P R E R+ +P + RE +R+R+
Sbjct: 78 PRRPVEHERNWQPELKHGRERFRERD 103
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 545 RDKETYREKELYRDKEIYREKEIYREPKD--MYREKEIREKDPYREREAY-RDKEPYKER 715
R+ E+ R + RD++ + YR+ + Y + + R+ P R R+ Y R +E +E
Sbjct: 17 RNYESSRSRGDQRDRDYREYRRNYRDERSSRRYEDSQRRDYSPARRRDRYERHRESVREE 76
Query: 716 EHYRDRE 736
R E
Sbjct: 77 SPRRPVE 83
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 29.1 bits (62), Expect = 1.4
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Frame = +2
Query: 194 EDDQSEDGELARSPIHDEMDFSLSDEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKY 373
E ED A + ++ E+ + R++PDA P+ R R +R +D Y
Sbjct: 140 EFSTEEDMRNALTSLNGEVIKGQAVTLREDPDAANEPLPEVPSRFRSRSPPARRRYRDDY 199
Query: 374 K--DTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFR 547
+ R++ RD D+ + R + ++R+E + R++ + YR
Sbjct: 200 RRGGDYRRDAYRPGRD-DERRYAPRGEYRRNNRDEYRRG-GRDEYRRNSRSDYRRP---H 254
Query: 548 DKETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYREREAY-RDKEPYKEREHY 724
D E YR R E ++ YR +D R D YR R+AY R P ++RE
Sbjct: 255 DDE-YRRP---RGDEYRPGRDEYRRSRDDGRPS---HDDEYR-RDAYSRSPSPRRDREEN 306
Query: 725 R 727
R
Sbjct: 307 R 307
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 221 LARSPIHDEMDFS--LSDEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKYKDTSRKE 394
+A S + D +DF L D D D+P +I K + V + + + KRS++ + S KE
Sbjct: 460 VALSILRDRIDFDEFLIDYDADSPTKVIGK--RNVSKASRTGQGRKRSSRSSWNKPSAKE 517
Query: 395 KK 400
++
Sbjct: 518 QR 519
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 344 RHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDI 523
R + S ++ Y D SR L R R +S + LI++ D+ ++ + YR +
Sbjct: 686 RERSSNRNSYSDLSRSSS--LSRGRSRSYTPEGRLIESEDKGYRSRSSSPASRKYRSRQR 743
Query: 524 YR 529
YR
Sbjct: 744 YR 745
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 1.4
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Frame = +2
Query: 260 LSDEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKYKDTSRKEKKHLFR-DRDKSEKS 436
+ EDRD LI + I +R+KR D +DT+ K+K L D + S
Sbjct: 1249 IMSEDRDK---LIRGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDAS 1305
Query: 437 KRE-LIKTSDREEM----AKDYYREKQYYREKDIY 526
K E KT D EM + + Y EKD Y
Sbjct: 1306 KIEGDAKTGDDNEMEDLDKMEDLEKPDYAEEKDPY 1340
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 637 VHILRLP-INFFLSVDFLISIQLFFSICFFVSKHFFLSINIFFPVVLFFSIVIF 479
VH +P INFFL +I F I +S HF + FP++ F F
Sbjct: 147 VHFHLIPFINFFLLYHQIILSHSLFHISHLISFHFLFFSFLSFPLLSFILFPCF 200
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Frame = +2
Query: 410 RDRDKSEKSKRELIKTSDREEMAKDYYREKQY----YREKDIYREKEMFRDK-ETYREKE 574
RDRD+S +S R +S DY R Y R + Y E+ + Y ++
Sbjct: 149 RDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEERSSRSSRAHDYDYED 208
Query: 575 LYRDKEIYREKEIYREPKDMYREKEIREKD 664
L D + K P++ + E+D
Sbjct: 209 LRDDDRSHERKRSRSRPRERSSKLSEEERD 238
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 667 WIFFSNFFLTVHILR--LPINFFLSVDFLISIQLFFSICFF 551
WI + L + + R + I+FF+ + L+ ++F SIC F
