Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_K22
(1387 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 40 0.003
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.010
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.010
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.010
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.039
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.039
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.039
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.068
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.068
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.12
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.12
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.21
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.63
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 33 0.63
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 32 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 2.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 4.4
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 5.9
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 5.9
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 5.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.9
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 5.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 7.8
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/61 (34%), Positives = 23/61 (37%)
Frame = -1
Query: 1144 APPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKXPPPPXXKXG 965
APPPP PP PP G P P G P G P + PPPP +
Sbjct: 706 APPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNK-PPPPMFQQGFNAGAPPPPFGRGA 764
Query: 964 G 962
G
Sbjct: 765 G 765
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.010
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKXPPPP 980
P G+PPPP PP PP G P P G P + G P + PPP
Sbjct: 259 PAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGE-KKGXLP---RGGXXKXKXXEKXP 989
P G+PPPP PP PP P P P G G LP GG P
Sbjct: 275 PPTGSPPPPPAGGSPP--PPRAGSPPPP--PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Query: 988 PPPXXK 971
PPP K
Sbjct: 331 PPPRQK 336
Score = 34.7 bits (76), Expect = 0.16
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPP-----XGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKX 992
P G+PPPP PP PP G P G P G P K + E+
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 343
Query: 991 PP 986
PP
Sbjct: 344 PP 345
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKG--XLPRGGXXKXKXXEKXPPP 983
P G+PPPP P G P P P + G P G PPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 982 P 980
P
Sbjct: 292 P 292
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXX 687
P +P G PPP PP+ G P G P PPP G +
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSP-PPPPAGGSPPPPRAGS 296
Query: 688 PPPP 699
PPPP
Sbjct: 297 PPPP 300
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 1023 PPRGKXPFFSPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPX 1202
PP+G P P G P G P G G PPPP
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP- 300
Query: 1203 XPPP 1214
PPP
Sbjct: 301 -PPP 303
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = -1
Query: 1147 GAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKG--XLPRGGXXKXKXXEKXPPPP 980
G P PP PP G P G P G PR G PPPP
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.1 bits (62), Expect = 7.8
Identities = 28/104 (26%), Positives = 29/104 (27%)
Frame = +1
Query: 559 PPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPPXKXXKXSXXXXXX 738
PP G PP G P A PPP G + PPPP S
Sbjct: 232 PPAGSPPPPPPPKGSP---PLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPA 285
Query: 739 XXXXXAXXXXXXXPPXNPPGXPPXXPTPXXXXXTXPXFSPRGXG 870
PP P G PP P P P G G
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTG 327
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.010
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKXPPPP 980
P G+PPPP PP PP G P P G P + G P + PPP
Sbjct: 280 PAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGE-KKGXLP---RGGXXKXKXXEKXP 989
P G+PPPP PP PP P P P G G LP GG P
Sbjct: 296 PPTGSPPPPPAGGSPP--PPRAGSPPPP--PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Query: 988 PPPXXK 971
PPP K
Sbjct: 352 PPPRQK 357
Score = 34.7 bits (76), Expect = 0.16
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPP-----XGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKX 992
P G+PPPP PP PP G P G P G P K + E+
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 364
Query: 991 PP 986
PP
Sbjct: 365 PP 366
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKG--XLPRGGXXKXKXXEKXPPP 983
P G+PPPP P G P P P + G P G PPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 982 P 980
P
Sbjct: 313 P 313
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXX 687
P +P G PPP PP+ G P G P PPP G +
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSP-PPPPAGGSPPPPRAGS 317
Query: 688 PPPP 699
PPPP
Sbjct: 318 PPPP 321
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 1023 PPRGKXPFFSPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPX 1202
PP+G P P G P G P G G PPPP
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP- 321
Query: 1203 XPPP 1214
PPP
Sbjct: 322 -PPP 324
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = -1
Query: 1147 GAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKG--XLPRGGXXKXKXXEKXPPPP 980
G P PP PP G P G P G PR G PPPP
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.1 bits (62), Expect = 7.8
Identities = 28/104 (26%), Positives = 29/104 (27%)
Frame = +1
