Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_K11
(1222 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0533 - 19178296-19178516,19178790-19178847,19179315-191793... 63 5e-10
03_05_0373 + 23581812-23583293 44 3e-04
03_05_1069 + 30118930-30120120 37 0.037
12_02_0971 + 24949137-24950534 36 0.065
10_01_0088 + 1087807-1088282,1088752-1088974 36 0.085
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 33 0.46
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 33 0.60
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 31 1.8
03_05_0378 - 23619169-23619225,23619389-23619454,23620052-236202... 31 1.8
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 31 1.8
06_01_0635 + 4623223-4623380,4623529-4623724,4624379-4624894,462... 31 2.4
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 30 3.2
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701... 29 5.6
06_01_1073 - 8762470-8762535,8762743-8762814,8762902-8763009,876... 29 7.4
03_06_0741 + 35893538-35895600,35896274-35896474,35896701-358968... 29 7.4
03_05_0301 + 22928864-22929787 29 7.4
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 29 9.8
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 29 9.8
>07_03_0533 -
19178296-19178516,19178790-19178847,19179315-19179370,
19179527-19179646,19180446-19180599,19180911-19181018,
19181134-19181197,19181342-19181518,19181679-19181824,
19181912-19181941,19181999-19182150,19182266-19182347
Length = 455
Score = 62.9 bits (146), Expect = 5e-10
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Frame = +1
Query: 421 GKVNNTLVSAVSSGTVRVWGDDANEDIFTGGKLDRMRVCSDDTLFATGGEENDLKVWRVG 600
GK V+ ++ + G ++ D+ G + V + ++ GG+ ++ +W +
Sbjct: 148 GKAYVKSVAKENASSDMAVGPSSSWDVSNSGTVQFSSVDAGESYAMFGGKGIEVNLWDIT 207
Query: 601 ESQPTFSAKNLAHDWLQLRQPVWVTDLVFVPGEGGRVLAVCSRHGYVRLYDTRSQRRPVQ 780
+SAK+ + LQ+ W T F+ + R + C+ + VRLYDT SQRRPV
Sbjct: 208 SCSKIWSAKSPRGNSLQIFTAPWFTAGTFLCKDDHRKIVACTNNHQVRLYDTASQRRPVI 267
Query: 781 NVTF-DLAATCIAPSISTRLALVGFARGQLRQVELR 885
+V F + +A + +G RG L ++R
Sbjct: 268 SVDFRESPIKAVAEDPNGHAVYIGTGRGDLASFDMR 303
>03_05_0373 + 23581812-23583293
Length = 493
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 400 EGHVVGLGKVNNTLVSAVSSGTVRVWGDDANEDIF-TGGKLDRMRVCSDDTLFATGGEEN 576
+GHV L + L + S VRVW D F TG L + V +DD TG ++
Sbjct: 107 DGHVYSLAAAGDVLYTGTDSENVRVWRDRRELAGFRTGSGLVKAIVVADDGRIFTGHQDG 166
Query: 577 DLKVWRVGESQP 612
++VWR P
Sbjct: 167 KVRVWRADAGDP 178
Score = 29.1 bits (62), Expect = 7.4
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Frame = +1
Query: 316 ILIGKKNQQIQVYHTLQGNKCIYTADYAEGH-VVGLGKVNNTLVSAVSSGTVRVW----G 480
+ +G + + +H + G A A G V+ L N +VS + T+ W G
Sbjct: 333 VYVGSSDGDVTYWHWIDGEARYGGALRAHGTAVMCLAVAGNVVVSGSADRTLCAWRRGGG 392
Query: 481 DDANEDIFTG--GKLDRMRV-------CSDDT----LFATGGEENDLKVWRVGESQPTFS 621
+ + + G G + + V CS D + +G + +KVWR+ + +PT
Sbjct: 393 EHSRLAVLAGHTGPVKCVAVDEEETSSCSSDGERRFVVYSGSLDGSVKVWRISDIEPTNP 452
Query: 622 AKNL--AHDWLQLRQPVWVT 675
L H W + QP T
Sbjct: 453 PPRLPSPHVWKREDQPAAAT 472
>03_05_1069 + 30118930-30120120
Length = 396
Score = 36.7 bits (81), Expect = 0.037
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 400 EGHVVGLGKVNNTLVSAVSSGTVRVWGDDANEDIF-TGGKLDRMRVCSDDTLFATGGEEN 576
