Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_K15
(1225 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 37 0.025
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 34 0.24
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.31
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 33 0.31
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 33 0.41
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 28 0.72
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 31 1.3
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.2
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 31 2.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 2.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 2.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 2.2
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 31 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 2.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 2.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 2.2
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 30 2.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.9
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 3.8
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 30 3.8
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 30 3.8
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 30 3.8
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 3.8
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 3.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.7
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 29 6.7
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 6.7
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 6.7
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 37.1 bits (82), Expect = 0.025
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PPP PPP P
Sbjct: 58 PPPMCPPPPPPPPPPMCPPPPP 79
Score = 33.1 bits (72), Expect = 0.41
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -2
Query: 543 LXPPPXXPPPGPXXFXXFLPXXXPXXXXPXXGLXXXFSPPXXXEPPP 403
+ PPP PPP P LP P P PP PPP
Sbjct: 25 MGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 33.1 bits (72), Expect = 0.41
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PPP PP P
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPP 78
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PP PPP PPP P
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPP 72
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PP PPP PP PPP P
Sbjct: 59 PPMCPPPPPPPPPPMCPPPPPP 80
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP PPP PPP P
Sbjct: 63 PPPPPPPPPPMCPPP--PPPMP 82
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.24
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
P P PPP PPP PPP P
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPP 146
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP PPP PPP P
Sbjct: 134 PPPPPPHYPP--PPPHYPPPPP 153
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PP PPP P
Sbjct: 136 PPPPHYPPPPPHYPP--PPPAP 155
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.5 bits (73), Expect = 0.31
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +2
Query: 407 GGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGGXXXXXXGG 574
GG GG G G G + G GGG GGG RGG GG
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGG 131
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 33.5 bits (73), Expect = 0.31
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP P P PPP P
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPP 87
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
P P PPP PP PPP P
Sbjct: 59 PCPAQFCPPPPICPPPPPPPMP 80
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PP PPP P P PPP P
Sbjct: 68 PPICPPPPPPPMPCPPPPPPMP 89
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 33.1 bits (72), Expect = 0.41
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PPP P
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPP 370
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 28.3 bits (60), Expect(2) = 0.72
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 550 PPPXPPPXXPPP 515
PPP PPP PPP
Sbjct: 316 PPPIPPPIQPPP 327
Score = 22.6 bits (46), Expect(2) = 0.72
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 538 PPPXXPPPXP 509
PPP PPP P
Sbjct: 346 PPPPPPPPHP 355
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXPXXFXXF 491
PP P P PPP PPP P F
Sbjct: 777 PPPFFALPVPPPPPVPPPPPPPFLTCF 803
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP PP PPP P
Sbjct: 777 PPPFFALPVPPPPPVPPPPPPP 798
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 574 PPPXXXXXPPPX-PPPXXPPPXPXXFXXFF 488
P P PPP PPP PPP P F F
Sbjct: 234 PRPTTRRLPPPTTPPPPPPPPAPSPFVDAF 263
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXPXXFXXF 491
PPP PPP PPP P P F F
Sbjct: 242 PPPTT---PPPPPPPPAPSPFVDAFKSF 266
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 574 PPPXXXXXPPPX-PPPXXPPPXPXXFXXFF 488
P P PPP PPP PPP P F F
Sbjct: 232 PRPTTRRLPPPTTPPPPPPPPAPSPFVDAF 261
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXPXXFXXF 491
PPP PPP PPP P P F F
Sbjct: 240 PPPTT---PPPPPPPPAPSPFVDAFKSF 264
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPP 515
PPP PPP PPP PP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPP 308
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PP PPP P
Sbjct: 264 PPPPRTGSPPP-PPTGSPPPPP 284
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = -2
Query: 549 PPLXPPPXXPPP--GPXXFXXFLPXXXPXXXXPXXGLXXXFSPPXXXEPPP 403
PP PP PPP P P P P PP PPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPP 515
PPP PPP PPP PP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPP 329
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PP PPP P
Sbjct: 285 PPPPRTGSPPP-PPTGSPPPPP 305
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = -2
Query: 549 PPLXPPPXXPPP--GPXXFXXFLPXXXPXXXXPXXGLXXXFSPPXXXEPPP 403
PP PP PPP P P P P PP PPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPP 515
PPP PPP PPP PP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPP 314
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PP PPP P
Sbjct: 270 PPPPRTGSPPP-PPTGSPPPPP 290
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Frame = -2
Query: 549 PPLXPPPXXPPP--GPXXFXXFLPXXXPXXXXPXXGLXXXFSPPXXXEPPP 403
PP PP PPP P P P P PP PPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 573 PPXXXXXXPPLXPPPXXPPPGPXXFXXFLPXXXPXXXXPXXGLXXXFSPP 424
PP PP PPP PGP P P P G+ PP
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGGMPPPP 337
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGGXXXXXXGG 574
GGG GG G G G G GGG GGG GG GG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG 154
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGG 550
