Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K19
         (1323 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.025
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.30 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.70 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    28   0.70 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   3.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.7  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   6.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   8.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 32.7 bits (71), Expect = 0.025
 Identities = 24/88 (27%), Positives = 26/88 (29%), Gaps = 1/88 (1%)
 Frame = +2

Query: 419 PPPPXKXXPPWGX-PPXXXGPXPPPPXXXGGXXXSPPPXGXXXXPXXXGGXPXKXGXXXG 595
           PP P    PP    PP    P  P P   GG    PP       P    G     G   G
Sbjct: 186 PPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPG--AVPGMQPG 243

Query: 596 XKRXXNPKXXXXXXXTPGAPPP*KXPXP 679
            +               G PPP + P P
Sbjct: 244 MQPRPPSAQGMQRPPMMGQPPPIRPPNP 271



 Score = 24.6 bits (51), Expect = 6.5
 Identities = 23/95 (24%), Positives = 30/95 (31%), Gaps = 1/95 (1%)
 Frame = +3

Query: 879  PPXGGGXPPXPPGLXXHPPPPXPKKXXFXSPPXKKXXXP-PXGKKTLXXPGXXXXGGXXG 1055
            PP  GG  P PPG+   P P  P+      P  +    P P   + +  P     G    
Sbjct: 211  PPRPGGMYPQPPGV---PMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRP--PMMGQPPP 265

Query: 1056 XAPKXXXGGGAPKXXGXGKKXXLXFXTPRXXPPPP 1160
              P    GG  P+             +    PP P
Sbjct: 266  IRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRP 300



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 11/37 (29%), Positives = 13/37 (35%)
 Frame = +1

Query: 862 PXGGXPPPXGGGXPXPPRVXXXTPPPLXXKXXXXXPP 972
           P G  P    G  P PP       PP+  +     PP
Sbjct: 233 PPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPP 269



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +2

Query: 452 GXPPXXXGPXPPPPXXXGGXXXSPP 526
           G P    GP  PP    GG    PP
Sbjct: 289 GMPSGMVGPPRPPMPMQGGAPGGPP 313


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.30
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -1

Query: 507 PPXXXGGGGXGPXXXGGXPXGGXXXXGGGG 418
           P    GG G G    GG   GG    GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 27.9 bits (59), Expect = 0.70
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -1

Query: 528 GGGEXXXPPXXXGGGGXGPXXXGGXPXGG 442
           GGG     P   GG   GP   GG   GG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 492 GGGGXGPXXXGGXPXGGXXXXGGGG 418
           G GG  P   GG   G     GGGG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.4 bits (53), Expect = 3.7
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 946 GXGGGGWXXKPGGXGGXPPPXGG 878
           G  GGG     GG  G P P GG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
 Frame = -1

Query: 534 PXGGGEXXXPPXXXGGGGXGPXXXGGXP-----XGGXXXXGGGG 418
           P GGG     P   GGGG G              GG    GGGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255



 Score = 24.6 bits (51), Expect = 6.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -3

Query: 508 PPPXXGGXGGGXXXXGGXPPXGXXFXXGGG 419
           P    GG GGG    GG    G     GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.70
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 1136 PPXXPPPPXKXXXPPXKKKXPPXGG 1210
            PP  PPPP     PP      P GG
Sbjct: 581  PPPAPPPPPPMGPPPSPLAGGPLGG 605



 Score = 26.6 bits (56), Expect = 1.6
 Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
 Frame = +2

Query: 419 PPPPXKXXPPWGXPPXXXGPXPPP--PXXXGGXXXSPPP 529
           P  P    PP   PP   GP P P      GG   S PP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 16/55 (29%), Positives = 16/55 (29%)
 Frame = +3

Query: 900  PPXPPGLXXHPPPPXPKKXXFXSPPXKKXXXPPXGKKTLXXPGXXXXGGXXGXAP 1064
            P   P L    PPP P       PP       P G      P      G  G AP
Sbjct: 570  PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAP 624



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 480 PPXPPXXGGGXXXPPPQ 530
           PP PP  GG     PPQ
Sbjct: 530 PPPPPPPGGAVLNIPPQ 546


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.9 bits (59), Expect = 0.70
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -1

Query: 528 GGGEXXXPPXXXGGGGXGPXXXGGXPXGGXXXXGGG 421
           GGG         G GG G    GG   GG    GGG
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 492 GGGGXGPXXXGGXPXGGXXXXGGGG 418
           GGG  GP   G    G     GGGG
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGGG 563



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 492 GGGGXGPXXXGGXPXGGXXXXGGGG 418
           GGGG G    G     G    GGGG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGG 864


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.2 bits (45), Expect(2) = 3.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 1124 VXSXPPXXPPPP 1159
            + S PP  PPPP
Sbjct: 780  IGSPPPPPPPPP 791



 Score = 21.4 bits (43), Expect(2) = 3.1
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +2

Query: 1136 PPXXPPPPXKXXXP 1177
            PP  PPPP     P
Sbjct: 783  PPPPPPPPPSSLSP 796


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = -1

Query: 528 GGGEXXXPPXXXGGGGXGPXXXGGXPXGGXXXXGGG 421
           GGG         G GG G    GG    G    GGG
Sbjct: 655 GGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGG 690



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 492 GGGGXGPXXXGGXPXGGXXXXGGGG 418
           GGGG G    G    G     GGGG
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGG 681



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 973 GGEXKXXFXGXGGGGWXXKPGGXGG 899
           GGE      G GGGG   + G  GG
Sbjct: 731 GGEVGSVGGGGGGGGSSVRDGNNGG 755


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 862 PXGGXPPPXGGGXPXPPRVXXXTPPPL 942
           P G  PPP  G  P P  V     PP+
Sbjct: 105 PNGPLPPPMMGMRPPPMMVPTMGMPPM 131



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
 Frame = +2

Query: 419 PPPPXKXXPPWGXPPXXXGPXPP-PPXXXGGXXXSPPP 529
           PP P       G PP   GP  P PP   G     PPP
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPLPPPMMG---MRPPP 120


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 891 GGXPPXPPGLXXHPPPPXP 947
           GG    PP +   PPPP P
Sbjct: 742 GGPSSSPPVMESIPPPPKP 760


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.309    0.152    0.530 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,427
Number of Sequences: 2352
Number of extensions: 18666
Number of successful extensions: 91
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152871378
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)