EGH+ L +TL + S +RVW + F + L + V S + +F TG ++
Sbjct: 24 EGHIYSLAAKTDTLYTGSDSKNIRVWRKQKDSGGFKSSSGLVKAIVISGERIF-TGHQDG 82
Query: 577 DLKVWRV 597
++VW+V
Sbjct: 83 KIRVWKV 89
>12_02_0971 + 24949137-24950534
Length = 465
Score = 35.9 bits (79), Expect = 0.065
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +1
Query: 400 EGHVVGLGKVNNTLVSAVSSGTVRVWGDDANEDIF-TGGKLDRMRVCSDDTLFATGGEEN 576
+GHV L L + S VRVW F +G L + V + D TG ++
Sbjct: 93 DGHVYSLAAAGELLYTGTDSKNVRVWRHRREFAGFRSGSGLVKAIVVAGDGRIYTGHQDG 152
Query: 577 DLKVWRVGESQP 612
++VWR P
Sbjct: 153 KVRVWRASADDP 164
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 559 TGGEENDLKVWRVGESQPTFSAKNLAHDWLQLRQPV 666
+G + +KVWRV + +A+ AH W P+
Sbjct: 412 SGSLDGSVKVWRVSSTPDAAAARTPAHGWKATPSPL 447
>10_01_0088 + 1087807-1088282,1088752-1088974
Length = 232
Score = 35.5 bits (78), Expect = 0.085
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +2
Query: 644 GFNYASRSG*PTWCSSPGRGAGCWPXXXXXXXXXXXXXXXKGGRSRT*PSIWR---PLAS 814
G Y G CS GR GCW + +R P++WR P+
Sbjct: 93 GARYGRGGGWRRGCSGGGRWRGCWRGRRGCRRGSGGGGAWRIVEAR--PAVWRPVQPVEM 150
Query: 815 RPASARVWRWWGSPGDSSGRWN 880
RPA+ R R W P + GR++
Sbjct: 151 RPAAWRGGRRWRKPCRAFGRFD 172
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 33.1 bits (72), Expect = 0.46
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +1
Query: 274 GITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNN--TLVS 447
GI +E+ EQ ++ ++ ++++ G+ C+ T + V+ +++ VS
Sbjct: 551 GIWSVEFSPVEQC-VITSSGDRTVKIWAVADGS-CLKTFEGHTSSVLRASFLSHGTQFVS 608
Query: 448 AVSSGTVRVWGDDANEDIFT----GGKLDRMRVCSDDTLFATGGEENDLKVW 591
S G V++W NE I T GK+ + V + ATGG + L +W
Sbjct: 609 CGSDGLVKLWTIKTNECIATFDKHDGKVWALAVGKKTEMLATGGTDAVLNLW 660
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 32.7 bits (71), Expect = 0.60
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 511 GKLDRMRVCSDDTLFATGGEENDLKVWRVGESQ 609
G + M+ SD ATGGE+ ++VWRV E +
Sbjct: 272 GAIVTMKFSSDGQYLATGGEDGVVRVWRVVEGE 304
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/112 (17%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = +1
Query: 277 ITCMEWGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEG-HVVGLGKVNNTLVSAV 453
+ C++ G K ++ G + ++ ++ + N + + + V + +
Sbjct: 41 VNCLKIGRKTSRVLVTGGDDHKVNLWAIGKPNSILSLSGHTSAVESVNFDSTEVFVAAGA 100
Query: 454 SSGTVRVWGDDANEDI--FTGGKLDRMRVCSDD--TLFATGGEENDLKVWRV 597
+SGT+++W + + + TG + + M V FA+G + +LK+W +
Sbjct: 101 ASGTIKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFASGSLDTNLKIWDI 152
>03_05_0378 -
23619169-23619225,23619389-23619454,23620052-23620224,
23620454-23620664,23621056-23621280,23622157-23622493,
23624200-23624627
Length = 498
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Frame = +1
Query: 277 ITCMEWGNKEQTEILIGKKNQQIQVYHTLQGN--KCIYTADYAEGHVVGLGKVNNTLVSA 450
I+C+ +G + +E+ G +++I ++ C++ + L K + L++
Sbjct: 264 ISCLSFG-PDSSELFSGSFDRKIMQWNAEDRTYMNCLFGHQNEVLTMDALSK--DRLLTV 320
Query: 451 VSSGTVRVWG-DDANEDIFTGGKLDRMRVCS--DDTLFATGGEENDLKVWRVGESQPTFS 621
T+ +W + ++ +F + C DD F TG ++ +++W + +PT
Sbjct: 321 ARDRTMHLWKIPEESQLLFRAPATASLECCCFIDDKEFLTGSDDGSVELWSIMRKKPTHI 380
Query: 622 AKNLAH 639
+N AH
Sbjct: 381 IRN-AH 385