GGGS GG G G G GGG GGG GG
Sbjct: 172 GGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGG 220
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGGXXXXXXGG 574
GGG GG G G G G GGG GGG GG GG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGG 154
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGG 550
GGGS GG G G G GGG GGG GG
Sbjct: 172 GGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGG 220
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 550 PPPXPPPXXPPPXP 509
PPP PPP PPP P
Sbjct: 136 PPPSPPPPPPPPPP 149
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -2
Query: 573 PPXXXXXXPPLXPPPXXPPPGPXXFXXFLPXXXPXXXXPXXGLXXXFSPP 424
PP PP PPP PGP P P P G+ PP
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP-PGMGGMPPPP 347
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 550 PPPXPPPXXPPPXP 509
PPP PPP PPP P
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PPP P P
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPP---XXPPP 515
PPP PPP PPP PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 550 PPPXPPPXXPPPXP 509
PPP PPP PPP P
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PPP P P
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPP---XXPPP 515
PPP PPP PPP PPP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PPP P P
Sbjct: 785 PPPRASEPPPPPPPPVATAPVP 806
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP P P PPP P
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPKP 98
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP P P PPP P
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPKP 320
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PPP P P
Sbjct: 134 PPPTPAAPPPPPPPPPPAPEAP 155
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP P P PPP P
Sbjct: 483 PPPSPPALPPALPNPNEPPPPP 504
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.9
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = -2
Query: 582 GXXPPXXXXXXPPLXPPPXXPPPGPXXFXXFLPXXXPXXXXP-XXGLXXXFSPPXXXEPP 406
G PP P PPP PPP P P P +PP PP
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
Query: 405 P 403
P
Sbjct: 195 P 195
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = -2
Query: 573 PPXXXXXXPPLXPPPXXPPPG--PXXFXXFLPXXXPXXXXPXXGLXXXFSPPXXXEPPP 403
PP P PP PPPG P P P P G PP PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPP 772
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PP PPP PP PPP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPP 773
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 6/28 (21%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPP------XXPPPXP 509
PPP PPP PPP PPP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = -2
Query: 573 PPXXXXXXPPLXPPPXXPPPG--PXXFXXFLPXXXPXXXXPXXGLXXXFSPPXXXEPPP 403
PP P PP PPPG P P P P G PP PPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPP 772
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PP PPP PP PPP P
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPP 773
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 6/28 (21%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPP------XXPPPXP 509
PPP PPP PPP PPP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPP 515
PPP PPP PPP PPP
Sbjct: 43 PPPMCGCAPPPPPPP--PPP 60
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPP 518
PPP PP PPP PP
Sbjct: 42 PPPPMCGCAPPPPPPPPPP 60
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = -2
Query: 573 PPXXXXXXPPLXPPPXXPPPG--PXXFXXFLPXXXPXXXXPXXGLXXXFSPPXXXEPPP 403
PP P PP PPPG P P P P G PP PPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PP P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPP 355
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PP PPP PP PPP P
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPP 356
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 6/28 (21%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPP------XXPPPXP 509
PPP PPP PPP PPP P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP PPP PP P
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPP 729
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PPP P
Sbjct: 243 PPREKSVPPPPPPP--PPPKP 261
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PPP P
Sbjct: 258 PPREKSVPPPPPPP--PPPKP 276
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 407 GGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGGXXXXXXGG 574
GGS G G G G+ G GGG GGG GG GG
Sbjct: 13 GGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGG 68
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 582 GXXPPXXXXXXPPLXPPPXXPPPGP 508
G P P L PPP PPPGP
Sbjct: 136 GGPPYCECENCPKLPPPPPIPPPGP 160
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PPP P
Sbjct: 243 PPREKSVPPPPPPP--PPPKP 261
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 571 PPXXXXXPPPXPPPXXPPPXP 509
PP PPP PPP PPP P
Sbjct: 258 PPREKSVPPPPPPP--PPPKP 276
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGG 550
GGG GG ++ P G G G G G GGG +GG
Sbjct: 185 GGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGG 233
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGG 550
GGG GG ++ P G G G G G GGG +GG
Sbjct: 223 GGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGG 271
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PP PPP PP P
Sbjct: 1592 PPPRLGMPPPGPPPPNGGPPPP 1613
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGGXXXXXXGG 574
GGG GG+ G G G G GG GGG RGG GG
Sbjct: 158 GGGRGGSGGQ----GGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGG 210
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGGXXXXXXGG 574
GGG GG P G G G GGG GGG GG GG
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG 95
Score = 28.7 bits (61), Expect = 8.8
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 404 GGGSXXXGGEKKKKXPXXGXXXXGXXXGKKXXKXXGPGGGXXGGGXRGG 550
GGG GG P G G G GGG GGG GG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGG 148
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP PP P P P
Sbjct: 244 PPPSPVCMPPPPPPCPMPIPCP 265
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPPXP 509
PPP PPP P PPP P
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPP 118
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 549 PPLXPPPXXPPPGPXXF 499
P + PPP PPPGP F
Sbjct: 228 PVVIPPPPPPPPGPNCF 244
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPP 515
PPP PPP PPP PPP
Sbjct: 184 PPP-----PPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 574 PPPXXXXXPPPXPPPXXPPP 515
PPP PPP PPP PPP
Sbjct: 184 PPP-----PPPIPPPGPPPP 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,703,153
Number of Sequences: 27780
Number of extensions: 165744
Number of successful extensions: 3576
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3380764392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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