Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K22
         (1387 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.97 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   9.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.97
 Identities = 21/84 (25%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
 Frame = +1

Query: 583 PPKXGGXPGKXXFAXGX-PXXPPP*XGXVXGVFSXXPPPPXKXXKXSXXXXXXXXXXXAX 759
           PP   G  G+        P  PPP  G V  +     PPP    +               
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPA 571

Query: 760 XXXXXX---PPXNPPGXPPXXPTP 822
                    PP  PP  PP  P P
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 26.2 bits (55), Expect = 2.2
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -1

Query: 1162 FXPXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEK 1046
            F     A PPP     PP  PP       P G  P G +
Sbjct: 573  FPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLG-GPAGSR 610


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 3.9
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +3

Query: 1140 GAPXXGXKKKKXXXGXPPPPXXPPP 1214
            G P           G PPPP  PPP
Sbjct: 767  GMPSPSRSAFADGIGSPPPPPPPPP 791


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 9.0
 Identities = 14/43 (32%), Positives = 15/43 (34%)
 Frame = -1

Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKGXLPR 1028
            P    PP P      P   P    P  P G  P G + G  PR
Sbjct: 206  PTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVP-GMQPGMQPR 247


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 9.0
 Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
 Frame = -1

Query: 1147 GAPPPPXXXXXPPQXPPXGXXPXXPXG-XXPXGEK 1046
            GAP         PQ PP    P  P G   P G+K
Sbjct: 696  GAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDK 730


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 928,745
Number of Sequences: 2352
Number of extensions: 18291
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 160119630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)