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 292 WGNKEQTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHV--VGLGKVN-NTLVSAVSSG 462
+G EQ I G ++ QI ++H G+ I T G V V N + L SA
Sbjct: 452 FGGSEQAFIASGSEDSQIYIWHRATGD-LIETLPGHTGTVNCVSWNPANPHMLASASDDH 510
Query: 463 TVRVWG 480
T+R+WG
Sbjct: 511 TIRIWG 516
>06_01_0635 +
4623223-4623380,4623529-4623724,4624379-4624894,
4626212-4626276,4626387-4626453
Length = 333
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -2
Query: 834 TRADAGRDASGRQIEGHVLDRPPLRASVVQSHVAVSRAHGQHPAPLPGDEHQV-GHPDRL 658
T + G D +GR++ G + PP S+ Q+ +A ++ ++ A LP ++ G+ D +
Sbjct: 129 TGSGQGFDGTGRRLGGFTVHPPP--PSLRQATLAAAQKRARNGALLPSGPRKLGGNNDIM 186
Query: 657 A*LKPIVGQVLGRKR 613
+ L PI + +R
Sbjct: 187 SALSPIQAAAMAAER 201
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 511 GKLDRMRVCSDDTLFATGGEENDLKVWRVGESQ 609
G + M+ D L ATGGE+ ++VW V +S+
Sbjct: 214 GAILTMKFSPDGQLLATGGEDGVVRVWAVMQSE 246
>03_02_0270 -
7011363-7012302,7013237-7013640,7014264-7014333,
7014835-7015331,7015959-7016283,7018060-7018292
Length = 822
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -1
Query: 439 MYCSLSPDLRHVL-LHSRLYKYTCF-LVKCGKLESVGFSFQSKFQF-VLCYPIPCRLYL 272
M+C L+ H+L HSR Y L G + SF + +CYP C LYL
Sbjct: 218 MFCLLASSTCHLLSCHSRRLAYIMLRLDYAGIAALIATSFYPPVYYSFMCYPFFCNLYL 276
>06_01_1073 -
8762470-8762535,8762743-8762814,8762902-8763009,
8763089-8763313
Length = 156
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 523 RMRVCSDDTLFATGGEE--NDLKV-WRVGESQPTF 618
R+R SDDT + G+E DLK W E +PTF
Sbjct: 51 RVRAASDDTSTSASGDELVADLKAKWEAIEDKPTF 85
>03_06_0741 + 35893538-35895600,35896274-35896474,35896701-35896814,
35897570-35897649,35897772-35897896,35898008-35898079
Length = 884
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 307 QTEILIGKKNQQIQVYHTLQGNKCIYTADYAEGHVVGLGKVNNTLVSAVSSGTVRVWGDD 486
+ E L+ ++ + + +T+ G+ C+Y E + L +V + A++S V G
Sbjct: 783 KNEELLVASHKSVSIVYTMIGDVCLYIVGKDEYDELALAEV----IFAITSAVKDVCGKP 838
Query: 487 ANEDIFTGGKLDRMRVCSDDTLF 555
E +F K R+ +C D+ ++
Sbjct: 839 PTERLFL-DKYGRICLCLDEIVW 860
>03_05_0301 + 22928864-22929787
Length = 307
Score = 29.1 bits (62), Expect = 7.4
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
Frame = -2
Query: 876 HLPELSPGEPHQRQTRADAGRDASGRQIEGHVLDRPPLRASVVQSHVAVSRAHGQHPAPL 697
H L P + H +Q +A G +G G+ VVQ +A + HP P
Sbjct: 126 HTHYLPPADYHHQQLQAQGGGGGAGMGAAGYA-------HQVVQHQMAGLQVQNPHPHPH 178
Query: 696 PGDEH---QVGHPDRLA*LKPIVGQVLGRKRWLGLADA 592
P H Q+ + +A ++ Q + R R G A+A
Sbjct: 179 PHHHHHHQQMVNAQHMALVEVARDQDMLRARQAGHANA 216
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 247 DVKSLQKGEGITCMEWGNKEQTEI 318
D ++ KGE +T M+WGN EI
Sbjct: 566 DASAISKGEEVTLMDWGNAIIKEI 589
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 843 QRQTRADAGRDASGRQIEGHVLDRPPLRASVVQSHVAVSRAHGQHPAPLPGDEH 682
Q +AG AS +EG + + + V H V+ PAPLPG+ H
Sbjct: 3162 QPDIETEAGVTASLTVLEGSIAEE--VDTQVESGHDLVTSTAPLSPAPLPGESH 3213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,576,680
Number of Sequences: 37544
Number of extensions: 606262
Number of successful extensions: 1797
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1793
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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