Query: 559 PPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPPXKXXKXSXXXXXX 738
PP G PP G P A PPP G + PPPP S
Sbjct: 253 PPAGSPPPPPPPKGSP---PLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPA 306
Query: 739 XXXXXAXXXXXXXPPXNPPGXPPXXPTPXXXXXTXPXFSPRGXG 870
PP P G PP P P P G G
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTG 348
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.010
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKXPPPP 980
P G+PPPP PP PP G P P G P + G P + PPP
Sbjct: 265 PAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 34.7 bits (76), Expect = 0.16
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGE-KKGXLP---RGGXXKXKXXEKXP 989
P G+PPPP PP PP P P P G G LP GG P
Sbjct: 281 PPTGSPPPPPAGGSPP--PPRAGSPPPP--PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Query: 988 PPPXXK 971
PPP K
Sbjct: 337 PPPRQK 342
Score = 34.7 bits (76), Expect = 0.16
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPP-----XGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKX 992
P G+PPPP PP PP G P G P G P K + E+
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 349
Query: 991 PP 986
PP
Sbjct: 350 PP 351
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKG--XLPRGGXXKXKXXEKXPPP 983
P G+PPPP P G P P P + G P G PPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 982 P 980
P
Sbjct: 298 P 298
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXX 687
P +P G PPP PP+ G P G P PPP G +
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSP-PPPPAGGSPPPPRAGS 302
Query: 688 PPPP 699
PPPP
Sbjct: 303 PPPP 306
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 1023 PPRGKXPFFSPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPX 1202
PP+G P P G P G P G G PPPP
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP- 306
Query: 1203 XPPP 1214
PPP
Sbjct: 307 -PPP 309
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = -1
Query: 1147 GAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKKG--XLPRGGXXKXKXXEKXPPPP 980
G P PP PP G P G P G PR G PPPP
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.1 bits (62), Expect = 7.8
Identities = 28/104 (26%), Positives = 29/104 (27%)
Frame = +1
Query: 559 PPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPPXKXXKXSXXXXXX 738
PP G PP G P A PPP G + PPPP S
Sbjct: 238 PPAGSPPPPPPPKGSP---PLAGSGSPPPPPAAGSPPPPRTGSPPPP---PTGSPPPPPA 291
Query: 739 XXXXXAXXXXXXXPPXNPPGXPPXXPTPXXXXXTXPXFSPRGXG 870
PP P G PP P P P G G
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP--PPAGTG 333
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = +1
Query: 550 GXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPP 699
G PPP PP GG P G P PPP G F PPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPP 787
Score = 34.7 bits (76), Expect = 0.16
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXX----PPQXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEK-- 995
P G PPPP PP PP G P G P G P G
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 994 -XPPPPXXKXGG 962
PPPP GG
Sbjct: 768 CPPPPPPPPPGG 779
Score = 34.3 bits (75), Expect = 0.21
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPP-P*XGXVXGVFSX 684
P P GG PPP G PP GG P G P PP P G G
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG--GP 784
Query: 685 XPPPP 699
PPPP
Sbjct: 785 PPPPP 789
Score = 33.1 bits (72), Expect = 0.48
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +1
Query: 550 GXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPP 699
G PP G PP GG P G P PPP G + + PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPP----ITGGPPPPPP-PGGLPPISGGPPPPP 762
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 8/63 (12%)
Frame = -1
Query: 1195 GGGXPXXXFFFFXPXXGAPPPPXXXXX--------PPQXPPXGXXPXXPXGXXPXGEKKG 1040
GG P P G PPPP PP PP G P P P G K G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 1039 XLP 1031
P
Sbjct: 784 PPP 786
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP 651
P P GG PPP G PP P F G P PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 1141 PPPPXXXXXPPQXPPXGXXPXXPXGXXPXG 1052
PPPP PP PP G P P G
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 7.8
Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 966 PXXXXGGGGXFSXXFXXXXPPRGKXPFFS-PXGXXPXGXXGXXPXGGXWGGXXKXXGGGG 1142
P GG PP G P P P G G P G G GG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITG--GPPPPPPPGGL 751
Query: 1143 APXXGXKKKKXXX--GXPPPPXXPPP 1214
P G G PPPP PPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 216 PPFGGGPXXPXXKXXXXGXGPPPPXRG 296
PP GGP P G PPPP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG 733
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = +1
Query: 550 GXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPP 699
G PPP PP GG P G P PPP G F PPPP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPP 787
Score = 34.7 bits (76), Expect = 0.16
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXX----PPQXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEK-- 995
P G PPPP PP PP G P G P G P G
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 994 -XPPPPXXKXGG 962
PPPP GG
Sbjct: 768 CPPPPPPPPPGG 779
Score = 34.3 bits (75), Expect = 0.21
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPP-P*XGXVXGVFSX 684
P P GG PPP G PP GG P G P PP P G G
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG--GP 784
Query: 685 XPPPP 699
PPPP
Sbjct: 785 PPPPP 789
Score = 33.1 bits (72), Expect = 0.48
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +1
Query: 550 GXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPP 699
