Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_K09
(1324 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 36 0.064
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 36 0.064
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 36 0.064
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 36 0.064
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 36 0.064
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 36 0.064
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 36 0.064
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 36 0.064
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 31 1.4
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 31 1.4
Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical p... 29 9.7
Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical p... 29 9.7
Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical p... 29 9.7
Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical pr... 29 9.7
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 9.7
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 9.7
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 9.7
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 672 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 730
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 731 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 790
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 791 PSSSSSSS 798
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 825 PSSSSSSS 832
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 921 PSSSSSSS 928
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical protein
H39E23.1c protein.
Length = 1062
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 672 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 730
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 731 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 790
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 791 PSSSSSSS 798
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical protein
H39E23.1b protein.
Length = 1096
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 825 PSSSSSSS 832
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical protein
H39E23.1a protein.
Length = 1192
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 921 PSSSSSSS 928
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 706 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 764
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 765 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 824
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 825 PSSSSSSS 832
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 35.9 bits (79), Expect = 0.064
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +3
Query: 78 DRMSQIAEEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSV 257
D S +EQ+ +++ P S + P P++ + +L + +V
Sbjct: 802 DATSSSDKEQQQQKASSETPKESKPSMIHQSPSMP-PSQMMTAMESLKLSESGQTGGPTV 860
Query: 258 GSGGSAKRKTALNKNQIPKTN-----VHSGGDGCLLLERTTLSGIPLIQDDNDQGWRPDA 422
+GG +R T+ ++ TN SGG LSG P + Q + P A
Sbjct: 861 ATGGPPQRATSQQMSRSATTNSANMGASSGGAAAAASATNQLSGAPSSTGASSQQYHPKA 920
Query: 423 YSSEHSMS 446
SS S S
Sbjct: 921 PSSSSSSS 928
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 165 EKPRXELPTRALRPRSTLTRKTTNALSSQSVGS 263
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 165 EKPRXELPTRALRPRSTLTRKTTNALSSQSVGS 263
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 165 EKPRXELPTRALRPRSTLTRKTTNALSSQSVGS 263
EK R E T A + RST+T ++ + LSS+S+ S
Sbjct: 889 EKERSEASTPASKSRSTITARSNSVLSSRSMAS 921
>Z82096-15|CAD45621.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 234 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 413
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 414 PDAYSS 431
A ++
Sbjct: 63 NPAQNT 68
>Z82096-13|CAD45619.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 234 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 413
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 414 PDAYSS 431
A ++
Sbjct: 63 NPAQNT 68
>Z81511-10|CAD45588.1| 397|Caenorhabditis elegans Hypothetical
protein ZK909.2j protein.
Length = 397
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 234 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 413
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 414 PDAYSS 431
A ++
Sbjct: 63 NPAQNT 68
>Z81511-8|CAD45586.1| 381|Caenorhabditis elegans Hypothetical
protein ZK909.2h protein.
Length = 381
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +3
Query: 234 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 413
NA S S G GGSA+R N N +G L T + ++D Q W
Sbjct: 3 NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62
Query: 414 PDAYSS 431
A ++
Sbjct: 63 NPAQNT 68
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +3
Query: 111 LEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKT 287
L + +PP +S+S +KP + P ST T TT + S + S T
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +3
Query: 111 LEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKRKT 287
L + +PP +S+S +KP + P ST T TT + S + S T
Sbjct: 577 LRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTT 635
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +3
Query: 99 EEQKLEESDGLPPASSSSIAAQEKPRXELPTRALRPRSTLTRKTTNALSSQSVGSGGSAK 278
++++ E S +P ASS I++QE+P E T + + S ++ ++ +S+ + + K
Sbjct: 221 KKKEAEASTSVPQASSPDISSQEQP--ESSTSSSKKPSKKEKEPSDPMSTFVLDNWKKKK 278
Query: 279 RKTALNKN 302
R LN +
Sbjct: 279 RDYKLNSS 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,265,256
Number of Sequences: 27780
Number of extensions: 406877
Number of successful extensions: 938
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3704777368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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