Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K09
         (1324 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    26   2.1  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    26   2.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.8  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +3

Query: 99  EEQKLEESDGLPPASSSSIAAQEKPRXELP----TRALRPRSTLTRKTTNALSSQSVGSG 266
           + QK  ESD     SSS +  Q++ +   P    T ALR +   +    ++ SS+   S 
Sbjct: 16  KRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEESA 75

Query: 267 G 269
           G
Sbjct: 76  G 76


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +3

Query: 99  EEQKLEESDGLPPASSSSIAAQEKPRXELP----TRALRPRSTLTRKTTNALSSQSVGSG 266
           + QK  ESD     SSS +  Q++ +   P    T ALR +   +    ++ SS+   S 
Sbjct: 16  KRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEESA 75

Query: 267 G 269
           G
Sbjct: 76  G 76


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 14/67 (20%), Positives = 30/67 (44%)
 Frame = +3

Query: 135 PASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKTALNKNQIPK 314
           P   S  +++++     P   +    +  +++T    ++  GSGG++      N   IP 
Sbjct: 410 PTRPSPKSSRKRRTGHRPPAGMNASMSSGKRSTATHQAEYGGSGGASSSINNNNNVTIPN 469

Query: 315 TNVHSGG 335
            N+ +GG
Sbjct: 470 NNLLTGG 476



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = -3

Query: 1247 PPXLGGXPXPXXGXPXGXGXXKAPXXP 1167
            PP +G  P P  G P G      P  P
Sbjct: 588  PPPMGPPPSPLAGGPLGGPAGSRPPLP 614


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,003,301
Number of Sequences: 2352
Number of extensions: 16445
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152871378
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)