Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_K11
(1222 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyce... 47 5e-06
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 38 0.003
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 36 0.015
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 35 0.020
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 33 0.061
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 33 0.080
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 33 0.080
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 31 0.25
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 31 0.32
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 30 0.57
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 29 0.99
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 1.3
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 29 1.7
SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyce... 28 2.3
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 28 2.3
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 28 3.0
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 28 3.0
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 28 3.0
SPAC977.15 |||dienelactone hydrolase family|Schizosaccharomyces ... 27 4.0
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 27 4.0
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 4.0
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 27 5.3
SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting... 27 7.0
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 7.0
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 27 7.0
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 27 7.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 7.0
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 9.2
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 26 9.2
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 26 9.2
>SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 47.2 bits (107), Expect = 5e-06
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Frame = +1
Query: 574 NDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVTDLVF-------VPGEGGRVLAVC--- 723
++L++WR F KN+ +D L LR VW+T +VF + G+ ++C
Sbjct: 166 DELELWRTENVVKVFQGKNVKNDSLNLRVRVWITGIVFTEDIINVIDGKSEDDESLCFHF 225
Query: 724 ---SRHGYVRLYDTRSQRRPVQNVTFDLAAT 807
+ +G +R YDT+ RRPV TFD++ +
Sbjct: 226 ATITHYGQLRFYDTKHGRRPVS--TFDVSTS 254
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 316 ILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTLVSAVSSGTVRVWGDDANE 495
+L G + I+++ +L+ N C++T G V L ++ L S GT++ W + +
Sbjct: 407 VLSGSDDSTIKIW-SLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKK 465
Query: 496 DIFT-GGKLDRM-RVCSDDTLFATGGEENDLKVWRVGE 603
+ T G ++ + + +D +G + +KVW E
Sbjct: 466 CVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEACE 503
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 35.5 bits (78), Expect = 0.015
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Frame = +1
Query: 307 QTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLG---KVNNTLVSAVSSGTVRVW 477
Q +L + I+ ++ KC+ T + +V+ L K NT S+ GTV+VW
Sbjct: 110 QPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVW 169
Query: 478 GDDANEDIFTGGKLDR------MRVCSDDTLFATGGEENDLKVW 591
++ FT DR D T G++N +KVW
Sbjct: 170 SFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVW 213
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 35.1 bits (77), Expect = 0.020
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Frame = +1
Query: 277 ITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTLVSAVS 456
+T + W + T + +G N ++++ K + + E V L ++ L S
Sbjct: 294 VTSLRWVQRG-THLAVGTHNGSVEIWDAATCKKTRTMSGHTE-RVGALSWNDHVLSSGGR 351
Query: 457 SGTVRVWGDDANEDIFTGGKLDRMRVC-----SDDTLFATGGEENDLKVWRVGESQPTFS 621