Sbjct: 81 WITLTEIMLAITVFREAISISFFMLLSTLMFARVFHSICSF 121
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 554 ETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYREREAYRDKEPYKEREHYRDR 733
E +R++ RD + RE + + D Y + ++D +R YR+ + ++H DR
Sbjct: 286 ELFRKRS--RDNNLSRESSVSSKHLD-YNSRNYNKRDRDPDRTKYREYHSERRKQHRTDR 342
>SPBC83.11 |||triose phosphate transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = -1
Query: 763 SKVGVFSIHFSIPIMFPFFVRFFVSICFP--FTIWIFFSNFFLTVHILRLPINFFLSVDF 590
+K+ V ++H ++ + P F F ++ +FS LT + L +F LS D
Sbjct: 92 TKIPVSTVH-TVKALSPLFTVLAYRFMFRHVYSAMTYFSLVPLTFGVT-LACSFELSADI 149
Query: 589 LISIQLFFSICFFVSKHFF 533
+ + S C FVS++ F
Sbjct: 150 VGLLYALISTCIFVSQNIF 168
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 470 EMAKDYYREKQYYRE-KDIYREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYREK 646
+ ++ R +QYY +D R D+E +R + D+ YR+ +R + +R+
Sbjct: 318 DFSQSVARYRQYYNSNRDRKRSSSRSDDREYHRRSDGRYDRSNYRDDYRHRRKERDHRDD 377
Query: 647 EIREKDPYREREAYRDKEPYKEREH 721
+ ++ R Y D Y +R +
Sbjct: 378 QSSFRNE-RFSNYYGDDRSYHKRRN 401
Score = 26.2 bits (55), Expect = 9.8
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Frame = +2
Query: 494 EKQYYREKDIYREKEMFRDKETYREKEL-YR-DKEIYREKEI---YREPKDMYREKEIRE 658
+++Y+R D ++ +RD +R KE +R D+ +R + Y + + ++ +
Sbjct: 345 DREYHRRSDGRYDRSNYRDDYRHRRKERDHRDDQSSFRNERFSNYYGDDRSYHKRRNTGN 404
Query: 659 KDPYREREAYRDKEP---YKEREHYRD 730
K+ + RDK P Y+ YRD
Sbjct: 405 KNC---DDHLRDKSPERRYRYDRRYRD 428
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 28.3 bits (60), Expect = 2.4
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Frame = +2
Query: 347 HKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREK-DI 523
H + D K+ K L + ++ E K+E+ K + + + KDY + ++ E+
Sbjct: 22 HAPKEDESVDDNFPKQFKRLLQQKEYHESKKKEIKKGNLKNKKKKDYGKIQRLPGERLSE 81
Query: 524 YREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYREKEIREKDPYREREAYRDK 697
+ ++ +++ D+ + +K +E K + + KE RE+D E + DK
Sbjct: 82 FSQRVNKAIPVSFKSGPSKIDE--FTDK---KEKKKIAKRKEKRERDWNEIEENFEDK 134
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 482 LWPFLLDQKFL*VLF*IFQTYHGP 411
LWP L Q+F+ V+F I TY+ P
Sbjct: 436 LWPLLHPQRFVDVVFAIDSTYNDP 459
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 27.9 bits (59), Expect = 3.2
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +2
Query: 425 SEKSKRELIKTSDRE-EMAKDYYREKQYYREKDIYREKEMFRDKETYREKEL----YRDK 589
SE ++ + D E E K Y +EKQ E+ +++++ ++ Y EK+L +K
Sbjct: 19 SELPVKKAFRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEEERLKYEEKKLRISRLANK 78
Query: 590 EIYREKEIYRE 622
E R +E+ E
Sbjct: 79 ESSRNEELLTE 89
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 482 LWPFLLDQKFL*VLF*IFQTYHGP 411
LWP L Q+F+ V+F I TY+ P
Sbjct: 436 LWPLLHPQRFVDVVFAIDSTYNDP 459
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.9 bits (59), Expect = 3.2
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 470 EMAKDYYREKQYYREKDIYREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYREKE 649
