Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_L02
(1227 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0303 - 3337454-3337544,3338358-3338521,3338624-3338805,333... 143 2e-34
06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334 134 1e-31
03_01_0459 + 3533718-3533916,3535009-3535150,3535290-3535410,353... 106 4e-23
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 104 1e-22
07_01_0680 + 5128023-5128212,5128629-5128667,5129496-5129637,512... 93 5e-19
02_05_1125 + 34282559-34282796,34283247-34283437,34283540-342836... 85 1e-16
12_02_1272 + 27475302-27475491,27476792-27476876,27477076-274771... 64 2e-10
07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893,832... 62 1e-09
01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011 59 8e-09
01_07_0284 - 42472309-42472359,42472778-42472864,42473384-424734... 50 5e-06
01_06_1457 + 37508187-37508421,37509012-37509109,37509791-375099... 47 3e-05
01_05_0508 - 22804809-22805231,22805775-22806797 37 0.037
>10_01_0303 -
3337454-3337544,3338358-3338521,3338624-3338805,
3339088-3339322
Length = 223
Score = 143 bits (347), Expect = 2e-34
Identities = 77/220 (35%), Positives = 123/220 (55%), Gaps = 7/220 (3%)
Frame = +3
Query: 261 MPILFSIVARGTVVLAKYATCQGNFTEVAEQFLSKIPPH-DDKLTYSHGNYLFHYI---- 425
M I++++VARGTVVLA+++ GN VA + L K+PP + +L ++ Y+FH +
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVSGNAGAVARRILEKLPPDAESRLCFAQDRYIFHVLRSPP 60
Query: 426 --AENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATE 599
A + L + C+ +D F R FL+L +I+ R + YAMN EF RVL +
Sbjct: 61 PAAADGLTFLCMANDTFGRRIPFLYLEDIQMRFIKNYGRIAHNALAYAMNDEFSRVLHQQ 120
Query: 600 MKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRA 779
M+++S + D ++R+ GE+ +MV NI+ + RGE++ LLV+K + + +R
Sbjct: 121 MEYFSSNPSADTLNRLRGEIH---TVMVDNIEKILDRGERISLLVDKTSTMQDSAFHFRK 177
Query: 780 TSRTLQRSLFWKNIKMYXXXXXXXXXXXYLIGAMACGGLA 899
SR L+R+L+ KN K+ YLI A CGGL+
Sbjct: 178 QSRRLRRALWMKNAKLLAVLTAVIVLLLYLIIAAFCGGLS 217
>06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334
Length = 197
Score = 134 bits (324), Expect = 1e-31
Identities = 62/191 (32%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Frame = +3
Query: 261 MPILFSIVARGTVVLAKYATCQGNFTEVAEQFLSKIPPH--DDKLTYSHGNYLFHYIAEN 434
M IL+++VARGTVVLA+++ N VA Q L ++P D ++Y+ Y+FH +
Sbjct: 1 MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD 60
Query: 435 KLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYS 614
+ C+ D+ R F FL +I R + Y MN EF RVL+ +M +YS
Sbjct: 61 GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS 120
Query: 615 ESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTL 794
+ D I+R+ GE+ +++ +M+ NID + RG++L++LV+K N+ ++ ++ +R
Sbjct: 121 NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF 180
Query: 795 QRSLFWKNIKM 827
+ + +W+N+K+
Sbjct: 181 RNTTWWRNVKL 191
>03_01_0459 +
3533718-3533916,3535009-3535150,3535290-3535410,
3535513-3535575,3535677-3535823
Length = 223
Score = 106 bits (254), Expect = 4e-23
Identities = 54/189 (28%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = +3
Query: 267 ILFSIVARGTVVLAKYATCQGNFTEVAEQFLSKIPPHDDKLTYSHGNYLFHYIAENKLVY 446
+++S VARG VVLA +A GNF VA Q L K+P +++ +Y+ + F+Y + Y
Sbjct: 9 LVYSFVARGAVVLADHAEVSGNFASVAAQCLQKLPSTNNRHSYNCDGHTFNYHVHDGFTY 68
Query: 447 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPY-AMNSEFGRVLATEMKHY-SES 620
+ + R F+ +K ++ E+G L MK+ +
Sbjct: 69 CVVATESAGRQLPVGFIERVKEDFSKKYSGGKAKNATANSLKREYGPKLKEHMKYCDAHP 128
