Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K14
         (1349 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0195 + 1327071-1327187,1328060-1328203,1328340-1328431,132...    65   1e-10
05_04_0254 - 19444409-19444621,19444724-19444887,19444974-194450...    36   0.073
03_05_1105 + 30438140-30438350,30438448-30438926                       33   0.39 
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    30   3.6  
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468...    30   4.8  

>02_01_0195 +
           1327071-1327187,1328060-1328203,1328340-1328431,
           1329393-1329579,1329676-1329831,1329959-1330012
          Length = 249

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +2

Query: 182 FVCFSAAAMLAERGSWXXXXXXXXXXXXSMS-LMTLVNLFMQSHFLYQAHLYLGLMLMCG 358
           F CF+ AA++A+R  +             +  L    ++F  S   +   +Y GL++  G
Sbjct: 131 FGCFTCAAIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSFMFEVYFGLLIFLG 190

Query: 359 FVLFDTQLIIEKRRMGSKDFVQHALELFIDFIGMFRRLVIIL 484
           ++++DTQ IIE+   G  D+++HAL LF DF+ +  R+++I+
Sbjct: 191 YMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIM 232



 Score = 33.5 bits (73), Expect = 0.39
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 67  IYLRFGLTSGMSMGPLLEYVSVVDPSIIITALLGTTXGICMLLCCCYAC*TRQ 225
           I L   L  G S+GPL++     D SI++TA +GT        C       R+
Sbjct: 93  ILLAAALLEGASVGPLIKLAVDFDSSILVTAFVGTAIAFGCFTCAAIVAKRRE 145


>05_04_0254 -
           19444409-19444621,19444724-19444887,19444974-19445087,
           19446086-19446395
          Length = 266

 Score = 35.9 bits (79), Expect = 0.073
 Identities = 14/57 (24%), Positives = 35/57 (61%)
 Frame = +2

Query: 335 LGLMLMCGFVLFDTQLIIEKRRMGSKDFVQHALELFIDFIGMFRRLVIILTQKEEQN 505
           LG ++  GF+++DT+ +I  +R    D++  ++EL++D + +F  ++ ++   +  N
Sbjct: 212 LGALVFSGFIIYDTENLI--KRHTYDDYIWASVELYLDILNLFLYILNMIRSMQSDN 266


>03_05_1105 + 30438140-30438350,30438448-30438926
          Length = 229

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = +2

Query: 335 LGLMLMCGFVLFDTQLIIEKRRMGSKDFVQHALELFIDFIGMFRRLVII 481
           L  ++ CG++++DT  +I  +R    ++V  A+ L++D I +F  L+ +
Sbjct: 177 LAALVFCGYIVYDTDNLI--KRYSYDEYVWAAVALYLDVINLFLSLLTL 223


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/62 (27%), Positives = 18/62 (29%)
 Frame = -2

Query: 1135 PXFXGXPXXPLXXXXXXXPXPXXPGXXXXXXXXRXXPXXPXPPXPXGWPIXXXXKNLPPP 956
            P   G P  P        P P  P            P  P PP P   P     +  PPP
Sbjct: 1141 PLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPP 1200

Query: 955  XP 950
             P
Sbjct: 1201 LP 1202


>08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,
            4683834-4684204,4684290-4684835,4684927-4685027,
            4685117-4685933,4686025-4686213,4686313-4686384,
            4686477-4686587,4686647-4686652,4686694-4686794,
            4687714-4687813,4687891-4687986,4688157-4688273,
            4688367-4688492,4688566-4688619,4688745-4688992,
            4689087-4689195,4689284-4689583,4689799-4689963
          Length = 2240

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 1027 PXXPXPPXPXGWPIXXXXKNLPPPXPXP 944
            P  P PP P   P      N+PPP P P
Sbjct: 428  PPLPPPPPPPPPPPPPLPPNMPPPLPPP 455


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,260,705
Number of Sequences: 37544
Number of extensions: 455697
Number of successful extensions: 1059
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4248472980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)