+ A E F R VC S++ L A+GG +N L VW E +P +S
Sbjct: 352 DNHILHRDVRAPEHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLYS 411
Query: 622 AKN 630
N
Sbjct: 412 FHN 414
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 33.5 bits (73), Expect = 0.061
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Frame = +1
Query: 313 EILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNT--LVSAVSSGTVRVWGDD 486
++++ N +++++ + CI T + G+V+ +NN +VSA SG + V+ D
Sbjct: 409 DVILSGANGSLKLWNK-KTTSCIRTIEC--GYVLAASFINNDKCIVSAYKSGELEVY-DI 464
Query: 487 ANEDIFT-----GGKLDRMRVCSDDTLFATGGEENDLKVWRVGES---QPTFSAKNLAHD 642
A+ + G + + V D T FAT ++ +K+W + S P + K
Sbjct: 465 ASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKSSFDFVPGTTRKVTTLK 524
Query: 643 WLQLRQPVWVTDLVFVP-GEGGRVLAVCSRHGYVRLY 750
Q RQ + D++ V GR +A V++Y
Sbjct: 525 LEQTRQIDFTDDVLAVKISPDGRFVAASLLDNTVKVY 561
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.1 bits (72), Expect = 0.080
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +1
Query: 298 NKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNN--TLVSAVSSGTVR 471
N ++ G ++ I++++ + +C+ T + G ++ L ++ +VSA + G V+
Sbjct: 516 NPFSRQLASGSGDRTIRIWN-VDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVK 574
Query: 472 VWGDDANEDIFT-GGKLDRMRVCS---DDTLFATGGEENDLKVWR 594
VW + E + T DR+ + D +L +GG + + VW+
Sbjct: 575 VWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWK 619
Score = 29.5 bits (63), Expect = 0.99
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +1
Query: 526 MRVCSDDTLFATGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGG 705
M + +TL ATGG E +KVW + + T S + H + ++ L F +
Sbjct: 109 MTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFR--GHGGV-------ISALCFGKHQNT 159
Query: 706 RVLAVCSRHGYVRLYDTRSQR 768
VLA + VRL+D S R
Sbjct: 160 WVLASGADDSRVRLWDLNSSR 180
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 33.1 bits (72), Expect = 0.080
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 439 LVSAVSSGTVRVWGDDANEDIFT----GGKLDRMRVCSDDTLFATGGEENDLKVW-RVGE 603
L+SA S G V++W N + T L + V S ++ATG +K+W +G+
Sbjct: 1194 LISASSDGEVKLWDIRMNHSLQTFSTDNSGLTSLTVHSHAPVYATGSSNQSIKIWDTLGQ 1253
Query: 604 SQPTF 618
+ TF
Sbjct: 1254 NINTF 1258
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 31.5 bits (68), Expect = 0.25
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 550 LFATGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVLAVCSR 729
+ ATGG++ KVW + +F +NL Q VT+L F P G LAV +
Sbjct: 314 ILATGGQDTTAKVWDIRALGKSF--RNLG------SQMSAVTNLCFSP--LGESLAVTEQ 363
Query: 730 HGYVRLYDTR 759
+V+L+DT+
Sbjct: 364 ADFVQLFDTK 373
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 31.1 bits (67), Expect = 0.32
Identities = 21/95 (22%), Positives = 40/95 (42%)
Frame = +1
Query: 544 DTLFATGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVLAVC 723
D + A+GG+++ + +W+V E H +L+ LV VLA
Sbjct: 94 DQVLASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGLVQYHPTAANVLASS 153
Query: 724 SRHGYVRLYDTRSQRRPVQNVTFDLAATCIAPSIS 828
S ++L+D + V +V+ + C + S +
Sbjct: 154 SADNTIKLWDC---EKGVAHVSLKMDVMCQSMSFN 185
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 30.3 bits (65), Expect = 0.57
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 304 EQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTLVSAVSSGTVRVW 477
+ +I++ + +I +Y T G I + + EG V V +TLV+ + TVRVW
Sbjct: 415 DDDKIIVSTCSPRINIYDTKTG-VLIRSLEEHEGDVWTFEYVGDTLVTGSTDRTVRVW 471
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 29.5 bits (63), Expect = 0.99
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 304 EQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTLVSAVSSGTVRVW 477
E+ + G ++ I+V+ G C Y + + V L N L+S + T+R+W
Sbjct: 558 ERNICISGSMDKSIRVWDLSTGT-CKYVLEGHDAFVTLLNVFQNRLISGSADSTIRIW 614
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.1 bits (62), Expect = 1.3
