Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L01
         (1269 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377...    36   0.051
02_04_0583 + 24078766-24079800,24080585-24081643                       30   4.5  

>02_05_1331 + 35736543-35736638,35737407-35737525,35737670-35737715,
            35738117-35738172,35738452-35738547,35738844-35738961,
            35739406-35739672,35740023-35740124,35740302-35740659,
            35740750-35740863,35741045-35741676,35741895-35742103,
            35742597-35742819,35743419-35743538,35743888-35743914,
            35744281-35745045,35745431-35748511
          Length = 2142

 Score = 36.3 bits (80), Expect = 0.051
 Identities = 15/48 (31%), Positives = 31/48 (64%)
 Frame = +3

Query: 132  RCNVAVMLLCDVVLDGVEIDWSIHVPLMLHIVFLGMDHTRWIVHQHCR 275
            R ++A++LL ++  +  E D+  ++PL+ H+  + MD +  IV +HC+
Sbjct: 1535 RADIALILLAEIAYENDE-DFRENLPLLFHVTCVSMDSSEDIVLEHCQ 1581


>02_04_0583 + 24078766-24079800,24080585-24081643
          Length = 697

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 599 LRLGVFRDRVRVRLAGYDH-RERREVVSFTFGCGLR 495
           +R G+ RDRVR  L GY H  E +E+  F    G+R
Sbjct: 148 VRDGMQRDRVRAELRGYLHCEEVKEMTRFASDVGIR 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,224,431
Number of Sequences: 37544
Number of extensions: 408384
Number of successful extensions: 1208
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)