Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L02
         (1227 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    24   3.1  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   4.1  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    23   4.1  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    23   4.1  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   4.1  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   5.4  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 169 NILFHYLKKVCVVNSDLVTXCSLCRLRDYSQCLY 270
           N+L H  + +C V  D+ +  +L RL+ Y  C Y
Sbjct: 16  NVLLHG-QVICFVCKDITSTSALYRLKLYLFCDY 48


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 265 GIVNNRVNDTKNTMLPNHYLQRTPSLGNGIK 173
           G  N+ +ND KN + P    +R P    G++
Sbjct: 66  GKKNSIINDVKNELFPEDINKRAPMGFQGMR 96


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 265 GIVNNRVNDTKNTMLPNHYLQRTPSLGNGIK 173
           G  N+ +ND KN + P    +R P    G++
Sbjct: 67  GKKNSIINDVKNELFPEDINKRAPMGFQGMR 97


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 265 GIVNNRVNDTKNTMLPNHYLQRTPSLGNGIK 173
           G  N+ +ND KN + P    +R P    G++
Sbjct: 66  GKKNSIINDVKNELFPEDINKRAPMGFQGMR 96


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 265 GIVNNRVNDTKNTMLPNHYLQRTPSLGNGIK 173
           G  N+ +ND KN + P    +R P    G++
Sbjct: 66  GKKNSIINDVKNELFPEDINKRAPMGFQGMR 96


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 414 IDNFRESMSTYRRGAESSIKTAL 346
           ID FRE  S YR+      KT +
Sbjct: 29  IDEFREMTSKYRKKCIGETKTTI 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 289,993
Number of Sequences: 438
Number of extensions: 6131
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41781924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)