Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K07
         (1263 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            34   0.010
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   1.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 33.9 bits (74), Expect = 0.010
 Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
 Frame = -1

Query: 822 PPPPPPPXXKKXXXXXXXXXFXPXXXGXXXXXXXPXXPXKXFFS---PPFXXGXPPPXXX 652
           PPPPPPP             F P           P  P +  F    P      PPP   
Sbjct: 530 PPPPPPPGGA---VLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP--- 583

Query: 651 FFFXGAPXPPPXGXPPPP 598
                 P PPP G PP P
Sbjct: 584 ----APPPPPPMGPPPSP 597


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 675 GXPPPXXXFFFXGAPXPPPXGXPPP 601
           G P P    F  G   PPP   PPP
Sbjct: 767 GMPSPSRSAFADGIGSPPPPPPPPP 791



 Score = 24.2 bits (50), Expect = 8.2
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = -3

Query: 865 PXPXGGGXFXXXXXPPPPPPXP 800
           P P           PPPPPP P
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPP 790


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,274
Number of Sequences: 2352
Number of extensions: 14883
Number of successful extensions: 253
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 144696438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)