Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K11
         (1222 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    25   1.0  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    25   1.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   3.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   9.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   9.4  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 442 PMYCSLSPDLRHVLLHSRLYKYTCFLV 362
           P +C +SP L  +   +RL K   F+V
Sbjct: 56  PFFCDMSPSLSLLCADTRLNKLAVFIV 82


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 442 PMYCSLSPDLRHVLLHSRLYKYTCFLV 362
           P +C +SP L  V   +RL K   F+V
Sbjct: 55  PFFCDMSPLLSLVCADTRLNKLAVFIV 81


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 557  ANNVSSLQTLILSSFPPVKISS 492
            A+NV+++ T + +  PPVK+ S
Sbjct: 953  ASNVTNVTTNLTTILPPVKVQS 974


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 463 CHLTRPIPMYCSLSPDLRHVLLHSR 389
           C +TR IP  CS +  L  +LL  R
Sbjct: 232 CTITRVIPQVCSGNCKLNDILLTVR 256


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 463 CHLTRPIPMYCSLSPDLRHVLLHSR 389
           C +TR IP  CS +  L  +LL  R
Sbjct: 232 CTITRVIPQVCSGNCKLNDILLTVR 256


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 664 VWVTDLVFVPGEGGRVLAVCSRHGYVRLY 750
           +W  D  F  G+   +  + S + +VRLY
Sbjct: 85  IWKPDTYFYNGKHSYLHTITSPNKFVRLY 113


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = +1

Query: 676 DLVFVPGEGGRVLAVCSRHGYVRLYDTRSQRRPVQNVTFDLAATCIAPSISTRLA 840
           D++ VP E  +    C    Y  ++   + RR     T +L   C++ S  + LA
Sbjct: 202 DILGVPAERHKKYYPCCDEPYPDIFFNITLRRKTLFYTVNLIVPCVSISYLSVLA 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,944
Number of Sequences: 438
Number of extensions: 5833
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41541798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)