E K+ +KQ +E+ I R+KE R K ++ ++K++ +++I K M +E E
Sbjct: 73 EAGKEKKLQKQRAQEERI-RQKEAERLKREKERQQREQEKKLREQEKI--AAKKM-KELE 128
Query: 650 IREKDPYREREAYRDKE 700
EK+ R +E R KE
Sbjct: 129 KLEKERIRLQEQQRRKE 145
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.9 bits (59), Expect = 3.2
Identities = 30/132 (22%), Positives = 57/132 (43%)
Frame = +2
Query: 194 EDDQSEDGELARSPIHDEMDFSLSDEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKY 373
ED+ E+ E A + +E D +ED ++ D R KR + ++++
Sbjct: 97 EDNVEENEEEADANEEEEEDEEDDEEDEEDEDE----------SGGGRRKRARHDRRNQF 146
Query: 374 KDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDK 553
D + + D+ ++ RE EE+ DY + + +RE D R+++ +
Sbjct: 147 LDIEAEVDEDEEELEDEEDEIGRE--DGFIEEEVGADYVGDDRRHRELD--RQRQELQSV 202
Query: 554 ETYREKELYRDK 589
+ R E YR+K
Sbjct: 203 DAERLAEEYREK 214
>SPAC10F6.14c |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 535
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 552 KKHIEKKSCIEIRKSTERKKFIGSLRICT 638
+K I KK + ++ ERKKFIG L+ CT
Sbjct: 428 EKIISKKEAFQ-QQLAERKKFIGFLQDCT 455
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 506 YREKDIYREKEMFRDKETYREKELYRDKEIYR---EKEIYREPKDMYREKEIREKDPYRE 676
+ E + + E R E + +DKE ++ +KE ++ PKD K ++K+ ++
Sbjct: 344 HHELEEHEGPEHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKG 403
Query: 677 REAYRDKEPYKEREHYR 727
+ + K++EH++
Sbjct: 404 PKDKEHHKGPKDKEHHQ 420
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 335 RDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYR-EKQYYR 511
+DK H + KDK K+K+H +DK E K K + K++++ K+ +
Sbjct: 369 KDKEHHKGPKDKEHHKGPKDKEHHKGPKDK-EHHKGPKDKEHHKGPKDKEHHQGPKEKHN 427
Query: 512 EK 517
E+
Sbjct: 428 ER 429
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 335 RDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTS 460
+DK H + KDK K+K+H ++K + + +++S
Sbjct: 396 KDKEHHKGPKDKEHHKGPKDKEHHQGPKEKHNERPEQNMQSS 437
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 635 YREKEIREKDPYREREAYRDKEPYKERE--HYRDREMY 742
YR R++D R R +YR P +E +YR +E Y
Sbjct: 211 YRRNNYRDRDSNRYRNSYRPSRPQREHSPGNYR-KERY 247
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +2
Query: 386 RKEKKHLFRDRDKSEKS------KRELIKTSDREEMAKDYYREKQYYREKDI 523
+K +K +F +D S + +RE+ + + R E K + +E++ REK+I
Sbjct: 88 KKVEKKMFMGKDPSADTSFLPDAEREIRENAKRAEYRKQWLKEQEQIREKEI 139
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/69 (20%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 443 ELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDKETYREKELYRDKEIYRE-KEIYR 619
+++K D+ + +D+ ++ Y R + +++ + +DK EK+LY + + + + Y
Sbjct: 137 KIVKDVDKLLLKRDH-KQLDYDRHRSSFKKLQEKKDKSLKDEKKLYEAETAFEQSSQEYE 195
Query: 620 EPKDMYREK 646
+M +E+
Sbjct: 196 YYNEMLKEE 204
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +2
Query: 557 TYREKEL--YRDK-EIY--REKEIYREPKDMYREKEIREKDPYRER 679
TY K L Y DK E+Y + K ++ E Y+E+ I DP E+
Sbjct: 268 TYLRKSLNSYVDKLEVYCQKRKSLFEELNKQYQEQSIIRADPNNEK 313