G PP G PP GG P G P PPP G + + PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPP----ITGGPPPPPP-PGGLPPISGGPPPPP 762
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 8/63 (12%)
Frame = -1
Query: 1195 GGGXPXXXFFFFXPXXGAPPPPXXXXX--------PPQXPPXGXXPXXPXGXXPXGEKKG 1040
GG P P G PPPP PP PP G P P P G K G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 1039 XLP 1031
P
Sbjct: 784 PPP 786
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP 651
P P GG PPP G PP P F G P PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 1141 PPPPXXXXXPPQXPPXGXXPXXPXGXXPXG 1052
PPPP PP PP G P P G
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 7.8
Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 966 PXXXXGGGGXFSXXFXXXXPPRGKXPFFS-PXGXXPXGXXGXXPXGGXWGGXXKXXGGGG 1142
P GG PP G P P P G G P G G GG
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITG--GPPPPPPPGGL 751
Query: 1143 APXXGXKKKKXXX--GXPPPPXXPPP 1214
P G G PPPP PPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 216 PPFGGGPXXPXXKXXXXGXGPPPPXRG 296
PP GGP P G PPPP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG 733
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = +1
Query: 550 GXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPP 699
G PPP PP GG P G P PPP G F PPPP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPP 370
Score = 34.7 bits (76), Expect = 0.16
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Frame = -1
Query: 1156 PXXGAPPPPXXXXX----PPQXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEK-- 995
P G PPPP PP PP G P G P G P G
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 994 -XPPPPXXKXGG 962
PPPP GG
Sbjct: 351 CPPPPPPPPPGG 362
Score = 34.3 bits (75), Expect = 0.21
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPP-P*XGXVXGVFSX 684
P P GG PPP G PP GG P G P PP P G G
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGL---PPISGGPPPPPPPPGGCPPPPPPPPPGGFKG--GP 367
Query: 685 XPPPP 699
PPPP
Sbjct: 368 PPPPP 372
Score = 33.1 bits (72), Expect = 0.48
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +1
Query: 550 GXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPP 699
G PP G PP GG P G P PPP G + + PPPP
Sbjct: 301 GLPPITGGPPPPPPPGGLPP----ITGGPPPPPP-PGGLPPISGGPPPPP 345
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 8/63 (12%)
Frame = -1
Query: 1195 GGGXPXXXFFFFXPXXGAPPPPXXXXX--------PPQXPPXGXXPXXPXGXXPXGEKKG 1040
GG P P G PPPP PP PP G P P P G K G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 1039 XLP 1031
P
Sbjct: 367 PPP 369
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 508 PKXXXAPVXWGGXXGXPPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP 651
P P GG PPP G PP P F G P PPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPP---PPPGGFKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 1141 PPPPXXXXXPPQXPPXGXXPXXPXGXXPXG 1052
PPPP PP PP G P P G
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 7.8
Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +3
Query: 966 PXXXXGGGGXFSXXFXXXXPPRGKXPFFS-PXGXXPXGXXGXXPXGGXWGGXXKXXGGGG 1142
P GG PP G P P P G G P G G GG
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITG--GPPPPPPPGGL 334
Query: 1143 APXXGXKKKKXXX--GXPPPPXXPPP 1214
P G G PPPP PPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 216 PPFGGGPXXPXXKXXXXGXGPPPPXRG 296
PP GGP P G PPPP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPG 316
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = +3
Query: 1050 SPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPXXPPPXXKXV 1229
S G G G GG GG G G+ G PPPP PPP V
Sbjct: 259 SSGGGYSTGGGGGYAGGGG-GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPV 317
Query: 1230 FFFXXXKNXPGGGGG 1274
GGGG
Sbjct: 318 SSGGGYSEQSSGGGG 332
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = +3
Query: 1050 SPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPXXPPPXXKXV 1229
S G G G GG GG G G+ G PPPP PPP V
Sbjct: 259 SSGGGYSTGGGGGYAGGGG-GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPV 317
Query: 1230 FFFXXXKNXPGGGGG 1274
GGGG
Sbjct: 318 SSGGGYSEQSSGGGG 332
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/90 (26%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = +1
Query: 556 PPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGV--FSXXPPPPXKXXKXSXXX 729
PPP PP PG+ G P PPP G PPPP +
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGM 347
Query: 730 XXXXXXXXAXXXXXXXPPXNPPGXPPXXPT 819
PP PP PP P+
Sbjct: 348 PPPPPPRYPSAGPGMYPPP-PPSRPPAPPS 376
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/90 (26%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = +1
Query: 556 PPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGV--FSXXPPPPXKXXKXSXXX 729
PPP PP PG+ G P PPP G PPPP +
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGM 357
Query: 730 XXXXXXXXAXXXXXXXPPXNPPGXPPXXPT 819
PP PP PP P+
Sbjct: 358 PPPPPPRYPSAGPGMYPPP-PPSRPPAPPS 386
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.21
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +1
Query: 556 PPPXGXFXXPPKXGG-XPGKXXFAXGXPXXPPP*XGXV---XGVFSXXPPPP 699
P P G PP GG P FA G P PPP G + +F PPPP
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIP-PPPPMMGGIPPPPPMFGAPPPPP 118
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.63
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +3
Query: 981 GGGGXFSXXFXXXXPPRGKXPFFSPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGX 1160
GGGG PP G G G GG GG GGGG G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGG 102
Query: 1161 KKKKXXXGXPPPP 1199
PPPP
Sbjct: 103 GGCGGGCAPPPPP 115
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like (grd
related) protein29 protein.