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +1
Query: 430 NNTLVSAVSSGTVRVWGDDANEDIFTGGKLDRMRVCS----DDTLFATGGEENDLKVWRV 597
NN L+S+ T R+W + + D + + DD F +G + L++W +
Sbjct: 320 NNFLLSSSMDKTARLWHPVRKDCLCCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSI 379
Query: 598 GESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVLAVCSRHGYVRLYDTRSQR 768
E +F W +L P +T + F P +GG +A + G YDTR R
Sbjct: 380 KEKAVSF--------WNEL--PELITAVAFSP-DGGLAIA-GTFVGLCLFYDTRGLR 424
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 28.7 bits (61), Expect = 1.7
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 4/114 (3%)
Frame = +1
Query: 430 NNTLVSAVSSGTVRVWGDDANEDIFTGGKLDRMRVC----SDDTLFATGGEENDLKVWRV 597
++ LV+ T R+W D I T C D ++ ATG +N ++ W
Sbjct: 147 SSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDP 206
Query: 598 GESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVLAVCSRHGYVRLYDTR 759
+ P A L + W L P G +LA S+ VR+++ +
Sbjct: 207 KKGSPIGDA--LRRHTKPIMALCW-QPLHLAPDSGPYLLASGSKDNTVRIWNVK 257
>SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -3
Query: 647 SQSWAKFLAENVG--WDSPTRQTFKSFSSPPVANNVSSLQTLILSSFPPVKISSFASSPH 474
S SW+K+L NV WD TR+ F + + P A+ + + SS P ++++S++ +
Sbjct: 259 SSSWSKYLTSNVAKVWD--TRKEFAT-AKIPEASFYGKI--IFSSSGPHIQVASYSGHYY 313
Query: 473 TLTVPL 456
V L
Sbjct: 314 RFAVNL 319
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 235 ENLVDVKSL--QKGEGITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGH 408
+N+VD+++L Q C++ N E +I++G + I + ++ + DY E
Sbjct: 382 DNMVDIETLKTQLPPLSQCIQIPNYEHLDIIMGDTKKDIVIQQVVEQLNHVIAGDYFESI 441
Query: 409 VVGLGKVNNTLVSAVSSGTV 468
G ++ LV V + T+
Sbjct: 442 KEEFG-LDTELVDGVMNHTI 460
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 27.9 bits (59), Expect = 3.0
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 544 DTLFATGGEENDLKVWRVGESQPTFSAKN-LAHDWLQLRQPVWVTDLVFVPGEGGRVLAV 720
+++F N +++W++ E++ F ++ L HDW + Q W + G + V
Sbjct: 237 ESVFMRTSGRNQIQLWKL-ENKTNFKSEFILYHDWGSVLQLEWCPTISVEDSILGFLAVV 295
Query: 721 CSRHGYVRLYDTRSQRRPVQ 780
CS G +R+ R R PV+
Sbjct: 296 CS-DGKLRV--LRVPRSPVK 312
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 27.9 bits (59), Expect = 3.0
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 538 SDDTLFATGGEENDLKVWRVGESQPTFSAKNLAHDWL 648
SDD LF+TGG E +L V+R+ + +P K + H+ L
Sbjct: 707 SDDILFSTGGLE-ELNVYRLIQ-KPEAYLKRIVHEKL 741
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 277 ITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNK-CIYTADYAEGHVVGLGKVNNTLVSAV 453
+ C++W +E T IL N + +Y+ + + ++ A + L +
Sbjct: 435 VNCIDWNLREGTPILAVASNSIVSMYNAISLQQLAVFMRHTAPVSALSFSHNGRYLATGD 494
Query: 454 SSGTVRVW 477
+SG V +W
Sbjct: 495 TSGGVCIW 502
>SPAC977.15 |||dienelactone hydrolase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 1054 TTERNPLRXKTKESYSXPLHWP 1119
T E+ R K E S PLHWP
Sbjct: 91 TIEQKEARSKFMEKISSPLHWP 112
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 27.5 bits (58), Expect = 4.0
Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Frame = +1
Query: 313 EILIGKKNQQIQVYHTLQGNKCIYTADY-AEGHVVGLGKVNNTLVSAVSSGTVRVWGDDA 489
E LI +++ I +Y +++ +CI ++ + L K + ++ + T +W +
Sbjct: 356 EQLINAEDKHIAIY-SVETRECIKKISLQSKVTSICLSKDSKYALTNLEPHTTFLWDLEE 414
Query: 490 NEDI--FTGGKLDRMRVCS-----DDTLFATGGEENDLKVW 591
N + + G KL + S DDT +G E++ +++W
Sbjct: 415 NRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIW 455
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 538 SDDTLFATGGEENDLKVWRVGESQPTFSAKN 630
SD A+GG +N +++W S P F+ N
Sbjct: 314 SDGLQLASGGNDNVVQIWDARSSIPKFTKTN 344
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 27.1 bits (57), Expect = 5.3
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 13/81 (16%)
Frame = +1
Query: 409 VVGLGKVNNTLVSAVSSGTVRVWGDD--ANEDIFTG-----GKLDRMRVC------SDDT 549
