Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K23
         (1225 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   1.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   2.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    24   3.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   5.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   7.2  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   7.2  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    23   7.2  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect(2) = 1.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 498 HGPHSLRGRDSWTPEGS 448
           HG H L G  S  P GS
Sbjct: 138 HGLHGLHGLSSSAPTGS 154



 Score = 21.4 bits (43), Expect(2) = 1.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 570 KERNSRDI*SCRRGAGILFPTTACHGPHSLRG 475
           KE+ SR+    RR    L   T  HG H L G
Sbjct: 111 KEQLSREQRFLRRRLEQLTNQTGLHGLHGLHG 142


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 252 FLLRYRCLTHLCLCLPSDILYVYEIW-LNRI 163
           +LL  +CLT +CL   S I+    +W +N+I
Sbjct: 381 YLLGIQCLTVVCLAFWSFIVSTILLWFINKI 411


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+ ++ PG    + + +PR  H RL RE
Sbjct: 63  EAEPKAEPGNNRPIYIPQPRPPHPRLRRE 91



 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 91  EAESEAEPGNNRPVYIPQPRPPHPRLRRE 119


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
            channel protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 1004 VTSCLXAKNXYPSSTTWCARQIKSNSCLDQNL 909
            V SC      YP  T  C+  I+S S   Q+L
Sbjct: 129  VLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 62  EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 90



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 118 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 146



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 174 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 202



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 202 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 230



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 230 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 258


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 35  EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 63



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 63  EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 91



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 91  EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 119


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 34  EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 62



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 62  EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 90



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 90  EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 118



 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 779 EADGRSRPGFALRLALVRPRQGHGRLGRE 865
           EA+  + PG    + + +PR  H RL RE
Sbjct: 118 EAEPEAEPGNNRPVYIPQPRPPHPRLRRE 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,474
Number of Sequences: 438
Number of extensions: 7305
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41661861
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)