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/84 (19%), Positives = 35/84 (41%)
Frame = +2
Query: 335 RDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYRE 514
+ K K+++K+K +S++++ ++ K + L ++R+E + + + E
Sbjct: 98 KPKAKKKNSKEKISKSSKQDEHKTDVHKESVSKLSKNLESRNNRDENSAKREKNNSHQVE 157
Query: 515 KDIYREKEMFRDKETYREKELYRD 586
D EM LY D
Sbjct: 158 ADTNNATEMVSSNAKKSVYPLYYD 181
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 776 SWWFL*SWGFLYTFLYPYNVPFLCKVLCL 690
SW F W +L +FL Y + + +CL
Sbjct: 159 SWGFTLGWNYLASFLATYPLELITASICL 187
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/88 (15%), Positives = 35/88 (39%)
Frame = +2
Query: 467 EEMAKDYYREKQYYREKDIYREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYREK 646
E + D + + D + ++ R +R + Y + YR ++ Y +
Sbjct: 294 ESINLDNFNRPSQQEDYDKPKNTQVSRSSNHHRRYDSYHPDS---RSDSYRSKREHYDNR 350
Query: 647 EIREKDPYREREAYRDKEPYKEREHYRD 730
+ + + E+ +Y + +++R H D
Sbjct: 351 DTGPRSKHLEKSSYVYNQNFEDRTHLSD 378
>SPBC25H2.14 |mug16||UNC-50 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 235
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -1
Query: 718 FPFFVRFFVSICFPFTIWIFFSNFFLTVHILRLPINFFLSVDFLISIQLFFSICFFVSKH 539
F F V F I +W F + T I F L VDF + ++ +F++K
Sbjct: 55 FSFIVLFSCMIVISALLWALF--YMNTPKGYVTTITFMLFVDFGAVGVIMATMYYFIAKR 112
Query: 538 FFLSIN 521
F + N
Sbjct: 113 FLMKSN 118
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 407 FRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDKETYREKEL 577
F D D + + E S RE M++ + K Y E+ EKE + D+ ++++
Sbjct: 187 FEDSDAENEKEGEGAHKSKREVMSEIIAKSKHYKAERQ--AEKERYEDEREKLDEQM 241
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 26.6 bits (56), Expect = 7.5
Identities = 20/125 (16%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Frame = +2
Query: 266 DEDRDNPDALIIKPPQAVIRTTHRDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRE 445
D+ + + + + P+ + + + + K+K + + +EKK ++ KS +
Sbjct: 28 DQFEETEEEIKKRSPEELKQAIEALREKAKEKKEKERILALEEKKTNYKILQKSNDETAQ 87
Query: 446 LIKTSDREEMAKDYYREKQYYREKDIYREK---EMFRDKETYREKELYRDKEIYREKEIY 616
++ + +D + +Q E R+K E+ RDK+ + ++ +
Sbjct: 88 AMRKMQDQARLRDLQKIRQQKAEDAEQRKKILAEIERDKKRRAAERENKNSSVKETAAPI 147
Query: 617 REPKD 631
++PK+
Sbjct: 148 KQPKN 152
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 479 KDYYREKQYYREKDIYREKEMFRDKETYREKELYRDKEI 595
KD+ E +KD Y+E E R++ E ++KEI
Sbjct: 72 KDWKNETLIPFQKDFYKEHENVRNRSDAEVTEYRKEKEI 110
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 26.6 bits (56), Expect = 7.5
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 497 KQYYREKDIYREKEMFRDKETYREKELYRDKEIYREKEIYREPKDMYRE-KEIREKDPYR 673
K REK +E R ++ RE+EL + E + ++ E K + ++ E+ P
Sbjct: 30 KAQIREKAREITEERNRQRKLQRERELRQKYEEEQRRQQAMEAKRIAASTRQTSERPPLS 89
Query: 674 EREAYRDKEPYKEREHYRDRE 736
EA R +E KE++ ++
Sbjct: 90 AEEAKRIRE-VKEKDRLESKK 109
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 26.6 bits (56), Expect = 7.5
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +2
Query: 323 RTTHRDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYRE 496
