Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_K21
(1257 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone oxidoredu... 75 7e-13
CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein. 75 7e-13
CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein. 75 7e-13
BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase (ubi... 75 7e-13
BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase (ubi... 75 7e-13
BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase (ubi... 75 7e-13
AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone oxidore... 75 7e-13
CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein. 70 2e-11
BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase (ubi... 70 2e-11
AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone oxidore... 70 2e-11
BC021173-1|AAH21173.1| 83|Homo sapiens chromosome 15 open read... 37 0.18
AF228422-1|AAK00708.1| 83|Homo sapiens normal mucosa of esopha... 37 0.18
AB026707-1|BAB61021.1| 83|Homo sapiens FOAP-11 protein protein. 37 0.18
>U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 186 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 362
+LIPL+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 363 KEESPAPKY 389
K + P +
Sbjct: 73 KLKKERPDF 81
>CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 186 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 362
+LIPL+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 363 KEESPAPKY 389
K + P +
Sbjct: 73 KLKKERPDF 81
>CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 186 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 362
+LIPL+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 363 KEESPAPKY 389
K + P +
Sbjct: 73 KLKKERPDF 81
>BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 186 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 362
+LIPL+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 363 KEESPAPKY 389
K + P +
Sbjct: 73 KLKKERPDF 81
>BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 186 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 362
+LIPL+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 363 KEESPAPKY 389
K + P +
Sbjct: 73 KLKKERPDF 81
>BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 186 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 362
+LIPL+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 363 KEESPAPKY 389
K + P +
Sbjct: 73 KLKKERPDF 81
>AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +3
Query: 186 ALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 362
+LIPL+V +G G GA Y LRLAL NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 363 KEESPAPKY 389
K + P +
Sbjct: 73 KLKKERPDF 81
>CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein.
Length = 87
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 189 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSK 365
+IP+ + +G G A Y LRLALR+PDV W++K NPEPW N QYKF + DY K
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKK 79
Query: 366 EESPAPKY 389
+ P +
Sbjct: 80 LKKDRPDF 87
>BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4-like 2 protein.
Length = 87
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 189 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSK 365
+IP+ + +G G A Y LRLALR+PDV W++K NPEPW N QYKF + DY K
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKK 79
Query: 366 EESPAPKY 389
+ P +
Sbjct: 80 LKKDRPDF 87
>AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit homolog protein.
Length = 87
Score = 69.7 bits (163), Expect = 2e-11
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 189 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSK 365
+IP+ + +G G A Y LRLALR+PDV W++K NPEPW N QYKF + DY K
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKK 79
Query: 366 EESPAPKY 389
+ P +
Sbjct: 80 LKKDRPDF 87
>BC021173-1|AAH21173.1| 83|Homo sapiens chromosome 15 open reading
frame 48 protein.
Length = 83
Score = 36.7 bits (81), Expect = 0.18
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 189 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWE 311
LIPL V + + GGA + + +L DV ++K NPEPWE
Sbjct: 13 LIPLVVFMTVAAGGASSFAV-YSLWKTDVILDRKKNPEPWE 52
>AF228422-1|AAK00708.1| 83|Homo sapiens normal mucosa of esophagus
specific 1 protein.
Length = 83
Score = 36.7 bits (81), Expect = 0.18
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 189 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWE 311
LIPL V + + GGA + + +L DV ++K NPEPWE
Sbjct: 13 LIPLVVFMTVAAGGASSFAV-YSLWKTDVILDRKKNPEPWE 52
>AB026707-1|BAB61021.1| 83|Homo sapiens FOAP-11 protein protein.
Length = 83
Score = 36.7 bits (81), Expect = 0.18
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 189 LIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWE 311
LIPL V + + GGA + + +L DV ++K NPEPWE
Sbjct: 13 LIPLVVFMTVAAGGASSFAV-YSLWKTDVILDRKKNPEPWE 52
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,486,282
Number of Sequences: 237096
Number of extensions: 2695803
Number of successful extensions: 10915
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10900
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17945070980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -