Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_L04
(1291 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 25 1.6
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 25 1.6
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 25 1.6
DQ855504-1|ABH88191.1| 124|Tribolium castaneum chemosensory pro... 24 2.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 4.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 4.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 4.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 4.9
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 23 6.5
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 23 6.5
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 22 8.6
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 24.6 bits (51), Expect = 1.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 365 PLSTALTNNLATWLAFNSTRL 303
PLST++ ++L W + NST +
Sbjct: 202 PLSTSMRSHLCNWGSANSTNI 222
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 24.6 bits (51), Expect = 1.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 365 PLSTALTNNLATWLAFNSTRL 303
PLST++ ++L W + NST +
Sbjct: 362 PLSTSMRSHLCNWGSANSTNI 382
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 24.6 bits (51), Expect = 1.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 365 PLSTALTNNLATWLAFNSTRL 303
PLST++ ++L W + NST +
Sbjct: 362 PLSTSMRSHLCNWGSANSTNI 382
>DQ855504-1|ABH88191.1| 124|Tribolium castaneum chemosensory
protein 18 protein.
Length = 124
Score = 24.2 bits (50), Expect = 2.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 536 VWSRLMMNRNPTGEYRAVY 592
+W +L +P+GEYR+ Y
Sbjct: 95 MWKQLEAKYDPSGEYRSKY 113
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 4.9
Identities = 19/92 (20%), Positives = 42/92 (45%)
Frame = -2
Query: 945 RQGEYVLRVLRELVFVILIDFG*LLFSVLXIRFCATALPVVRFSNVVGGFRTYDFLRICI 766
++ + L+V+ +L + G +++ ++ R +P+ F +G + Y I
Sbjct: 219 KESQRFLKVIIDLFAIAAQATGFVVWPIIEQRADLWIIPIAIFLVSLGWWENYISRHSPI 278
Query: 765 CFSKLTQVIKEIIVVARFVYSNFM*LFLSLVF 670
F K IKE + +R+ F+ ++ L+F
Sbjct: 279 PFIKKLGKIKENLEQSRYFIYMFVSVWKCLLF 310
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 4.9
Identities = 19/92 (20%), Positives = 42/92 (45%)
Frame = -2
Query: 945 RQGEYVLRVLRELVFVILIDFG*LLFSVLXIRFCATALPVVRFSNVVGGFRTYDFLRICI 766
++ + L+V+ +L + G +++ ++ R +P+ F +G + Y I
Sbjct: 219 KESQRFLKVIIDLFAIAAQATGFVVWPIIEQRADLWIIPIAIFLVSLGWWENYISRHSPI 278
Query: 765 CFSKLTQVIKEIIVVARFVYSNFM*LFLSLVF 670
F K IKE + +R+ F+ ++ L+F
Sbjct: 279 PFIKKLGKIKENLEQSRYFIYMFVSVWKCLLF 310
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 4.9
Identities = 19/92 (20%), Positives = 42/92 (45%)
Frame = -2
Query: 945 RQGEYVLRVLRELVFVILIDFG*LLFSVLXIRFCATALPVVRFSNVVGGFRTYDFLRICI 766
++ + L+V+ +L + G +++ ++ R +P+ F +G + Y I
Sbjct: 219 KESQRFLKVIIDLFAIAAQATGFVVWPIIEQRADLWIIPIAIFLVSLGWWENYISRHSPI 278
Query: 765 CFSKLTQVIKEIIVVARFVYSNFM*LFLSLVF 670
F K IKE + +R+ F+ ++ L+F
Sbjct: 279 PFIKKLGKIKENLEQSRYFIYMFVSVWKCLLF 310
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 4.9
Identities = 19/92 (20%), Positives = 42/92 (45%)
Frame = -2
Query: 945 RQGEYVLRVLRELVFVILIDFG*LLFSVLXIRFCATALPVVRFSNVVGGFRTYDFLRICI 766
++ + L+V+ +L + G +++ ++ R +P+ F +G + Y I
Sbjct: 219 KESQRFLKVIIDLFAIAAQATGFVVWPIIEQRADLWIIPIAIFLVSLGWWENYISRHSPI 278
Query: 765 CFSKLTQVIKEIIVVARFVYSNFM*LFLSLVF 670
F K IKE + +R+ F+ ++ L+F
Sbjct: 279 PFIKKLGKIKENLEQSRYFIYMFVSVWKCLLF 310
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 22.6 bits (46), Expect = 6.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 515 NKYCWGSVWSRLMMNRNPTGEYRAVY 592
NK W W L +P GEY++ Y
Sbjct: 92 NKPSW---WQELQEKYDPKGEYKSRY 114
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 22.6 bits (46), Expect = 6.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 836 AVAQNRIXRTENR-S*PKSMRITNTSSRRTLRTYSPWRRELCN 961
A N R + S +S+R+T T+S Y P R+LC+
Sbjct: 140 ATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYLPMDRQLCH 182
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 22.2 bits (45), Expect = 8.6
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 442 PNSEGTPLVPITDEST 489
PN++GT + +TDE++
Sbjct: 193 PNNDGTKCLVVTDEAS 208
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.317 0.133 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,976
Number of Sequences: 336
Number of extensions: 4040
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38021570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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