Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_L02
(1227 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 62 8e-10
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin... 51 2e-06
AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein. 51 2e-06
AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein. 51 2e-06
AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical... 51 2e-06
Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical pr... 43 4e-04
Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical pr... 43 4e-04
Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical pr... 42 9e-04
AF239889-1|AAF45301.1| 118|Caenorhabditis elegans synaptobrevin... 42 9e-04
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 33 0.41
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 62.1 bits (144), Expect = 8e-10
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Frame = +3
Query: 333 FTEVAEQFLSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKR 512
++ A+ K+ + + G ++FHYI + + D F R AF +L++I +
Sbjct: 34 YSNQAKMLFKKLNGAPAQQSVESGPFVFHYIIVQNICALVLCDRNFPRKVAFQYLSDIGQ 93
Query: 513 RXXXXXXXXXXXXI-PYAMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKN 689
+ PY EF + + + Y ++ ++ V EL ++ IMV N
Sbjct: 94 EFLNENSSRIEQVVRPYHF-LEFDKYIQQAKQRYGDTNK-HAMNTVSNELQDVTRIMVTN 151
Query: 690 IDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQR 800
I+++ RGE L +L N+A L+ S YR ++ L R
Sbjct: 152 IEDVIHRGEALNILENRASELSGMSKKYRDDAKALNR 188
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 54.4 bits (125), Expect = 2e-07
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = +3
Query: 408 YLFH-YIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGR 584
YL H Y+ + L C+TD ++Q+ A FL + I + +
Sbjct: 66 YLVHCYVRNDGLSAVCVTDAEYQQRVAMSFLGRVLDDFTTRVPATQWPGIRSDKDCSYTG 125
Query: 585 VLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGS 764
L ++ + R+ D ++RV E++E K +M I ++ RGEKL+ LV K++NL+ S
Sbjct: 126 -LKDLLEKWQNPREADPMTRVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSENLSDQS 184
Query: 765 VSYRATSRTLQR 800
+ ++R + +
Sbjct: 185 KMFYTSARKMNK 196
>AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin
related protein 1 protein.
Length = 109
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 636 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLFWK 815
+ + ++DE+ IM N++ + R +KL L ++AD L G+ + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 816 NIKM 827
NIKM
Sbjct: 84 NIKM 87
>AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 636 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLFWK 815
+ + ++DE+ IM N++ + R +KL L ++AD L G+ + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 816 NIKM 827
NIKM
Sbjct: 84 NIKM 87
>AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +3
Query: 636 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLFWK 815
+ + ++DE+ IM N++ + R +KL L ++AD L G+ + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 816 NIKM 827
NIKM
Sbjct: 84 NIKM 87
>AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical
protein Y69A2AR.6 protein.
Length = 245
Score = 50.8 bits (116), Expect = 2e-06
Identities = 19/60 (31%), Positives = 40/60 (66%)
Frame = +3
Query: 645 VHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLFWKNIK 824
+ ++D+++ +M N++ + RGE+LE + N+ + L T + S+++T+R +QR KN+K
Sbjct: 159 IRRQVDDVRQVMADNVERIMERGERLENMENRTEALRTSATSFKSTARRVQRHFCQKNLK 218
>Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical
protein B0513.9b protein.
Length = 113
Score = 43.2 bits (97), Expect = 4e-04
Identities = 17/65 (26%), Positives = 38/65 (58%)
Frame = +3
Query: 630 DNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLF 809
+ + + ++D +K +MV N++ + RGE+L+ + +++ L S +++ T+R +QR
Sbjct: 16 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 75
Query: 810 WKNIK 824
N K
Sbjct: 76 MLNAK 80
>Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical
protein B0513.9a protein.
Length = 116
Score = 43.2 bits (97), Expect = 4e-04
Identities = 17/65 (26%), Positives = 38/65 (58%)
Frame = +3
Query: 630 DNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLF 809
+ + + ++D +K +MV N++ + RGE+L+ + +++ L S +++ T+R +QR
Sbjct: 19 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 78
Query: 810 WKNIK 824
N K
Sbjct: 79 MLNAK 83
>Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical
protein F23H12.1 protein.
Length = 118
Score = 41.9 bits (94), Expect = 9e-04
Identities = 17/58 (29%), Positives = 39/58 (67%)
Frame = +3
Query: 654 ELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLFWKNIKM 827
+++E+ ++M N++ + R +L L ++A+ L G+ ++ +SRTL++ +W+NI+M
Sbjct: 40 QVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYWWQNIRM 97
>AF239889-1|AAF45301.1| 118|Caenorhabditis elegans
synaptobrevin-like protein protein.
Length = 118
Score = 41.9 bits (94), Expect = 9e-04
Identities = 17/58 (29%), Positives = 39/58 (67%)
Frame = +3
Query: 654 ELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATGSVSYRATSRTLQRSLFWKNIKM 827
+++E+ ++M N++ + R +L L ++A+ L G+ ++ +SRTL++ +W+NI+M
Sbjct: 40 QVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYWWQNIRM 97
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 33.1 bits (72), Expect = 0.41
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 315 ATCQGNFTEVAEQFLSKIPPHDDKLTYSHGNYLFH 419
ATC G+ T V Q + I P + ++TYS G+ + H
Sbjct: 1175 ATCSGSSTAVGSQCIGVIVPTNAQVTYSDGSMVLH 1209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,056,176
Number of Sequences: 27780
Number of extensions: 450841
Number of successful extensions: 1116
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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