Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K09
         (1324 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0319 - 27872601-27874457                                         31   2.0  
11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450,294...    29   6.2  
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258     29   6.2  
02_02_0280 - 8515894-8517309                                           29   6.2  
09_04_0362 - 16953108-16953155,16953478-16953562,16953626-169537...    29   8.2  
06_03_1157 - 28074675-28074710,28075318-28075514,28075676-280758...    29   8.2  

>02_05_0319 - 27872601-27874457
          Length = 618

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = +3

Query: 147 SSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPKTNVH 326
           +S+ A   P   LPT A+   + L R  TN+ SS +  S  S+   +A +  Q+      
Sbjct: 204 NSVTAASSPSLPLPT-AVNSTALLARSPTNSSSSTASSSASSSPPISAASSRQLLSEAAA 262

Query: 327 SGGDGCLLLERTTLSGIPL 383
           +  DG      + LS + L
Sbjct: 263 AVADGNHTAAASLLSALKL 281


>11_01_0389 -
           2937242-2939476,2939556-2939666,2941254-2941450,
           2941543-2941633
          Length = 877

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 75  ADRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQS 254
           AD+ + +A  Q+ E+SD +   SS+    +  P    P R LR R  + +    A+ S S
Sbjct: 796 ADKENGLASSQQSEDSDEIEATSSNDSTKKSSP----PWRKLRHRKAIYQDKDTAMPSNS 851


>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
          Length = 874

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 132 PPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTN 236
           PP+SSSS  A+     E P R+ RP +  T  TT+
Sbjct: 680 PPSSSSSSPARSSGSTEQPHRSKRPWAETTTTTTS 714


>02_02_0280 - 8515894-8517309
          Length = 471

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +3

Query: 75  ADRMSQIAEEQKLEESD--GLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSS 248
           AD+   +A + K   SD  G     + ++AAQ K   +    A+       +KT++ ++ 
Sbjct: 338 ADKAGDMAGQTKDTTSDTTGGMAHKAGAMAAQTKDTVKDAAAAM------AQKTSDTIAQ 391

Query: 249 QSVGSGGSAKRKTALNKNQIPKTNVHSGGDG 341
              G+G +  R     KN    T + SGG G
Sbjct: 392 AGHGAGEAKNRAAESGKNSSATTTIGSGGGG 422


>09_04_0362 -
           16953108-16953155,16953478-16953562,16953626-16953702,
           16954601-16954641,16955140-16955644,16955897-16956316
          Length = 391

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = +3

Query: 87  SQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSVGSG 266
           +QIA     +    L P+ ++S +A   P    P  A    S  +  TT  LSS   G+ 
Sbjct: 201 TQIAGTVTSQPQQSLIPSGATSSSAF--PSFSTPASAPSSSSLFSTPTTPTLSSNLFGTS 258

Query: 267 GSAKRKTALNKNQIP 311
           GSA+  T       P
Sbjct: 259 GSAQLSTPFGTVSTP 273


>06_03_1157 -
           28074675-28074710,28075318-28075514,28075676-28075875,
           28076190-28076287,28076798-28076854,28076952-28077010,
           28077705-28077738,28077840-28077890
          Length = 243

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = +3

Query: 120 SDGLPPASSS--SIAAQEKP--RXELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKT 287
           SD L P S    S AA+E P    E+     R     TRK + ALS+   G  G  +R++
Sbjct: 114 SDTLKPCSKDQGSSAAKEDPYNAYEMSPSDQRQNHETTRKRSVALSTSEEGRNGKKRRES 173

Query: 288 ALNKN 302
             N++
Sbjct: 174 YDNRD 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,258,528
Number of Sequences: 37544
Number of extensions: 494590
Number of successful extensions: 1165
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4143716112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)