Length = 172
Score = 32.7 bits (71), Expect = 0.63
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 1059 GXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPXXPP 1211
G G G GG GG GGGG G G PPPP PP
Sbjct: 27 GAGGCGGGGGCGGGGGCGGGCGYGGGGGCGYGGG----YGCGIPPPPPPPP 73
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -1
Query: 1213 GGGXXGGGGXPXXXFFFFXPXXGAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGEKK 1043
GGG GGG P P PPPP PP PP P P G KK
Sbjct: 24 GGGGGGGGCAPAA------PACAPPPPPMCGCAPPPPPP----PPPPMCGCGCGRKK 70
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 1.5
Identities = 34/124 (27%), Positives = 35/124 (28%)
Frame = -2
Query: 888 GXGKXPPXPPGGKXGXGXXXXXXGXXXGGXXGGVXRGXXPGXXXSXXXXXXXXXXXXXFX 709
G G PP PGG G G GG G P
Sbjct: 97 GLGGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGP--GGPPPFGQPFQQAPQGMFNVPTGP 154
Query: 708 XFSXGGGXXGKNPXNXXXLGGXXXRGPXGKXXFSGVXPXFXGXXKXPPXGGXTXXPPPXN 529
GGG + P GG GP G G P G PP G PPP
Sbjct: 155 PPLMGGGGDPRGPP-----GGMG--GPPGHGGMGG--PPGHGGQGGPPGHGGMGGPPPGQ 205
Query: 528 GGXG 517
GG G
Sbjct: 206 GGPG 209
Score = 29.9 bits (64), Expect = 4.4
Identities = 33/120 (27%), Positives = 37/120 (30%), Gaps = 4/120 (3%)
Frame = +3
Query: 1032 GKXPFFSPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPXXPP 1211
G P P G P G +GG G GG P G ++ G P PP
Sbjct: 99 GGPPPGMPGGVPPQAQPFNPHGGSMFGGPG---GPGGPPPFGQPFQQAPQGMFNVPTGPP 155
Query: 1212 PXXKXVFFFXXXKNXPGGGGGFXXXXXXFXP----XXGFXXXFFFXGGXPPGXXPPXGVG 1379
P + PGG GG P G GG PPG P G G
Sbjct: 156 PLMGG---GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPG 212
Score = 29.5 bits (63), Expect = 5.9
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +3
Query: 1026 PRGKXPFFSPXGXX--PXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPP 1199
P G P G P G G P G GG G GG P G G PPP
Sbjct: 151 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHG------GMGGPPPG 204
Query: 1200 XXPP 1211
P
Sbjct: 205 QGGP 208
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 1.5
Identities = 34/124 (27%), Positives = 35/124 (28%)
Frame = -2
Query: 888 GXGKXPPXPPGGKXGXGXXXXXXGXXXGGXXGGVXRGXXPGXXXSXXXXXXXXXXXXXFX 709
G G PP PGG G G GG G P
Sbjct: 377 GLGGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGP--GGPPPFGQPFQQAPQGMFNVPTGP 434
Query: 708 XFSXGGGXXGKNPXNXXXLGGXXXRGPXGKXXFSGVXPXFXGXXKXPPXGGXTXXPPPXN 529
GGG + P GG GP G G P G PP G PPP
Sbjct: 435 PPLMGGGGDPRGPP-----GGMG--GPPGHGGMGG--PPGHGGQGGPPGHGGMGGPPPGQ 485
Query: 528 GGXG 517
GG G
Sbjct: 486 GGPG 489
Score = 29.9 bits (64), Expect = 4.4
Identities = 33/120 (27%), Positives = 37/120 (30%), Gaps = 4/120 (3%)
Frame = +3
Query: 1032 GKXPFFSPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPPXXPP 1211
G P P G P G +GG G GG P G ++ G P PP
Sbjct: 379 GGPPPGMPGGVPPQAQPFNPHGGSMFGGPG---GPGGPPPFGQPFQQAPQGMFNVPTGPP 435
Query: 1212 PXXKXVFFFXXXKNXPGGGGGFXXXXXXFXP----XXGFXXXFFFXGGXPPGXXPPXGVG 1379
P + PGG GG P G GG PPG P G G
Sbjct: 436 PLMGG---GGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPG 492
Score = 29.5 bits (63), Expect = 5.9
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +3
Query: 1026 PRGKXPFFSPXGXX--PXGXXGXXPXGGXWGGXXKXXGGGGAPXXGXKKKKXXXGXPPPP 1199
P G P G P G G P G GG G GG P G G PPP
Sbjct: 431 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHG------GMGGPPPG 484