RT +K + AK ++T K++ +RD +K++RE + + +EE ++ R+
Sbjct: 670 RTIKNNKDMQTKAKRAMRETMVFWKRNERVERDLRKKAEREALDRAKKEEELRESRRQ 727
>SPBC776.17 |||rRNA processing protein Rrp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 254
Score = 26.2 bits (55), Expect = 9.8
Identities = 21/93 (22%), Positives = 44/93 (47%)
Frame = +2
Query: 392 EKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDKETYREK 571
EK+ LF +++ ++ + S R + + E+Q ++KD K+ +R + REK
Sbjct: 166 EKRRLFAMKNQPDEDGFVTVVRSGRAPVGRPQDAERQLEKKKDTGIHKDFYRFQ--LREK 223
Query: 572 ELYRDKEIYREKEIYREPKDMYREKEIREKDPY 670
+ ++ + E ++ +EK R+ PY
Sbjct: 224 KKKALLDLAHKFEFDKQRIQQLKEK--RQFKPY 254
>SPAC12G12.02 ||SPAC630.01c|rRNA processing protein,
unnamed|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 513 KKI-FIERKKCLETKKHIEKKSCIEIRKSTERKKFIGSLRICTV 641
KK+ F ERKK K +EK E +RK+ S+R C +
Sbjct: 64 KKVRFFERKKAERRIKQLEKSLKDETMDDEKRKQCEKSMRKCQI 107
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 26.2 bits (55), Expect = 9.8
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 431 KSKRELIKTSDREEMAKDYYREKQYYREKDIYREKEMFRDKETYREKELYRDKEIYREK- 607
K +RE+++ ++ + + +++Q EK++ KE + K L + IYREK
Sbjct: 180 KREREILQNKNQGQSTLNSLKDRQQALEKEVNIFKEREKIKSYIEMLGLAKMLVIYREKT 239
Query: 608 EIYREPKDMYREKEIREKDPYREREAYRDK 697
++ + + ++ + KD E + DK
Sbjct: 240 NVFNQLRADKKKLKKDLKDLVEEFQPILDK 269
>SPAC57A10.09c |||High-mobility group non-histone chromatin
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 108
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 635 YREKEIREKDPYREREAYRDKEPY-KEREHY 724
++E E++PY E+ A +DKE Y +ER+ Y
Sbjct: 54 WKELTSTEREPYEEK-ARQDKERYERERKEY 83
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 26.2 bits (55), Expect = 9.8
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 311 QAVIRTTHRDKRHKRSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIK-TSDREEMAKD- 484
QA+ + +HK + + + +++ D + + L+K T R E +D
Sbjct: 289 QALFFKLKLNGKHKGTKTHVFDGKTLFPTNRVYQVCDIVDPTIAPLLKDTQLRSECHRDT 348
Query: 485 -YYREKQYYREKDIYREK 535
+YR +YY+ +D+ REK
Sbjct: 349 GWYRSGRYYKVRDLMREK 366
>SPAC13G7.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 26.2 bits (55), Expect = 9.8
Identities = 24/114 (21%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +2
Query: 182 MSNYEDDQSEDGELARSPIHD--EMDFSLSDEDRDNPDALIIKPPQAVIRTTHRD-KRHK 352
M + D + D +A+ IH+ + + S D + ++P + + R+ + H
Sbjct: 1 MESSLDRLNFDEFVAKLLIHESKKKNKSFVDHGYIEKEKTKLRPNKVFLNNMVRNVQSHN 60
Query: 353 RSAKDKYKDTSRKEKKHLFRDRDKSEKSKRELIKTSDREEMAKDYYREKQYYRE 514
R ++ +D RK+ + +D D + S+R S R ++ + ++K+ Y+E
Sbjct: 61 RGINNRRRDQKRKQLISIKQDNDLNVSSER----LSRRIDVPRPTSKKKRLYKE 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,504,921
Number of Sequences: 5004
Number of extensions: 69604
Number of successful extensions: 448
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 705448190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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