Query: 621 RDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQR 800
++D +++V ++ E+K +M++NI+ + RGEK+ELLV+K ++L + + +R ++R
Sbjct: 129 EEIDKLAKVKAQVTEVKGVMMQNIEKVLDRGEKIELLVDKTEDLRSQAQDFRKAGTKIRR 188
Query: 801 SLFWKNIKM 827
++W+N+KM
Sbjct: 189 KMWWENMKM 197
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 104 bits (250), Expect = 1e-22
Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Frame = +3
Query: 267 ILFSIVARGTVVLAKYATCQGNFTEVAEQFLSKIPPHDDKLTYSHGNYLFHYIAENKLVY 446
++++ VARGTV+LA+Y GNFT +A Q L K+P ++K TY+ + F+Y+ E+ Y
Sbjct: 6 LIYAFVARGTVILAEYTEFTGNFTTIASQCLMKLPASNNKFTYNCDGHTFNYLVEDGFTY 65
Query: 447 FCITDDKFQRSRAFLFLNEIKRR-XXXXXXXXXXXXIPYAMNSEFGRVLATEMKH-YSES 620
+ + R FL+ +K ++N +FG L M++
Sbjct: 66 CVVAVESVGRQIPIAFLDRVKDDFTKRYAGGKAATAAANSLNRDFGSKLKEHMQYCVDHP 125
Query: 621 RDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYR 776
++ +++V ++ E+K +M++NI+ + RGEK+ELLV+K +NL + + +R
Sbjct: 126 EEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR 177
>07_01_0680 +
5128023-5128212,5128629-5128667,5129496-5129637,
5129727-5129847,5129951-5130013,5130114-5130203,
5130572-5130619,5131114-5131260
Length = 279
Score = 92.7 bits (220), Expect = 5e-19
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Frame = +3
Query: 267 ILFSIVARGTVVLAKYATCQGNFTEVAEQFLSKIPPHDDKLTYSHGNYLFHYIAENK--- 437
++++ VARGTVVLA+Y GNFT +A Q L K+P ++K TY+ + F+Y+ E+
Sbjct: 6 LIYAFVARGTVVLAEYTEFTGNFTTIAAQCLQKLPASNNKFTYNCDGHTFNYLVEDGFSS 65
Query: 438 ----------LVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPY-AMNSEFGR 584
L Y + + R FL+ +K ++N EFG
Sbjct: 66 NRIGILGIQGLAYCVVAVESVGRQIPIAFLDRVKEDFTKRYGGGKAATAAANSLNREFGS 125
Query: 585 VLATEMKH-YSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNL 752
L M++ ++ +++V ++ E+K +M++NI+ + RGEK+ELLV+K +NL
Sbjct: 126 KLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 182
>02_05_1125 +
34282559-34282796,34283247-34283437,34283540-34283629,
34283630-34283793,34284139-34284352
Length = 298
Score = 85.0 bits (201), Expect = 1e-16
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Frame = +3
Query: 267 ILFSIVARGTVVLAKYATCQ-GNFTEVAEQFLSKIPPHDD------KLTYSHGNYLFHYI 425
I ++ VARG VV+A++ N VA Q L ++ D ++Y+ ++FH
Sbjct: 4 IQYAAVARGAVVMAEHGDAAFPNAGAVARQILDRLSAGDGGGGGDCNISYTQDLHVFHVK 63
Query: 426 AENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMK 605
+ + C+ DD R F FL +I R + YAMN EF RVL +M
Sbjct: 64 RTDGVTALCMADDAAGRRIPFAFLEDIHGRFVKTYGRAALTALAYAMNDEFSRVLGQQMD 123
Query: 606 HYSESRDLDNISRVHGELDEL-------------------KN------IMVKNI-----D 695
+YS + D ISR+ GE+D+ KN + V+N+ D
Sbjct: 124 YYSNDPNADRISRMRGEMDQYFSYLSVVKLRVDGASYKFRKNDINENFLQVRNVMIDNID 183
Query: 696 NMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLFWKNIKM 827
+ RG++LELLV+K + ++ ++ +R + +++W+N+K+
Sbjct: 184 KVLERGDRLELLVDKTATMQGNTMRFKRQARRFRNTVWWRNVKL 227
>12_02_1272 +
27475302-27475491,27476792-27476876,27477076-27477196,
27477443-27477586
Length = 179
Score = 64.1 bits (149), Expect = 2e-10
Identities = 40/146 (27%), Positives = 71/146 (48%)
Frame = +3
Query: 267 ILFSIVARGTVVLAKYATCQGNFTEVAEQFLSKIPPHDDKLTYSHGNYLFHYIAENKLVY 446
+++++VARGTVVLA++ GNF ++A Q L K+P D++LTY+ + F+++ Y
Sbjct: 6 LIYAMVARGTVVLAEHTAYAGNFRDIAAQCLQKLPAGDNRLTYTCDAHTFNFLIHQGYAY 65
Query: 447 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSESRD 626
+ + R L+ IK + G + M H E
Sbjct: 66 CVVATESSGRQIPLALLDMIKE--------------DFNKRPRLGEQMKYCMDHPEE--- 108