Query: 1200 XXPP 1211
P
Sbjct: 485 QGGP 488
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 354 RGGQKXQGXPXFPXXTVXPPPXTGG-GXPXHXXXXXXXGXXDPP 226
RGGQ+ +G P P PP GG G P H G PP
Sbjct: 195 RGGQRSRGLPG-PSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPP 237
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/77 (27%), Positives = 24/77 (31%)
Frame = +3
Query: 981 GGGGXFSXXFXXXXPPRGKXPFFSPXGXXPXGXXGXXPXGGXWGGXXKXXGGGGAPXXGX 1160
GGGG + G + G G G GG G GGGG G
Sbjct: 75 GGGGGYGGGHGGAAVGGG---YGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGGGC 131
Query: 1161 KKKKXXXGXPPPPXXPP 1211
+ PP P PP
Sbjct: 132 QCSPSSNTCPPGPRGPP 148
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical protein
T01B7.7 protein.
Length = 348
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -1
Query: 1147 GAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGE-KKGXLPRGGXXKXKXXEKXPPP 983
GA P P P G P P G P G G PRGG E PP
Sbjct: 96 GASQPAPPEKFPDGIPNGGNQPKFPGGGFPDGPFPNGGGPRGGNQCQCTVENSCPP 151
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.elegans
collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = -1
Query: 1147 GAPPPPXXXXXPPQXPPXGXXPXXPXGXXPXGE-KKGXLPRGGXXKXKXXEKXPPP 983
GA P P P G P P G P G G PRGG E PP
Sbjct: 96 GASQPAPPEKFPDGIPNGGNQPKFPGGGFPDGPFPNGGGPRGGNQCQCTVENSCPP 151
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = -1
Query: 1132 PXXXXXPP-QXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKXPPPP 980
P PP Q PP P G P G LP + PPPP
Sbjct: 1274 PLLKKKPPLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPP 1325
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 5.9
Identities = 26/105 (24%), Positives = 29/105 (27%)
Frame = +1
Query: 556 PPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPPXKXXKXSXXXXX 735
PPP G PP G P PPP G S PPP + S
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPP---PPKGTGSPPPPPTGEPQDLSGEGNA 154
Query: 736 XXXXXXAXXXXXXXPPXNPPGXPPXXPTPXXXXXTXPXFSPRGXG 870
PP PP P + P P+G G
Sbjct: 155 SRRPPPPPKGTGSPPP--PPTGEPQDLSTEGNASRRPPPPPKGTG 197
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = +1
Query: 556 PPPXGXFXXPPKXGGXPGKXXFAXGXPXXPPP*XGXVXGVFSXXPPPPXKXXKXSXXXXX 735
PPP G PP G P PPP G + PPP + S
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPP---PPKGTGTPPPPPTGEPQDLSAEEGN 91
Query: 736 XXXXXXAXXXXXXXPPXNPPGXP 804
PP P G P
Sbjct: 92 ASRRPPPPPKGTGTPPPPPTGEP 114
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = -1
Query: 1132 PXXXXXPP-QXPPXGXXPXXPXGXXPXGEKKGXLPRGGXXKXKXXEKXPPPP 980
P PP Q PP P G P G LP + PPPP
Sbjct: 1274 PLLKKKPPLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPP 1325
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 713 FXXFXGGGGXXEKTPXTXPF*GGGXXGXPXAKXFFPGXPPXXGGKXXXPXGG 558
F GGGG P P GG G P A + GG P GG
Sbjct: 18 FNLLGGGGGGCCAPPPPPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQPGGG 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,030,820
Number of Sequences: 27780
Number of extensions: 562578
Number of successful extensions: 3523
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2826
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3923317606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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