Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L02
         (1227 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.66 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.66 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   1.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   1.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   1.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    24   2.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.66
 Identities = 8/32 (25%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = -2

Query: 182  WNKMLDKYLFKLENNYRAMTV-TENIRYKLIF 90
            WN+++++YL  +E++ + ++   +++R K++F
Sbjct: 1196 WNELIEQYLHPIEDDKKKVSAELKDLRDKMVF 1227


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.66
 Identities = 8/32 (25%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = -2

Query: 182  WNKMLDKYLFKLENNYRAMTV-TENIRYKLIF 90
            WN+++++YL  +E++ + ++   +++R K++F
Sbjct: 1196 WNELIEQYLHPIEDDKKKVSAELKDLRDKMVF 1227


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 209  FTTHTFFR*WNKMLDKYLFKLENN 138
            F + T    W  +LDKYL+ ++ N
Sbjct: 1227 FLSSTEILFWKDLLDKYLYPIDEN 1250


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 209  FTTHTFFR*WNKMLDKYLFKLENN 138
            F + T    W  +LDKYL+ ++ N
Sbjct: 1227 FLSSTEILFWKDLLDKYLYPIDEN 1250


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 209  FTTHTFFR*WNKMLDKYLFKLENN 138
            F + T    W  +LDKYL+ ++ N
Sbjct: 1227 FLSSTEILFWKDLLDKYLYPIDEN 1250


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 209  FTTHTFFR*WNKMLDKYLFKLENN 138
            F + T    W  +LDKYL+ ++ N
Sbjct: 1227 FLSSTEILFWKDLLDKYLYPIDEN 1250


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -1

Query: 762 NQWLSYQLCSQAVLAFLHALPCYQYF*PLY--FLIHLILH 649
           N  L + LC       L  LPC  YF   +  F IHL+ +
Sbjct: 190 NMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFY 229


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 199 CVVNSDLVTXCSLCRLR 249
           CV+N    T C  CRLR
Sbjct: 48  CVINKKNRTACKACRLR 64


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 698 HGNAWRKARTACEQS**LSHWFSVVSRYFSHTSTLSILEEYQNVC 832
           H N +R +   C  +    H   +  R + HT  + +L+E  N C
Sbjct: 281 HSNVYRYSCRDCSYATKYCHSLKIHLRRYGHTPNV-VLDEEGNPC 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,885
Number of Sequences: 336
Number of extensions: 4824
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35863589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)