Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K24
         (1220 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L33075-1|AAA59187.1| 1657|Homo sapiens ras GTPase-activating-lik...    31   8.5  
D29640-1|BAA06123.2| 1678|Homo sapiens KIAA0051 protein.               31   8.5  
BC139731-1|AAI39732.1| 1657|Homo sapiens IQ motif containing GTP...    31   8.5  

>L33075-1|AAA59187.1| 1657|Homo sapiens ras GTPase-activating-like
            protein protein.
          Length = 1657

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +2

Query: 299  VMDLNSSFTTVIASSSDLERVVRVTQRGFTLVVVNRIHALFGYDVVSHAMAMTNANRELV 478
            +M +     T+I S+  LE  + +      L+V N+I      DVVSH+  +T  N+E +
Sbjct: 889  LMKMREEVITLIRSNQQLENDLNLMDIKIGLLVKNKITL---QDVVSHSKKLTKKNKEQL 945

Query: 479  SFTM 490
            S  M
Sbjct: 946  SDMM 949


>D29640-1|BAA06123.2| 1678|Homo sapiens KIAA0051 protein.
          Length = 1678

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +2

Query: 299  VMDLNSSFTTVIASSSDLERVVRVTQRGFTLVVVNRIHALFGYDVVSHAMAMTNANRELV 478
            +M +     T+I S+  LE  + +      L+V N+I      DVVSH+  +T  N+E +
Sbjct: 910  LMKMREEVITLIRSNQQLENDLNLMDIKIGLLVKNKITL---QDVVSHSKKLTKKNKEQL 966

Query: 479  SFTM 490
            S  M
Sbjct: 967  SDMM 970


>BC139731-1|AAI39732.1| 1657|Homo sapiens IQ motif containing GTPase
            activating protein 1 protein.
          Length = 1657

 Score = 31.1 bits (67), Expect = 8.5
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +2

Query: 299  VMDLNSSFTTVIASSSDLERVVRVTQRGFTLVVVNRIHALFGYDVVSHAMAMTNANRELV 478
            +M +     T+I S+  LE  + +      L+V N+I      DVVSH+  +T  N+E +
Sbjct: 889  LMKMREEVITLIRSNQQLENDLNLMDIKIGLLVKNKITL---QDVVSHSKKLTKKNKEQL 945

Query: 479  SFTM 490
            S  M
Sbjct: 946  SDMM 949


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,562,623
Number of Sequences: 237096
Number of extensions: 1907592
Number of successful extensions: 3666
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3657
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17284516220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)