+V N S G V+VW D + +F G LD +C S+
Sbjct: 177 IVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQL 236
Query: 550 LFATGGEENDLKVWRVGESQP 612
ATG +N + +W+ +S P
Sbjct: 237 TLATGAADNTVCLWKASQSTP 257
>SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting
complex subunit Apc4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 719
Score = 26.6 bits (56), Expect = 7.0
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 712 LAVCSRHGYVRLYDTRSQRRPVQNVTF-DLAATCIAPSISTRLALVGFARGQLRQVELRR 888
+ CS H L RS + + +V F DL AT + + L +VGF G+L+ ++
Sbjct: 44 ILTCSNH----LICCRSNSQRIWDVDFHDLEATELCWNHDGNLIVVGFKNGELKIIDSST 99
Query: 889 G 891
G
Sbjct: 100 G 100
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 691 PGEGGRVLAVCSRHGYVRLYDTRSQ 765
PG G R+LAV +G V + +TR++
Sbjct: 394 PGRGARLLAVGDENGLVYVVNTRTE 418
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 7.0
Identities = 38/172 (22%), Positives = 63/172 (36%), Gaps = 7/172 (4%)
Frame = +1
Query: 400 EGHVVGLGKVNNTLVSAVSSGTVRVW--GDDAN---EDIFTGGKLD--RMRVCSDDTLFA 558
+ + L V L SA ++ W GD + E+I T KL + D+ +
Sbjct: 16 QADIYSLNVVAGNLWSASGDSKIKKWSIGDAEHSLVEEIDTPHKLGVHHLATSLDENVVV 75
Query: 559 TGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVLAVCSRHGY 738
+ G D+ VW ++ N H W + + G+ +A S G
Sbjct: 76 SCGFGQDVYVWNPETNEFRDLGNNAQHP-----SECWSSCI----SPDGQTIAFTSVDGR 126
Query: 739 VRLYDTRSQRRPVQNVTFDLAATCIAPSISTRLALVGFARGQLRQVELRRGR 894
+ ++D S + + T CI S + R + G GQL + GR
Sbjct: 127 IAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGR 178
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 560 VANNVSSLQTLILSSFPPVKISSFASSPHTLTVPLDTADTNVLFTFPRPT 411
++ N +L+ S+ ++SSP TLT P AD + +FP PT
Sbjct: 321 ISKNYETLKEKYASAANYTGDGDYSSSPATLTCP---ADDSYFTSFPLPT 367
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 7.0
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 599 PTRQTFKSFSSPPVANNVSSLQTLILSSFPPVKISSFASSPHTLTV-PLDTADTNVLFTF 423
PT + +S P+ +S T +S PP SS S+P T TV P T+ T++
Sbjct: 152 PTSTSSTDTNSNPLPTTSTSCTTS--TSIPPTGGSSSLSTPITPTVPPTSTSSTSI---- 205
Query: 422 PRPTTCPSA 396
P P T S+
Sbjct: 206 PIPPTSTSS 214
Score = 26.2 bits (55), Expect = 9.2
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 572 SSPPVANNVSSLQTLILSSFPPVKISSFASSPHTLTV-PLDTADTNVLFTFPRPTTCPSA 396
SS P+ + +S T +S PP SS S+P T TV P T+ T++ P P T S+
Sbjct: 104 SSSPLPSTSTSCTTS--TSIPPTGGSSSLSTPITPTVPPTSTSSTSI----PIPPTSTSS 157
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 688 VPGEGGRVLAVCSRHGYVRLYDTR 759
VP + G VCS G R YD R
Sbjct: 150 VPCDNGHTFLVCSEDGTARQYDIR 173
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 9.2
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Frame = +1
Query: 277 ITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTLVSAVS 456
+T + W K T++ +G + I ++ ++ K + + V L +NTL S
Sbjct: 169 VTSVLWTGKG-TQLAVGTDSGVIYIWD-IESTKSVRSLKGHSERVAALAWNDNTLTSGGK 226
Query: 457 SGTVRVWGDDANEDIFTGGKLDRMRVCS---DDTL--FATGGEENDLKVWRVGESQP 612
+ A K+ +C D +L A+GG +N+L VW S+P
Sbjct: 227 DEVILHHDLRAPGCCAEMMKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRSSRP 283
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 26.2 bits (55), Expect = 9.2
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +1
Query: 343 IQVYHTLQGNKCI-YTADYAEGHVVGLGKVNNTLVSAVSSGTVRVWGDDANEDIFTGGKL 519
+Q+ HTL+ I Y A+G + G +V V +G + + + +
Sbjct: 278 VQLLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYV 337
Query: 520 DRMRVCSDDTLFATGGEENDLKVWRVGESQ 609
+ D ATG E+ +++W + + +
Sbjct: 338 RSVAFSPDGKYLATGVEDQQIRIWDIAQKR 367
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,205,232
Number of Sequences: 5004
Number of extensions: 80383
Number of successful extensions: 280
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 661404424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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