Query: 627 LDNISRVHGELDELKNIMVKNIDNMA 704
+ +++V ++ E+K IM++NID A
Sbjct: 109 VSKLAKVKAQVSEVKGIMMENIDKAA 134
>07_01_0987 +
8320205-8320472,8321549-8321690,8321773-8321893,
8322190-8322264,8322784-8322846,8322934-8323086
Length = 273
Score = 61.7 bits (143), Expect = 1e-09
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Frame = +3
Query: 267 ILFSIVARGTVVLAKYATCQGNFTEVAEQFLSKIPPHDD---------KLTYSHGNYLFH 419
++++ VARGT VLA+Y GNF +A Q L ++P + +Y+ + F+
Sbjct: 23 LIYAFVARGTAVLAEYTEFTGNFPALAAQCLQRLPASGGGGSGGGAPARFSYACDGHTFN 82
Query: 420 YIAENKLVYFCITDDKFQRSRAFLFLNEIKRR-XXXXXXXXXXXXIPYAMNSEFGRVLAT 596
++ Y + + ++ + FL +K + ++N E+G V+
Sbjct: 83 FLLHRGYAYCVVAKESVPKNVSVAFLERLKDDFMKRYGGGKADTALAKSLNKEYGPVIKQ 142
Query: 597 EMKH-YSESRDLDNISRVHGELDELKNIMVKNIDNM 701
M++ S +++ +V ++ E+KNIM++NI+ +
Sbjct: 143 HMQYVLDHSEEIEKTLKVQAQVSEVKNIMLENIEKV 178
>01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011
Length = 199
Score = 58.8 bits (136), Expect = 8e-09
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +3
Query: 357 LSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXX 536
LSK +++ G YLFHYI E ++ Y + D + + AF +L ++K
Sbjct: 43 LSKGQHEASRMSIETGPYLFHYIIEGRVCYLTMCDCSYPKKLAFQYLEDLKNEFERVNGN 102
Query: 537 XXXXXI-PYAMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRG 713
PYA +F + K Y ++R N+++++ EL E+ IM +N + G
Sbjct: 103 QIETAARPYAF-IKFDTFIQKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNFQEVLGVG 161
Query: 714 EKLE 725
EKL+
Sbjct: 162 EKLD 165
>01_07_0284 -
42472309-42472359,42472778-42472864,42473384-42473449,
42474608-42474712,42475129-42475200,42475421-42475543
Length = 167
Score = 49.6 bits (113), Expect = 5e-06
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Frame = +3
Query: 429 ENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKH 608
+N L TDD + AF LN + N++ + L +
Sbjct: 41 DNGLCAIAFTDDHYPVRSAFSLLNTVLEEYHKTFGERWRTA--KTDNTQPWQYLDDALTK 98
Query: 609 YSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGS-VSYRATS 785
Y + + D + ++ +LDE K I+ K ID++ RGE+L+ LV K+ +L+ S + Y+
Sbjct: 99 YQDPAEADKLLKIQRDLDETKIILHKTIDSVLSRGERLDSLVEKSSDLSAASQMFYKQAK 158
Query: 786 RT 791
+T
Sbjct: 159 KT 160
>01_06_1457 +
37508187-37508421,37509012-37509109,37509791-37509904,
37510361-37510426,37510659-37510745,37510902-37511012
Length = 236
Score = 46.8 bits (106), Expect = 3e-05
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 399 HGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNS-E 575
H Y H N L DD + AF LN++ A ++ +
Sbjct: 77 HEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQKAFGDSWKAATKDATDAAQ 136
Query: 576 FGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLA 755
L + + + + D + ++ +LDE K I+ K I+++ RGE+L+ LV K+ +L+
Sbjct: 137 QWPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSSDLS 196
Query: 756 TGS 764
S
Sbjct: 197 AAS 199
>01_05_0508 - 22804809-22805231,22805775-22806797
Length = 481
Score = 36.7 bits (81), Expect = 0.037
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 237 VSFTRLFTMPILFSIVARGTVVLAKYATCQGNFTEVA--EQFLSKIPPHDDKLTYSHGNY 410
VSF R F +P+L ++ G + A+C N T VA ++ + IP H + Y + Y
Sbjct: 311 VSFIRSFNLPLL--LLGGGGYTINHVASCWCNETAVAIGKEIPNDIPKHGFDVFYKNQEY 368
Query: 411 LFHYIAENK 437
HY E K
Sbjct: 369 KLHYKLETK 377
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,712,655
Number of Sequences: 37544
Number of extensions: 459517
Number of successful extensions: 964
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -