Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L01
         (1269 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.      129   9e-30
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P...   129   9e-30
AY113213-1|AAM29218.1|  975|Drosophila melanogaster AT07178p pro...    33   0.63 
AE013599-1778|AAM71009.1|  975|Drosophila melanogaster CG30485-P...    33   0.63 

>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
          Length = 3479

 Score =  129 bits (311), Expect = 9e-30
 Identities = 61/118 (51%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
 Frame = +3

Query: 90   EYLPDSNQPISGFHRCNVAVMLLCDVVLDGVE-IDWSIHVPLMLHIVFLGMDHTRWIVHQ 266
            E+LPD + PISGFHRCNVAVMLL D+V+DG+  IDW++H+PLMLHI+FLG+DHTR IV +
Sbjct: 1977 EFLPDVSLPISGFHRCNVAVMLLTDIVVDGIPGIDWTLHLPLMLHILFLGLDHTRIIVRE 2036

Query: 267  HCRQXXXXXXXXXXXXXXXXXXXKTLLASRSAQLGLG-TPPTLPIVQHNFTEPDASFD 437
            HC+Q                   + LL S +++L LG T P LP++ +NFTE    FD
Sbjct: 2037 HCKQLCVNLLIVLAEHNDHLTVARILLNSETSKLDLGLTVPALPVIDNNFTELHQQFD 2094



 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = +3

Query: 624  VIKSLVHFLANRPTHMPLWQYEDITAKVWTLRSCQQMQTLVGHVLRVFRESLPXALVSER 803
            VIKSL+ FLA + T  PLW YEDITAKVW ++S +Q+   + H+++VF +S P A ++ER
Sbjct: 2190 VIKSLLKFLA-QDTCQPLWNYEDITAKVWAVKSAEQLSCFLKHMVKVFADSYPQARIAER 2248

Query: 804  WAXTXLXLGLSCPSRXY 854
            WA T L LGLSC SR Y
Sbjct: 2249 WAQTALQLGLSCSSRHY 2265



 Score = 31.5 bits (68), Expect = 2.5
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +1

Query: 904  RMVSXILSXXVEXVXXQGENMXGXXXEXLXXL 999
            RM+S ILS  VE V  QGE+M G   E L  L
Sbjct: 2283 RMLSDILSRLVETVAEQGEDMQGYVTELLLTL 2314


>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
            isoform B protein.
          Length = 3479

 Score =  129 bits (311), Expect = 9e-30
 Identities = 61/118 (51%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
 Frame = +3

Query: 90   EYLPDSNQPISGFHRCNVAVMLLCDVVLDGVE-IDWSIHVPLMLHIVFLGMDHTRWIVHQ 266
            E+LPD + PISGFHRCNVAVMLL D+V+DG+  IDW++H+PLMLHI+FLG+DHTR IV +
Sbjct: 1977 EFLPDVSLPISGFHRCNVAVMLLTDIVVDGIPGIDWTLHLPLMLHILFLGLDHTRIIVRE 2036

Query: 267  HCRQXXXXXXXXXXXXXXXXXXXKTLLASRSAQLGLG-TPPTLPIVQHNFTEPDASFD 437
            HC+Q                   + LL S +++L LG T P LP++ +NFTE    FD
Sbjct: 2037 HCKQLCVNLLIVLAEHNDHLTVARILLNSETSKLDLGLTVPALPVIDNNFTELHQQFD 2094



 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = +3

Query: 624  VIKSLVHFLANRPTHMPLWQYEDITAKVWTLRSCQQMQTLVGHVLRVFRESLPXALVSER 803
            VIKSL+ FLA + T  PLW YEDITAKVW ++S +Q+   + H+++VF +S P A ++ER
Sbjct: 2190 VIKSLLKFLA-QDTCQPLWNYEDITAKVWAVKSAEQLSCFLKHMVKVFADSYPQARIAER 2248

Query: 804  WAXTXLXLGLSCPSRXY 854
            WA T L LGLSC SR Y
Sbjct: 2249 WAQTALQLGLSCSSRHY 2265



 Score = 31.5 bits (68), Expect = 2.5
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +1

Query: 904  RMVSXILSXXVEXVXXQGENMXGXXXEXLXXL 999
            RM+S ILS  VE V  QGE+M G   E L  L
Sbjct: 2283 RMLSDILSRLVETVAEQGEDMQGYVTELLLTL 2314


>AY113213-1|AAM29218.1|  975|Drosophila melanogaster AT07178p
           protein.
          Length = 975

 Score = 33.5 bits (73), Expect = 0.63
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 487 LRDRTCDLGECAHWGCLSND 428
           LR+R+C    C+HW C SND
Sbjct: 775 LRNRSCSSDSCSHWSCHSND 794


>AE013599-1778|AAM71009.1|  975|Drosophila melanogaster CG30485-PA
           protein.
          Length = 975

 Score = 33.5 bits (73), Expect = 0.63
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 487 LRDRTCDLGECAHWGCLSND 428
           LR+R+C    C+HW C SND
Sbjct: 775 LRNRSCSSDSCSHWSCHSND 794


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,510,555
Number of Sequences: 53049
Number of extensions: 675653
Number of successful extensions: 2319
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2307
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6824990175
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)