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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K05
         (1266 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos...   226   6e-60
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa...    72   1e-13
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb...    39   0.001
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha...    36   0.012
SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce...    33   0.11 
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos...    32   0.15 
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p...    31   0.34 
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ...    31   0.45 
SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyce...    30   0.78 
SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomy...    29   1.0  
SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit Cut9|...    29   1.8  
SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces pom...    28   2.4  
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce...    28   2.4  
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom...    28   3.1  
SPAC144.15c |cog1||Golgi transport complex subunit Cog1 |Schizos...    28   3.1  
SPBC4.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Ma...    27   4.2  
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi...    27   4.2  
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo...    27   5.5  
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po...    27   5.5  
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi...    27   7.3  
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo...    27   7.3  
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch...    27   7.3  
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ...    26   9.6  
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual     26   9.6  

>SPCC338.07c |||NatA N-acetyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 729

 Score =  226 bits (552), Expect = 6e-60
 Identities = 119/262 (45%), Positives = 160/262 (61%), Gaps = 2/262 (0%)
 Frame = +1

Query: 154 LPPKENALCKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLNCLGRKDEA 333
           L PKE  L +  L+CYE KQYK GLK  + +L   +  EHGE+LA+KG+ L+ LG   E 
Sbjct: 6   LSPKEITLFRTALKCYETKQYKKGLKAIEPLLE--RHPEHGESLAIKGILLHSLGNTKEG 63

Query: 334 YDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQI 513
           YD VR GLRND+ S VCWH++GL+ R+DK Y +A KCY NA K EK N  +LRDL+LLQ 
Sbjct: 64  YDNVRLGLRNDVGSGVCWHIFGLISRADKDYVQAAKCYINAHKLEKNNSSLLRDLALLQS 123

Query: 514 QMRDLEGYKDTRYQLFMLRPTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKG-PYD 690
           Q+R  +   DTR  L    P  RA+W   A++  L G+Y  A  I+DAF +   +G P D
Sbjct: 124 QLRQYKALADTRNALLQDNPGVRANWSALAVAQFLRGEYASAYKIVDAFESTINQGVPVD 183

Query: 691 -YEHSELLLYQNMVLAESGQYERALQHLQKFESQILDKLSVKETSGEYYLKLNRFXEAEG 867
             E SE +L+ N+V+ +    E A +HL   E ++LD+++  ET  EY L L++  EA+ 
Sbjct: 184 TQEESEAMLFMNLVILKKDGVEDAYKHLLSIEKKVLDRVAFLETRAEYELYLSKMEEAKS 243

Query: 868 IYEDLLKRNPENVLYYNKLXEA 933
               LL RNP+N  YY  L  A
Sbjct: 244 TIYLLLDRNPDNHQYYYNLQRA 265


>SPBC418.02 |||NatA N-acetyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 695

 Score = 72.1 bits (169), Expect = 1e-13
 Identities = 61/256 (23%), Positives = 106/256 (41%)
 Frame = +1

Query: 154 LPPKENALCKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLNCLGRKDEA 333
           L  KE  L  R +  +E  QY   LK  + +L   K  +H +++A+ GL L  L     A
Sbjct: 4   LSEKEAFLFDRSIDQFEKGQYSKSLKTIQSVLK--KKPKHPDSVALLGLNLCKLHDSRSA 61

Query: 334 YDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQI 513
                     D KS  CWH   ++ R  K Y+ ++KCY+NAL     N  +  D + LQ 
Sbjct: 62  LLKCGYASSIDPKSQFCWHALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQA 121

Query: 514 QMRDLEGYKDTRYQLFMLRPTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGPYDY 693
           Q+   +   D   +L  L  +     + F +S  L G+Y+ +   +    +     P   
Sbjct: 122 QLGLYQPLFDNWNRLLQLDSSNLEYRLCFTLSAFLSGNYKESLEQIQYLISSCNLSPLVV 181

Query: 694 EHSELLLYQNMVLAESGQYERALQHLQKFESQILDKLSVKETSGEYYLKLNRFXEAEGIY 873
                 L +     E+G  +  L+ L   ++  L+  + +    ++  +   + E+  +Y
Sbjct: 182 SRLISFLPRICEHIENGS-QTVLEILLMNQNSFLNNFNFEHIKADFAFRQKNYEESIYLY 240

Query: 874 EDLLKRNPENVLYYNK 921
             LL + P  + Y  K
Sbjct: 241 ARLLIKFPNRLDYSEK 256


>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1389

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
 Frame = +1

Query: 331  AYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQ 510
            A + +++ ++ + K+ V W++ G+L    K    A  CY  +L   + +  +  +   L 
Sbjct: 915  AINCIKQAIKLEAKNYVFWNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALC 974

Query: 511  IQMRDLEGYKDTRYQLFMLRPTQRASWIGFAMSYHLLGDYEMANSIL-DAFRTHQMKGP- 684
            IQ  D+E       +   + P    +W+G A     +G    A  I+  AF     K P 
Sbjct: 975  IQNHDVECANAAFTRSISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFEISSGKMPD 1034

Query: 685  YDYEHSELLLY 717
             +Y +++ +L+
Sbjct: 1035 VNYWYADTMLH 1045


>SPBC23E6.09 |ssn6||transcriptional corepressor
           Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1102

 Score = 35.9 bits (79), Expect = 0.012
 Identities = 30/158 (18%), Positives = 61/158 (38%), Gaps = 4/158 (2%)
 Frame = +1

Query: 202 EHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLN----CLGRKDEAYDYVRRGLRNDL 369
           + K+YK   +  +++L+      H + L   G   +        +D A  Y+ + L  D 
Sbjct: 524 QRKEYKLAKEAYERVLAETP--NHAKVLQQLGWLCHQQSSSFTNQDLAIQYLTKSLEADD 581

Query: 370 KSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDLEGYKDTR 549
                W++ G    + +KY++A + Y+ A+  +  N      + +L  Q+   +   D  
Sbjct: 582 TDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAY 641

Query: 550 YQLFMLRPTQRASWIGFAMSYHLLGDYEMANSILDAFR 663
            +   L P     W      Y     +   +  LDA++
Sbjct: 642 SRAIRLNPYISEVWYDLGTLYE--SCHNQISDALDAYQ 677


>SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 442

 Score = 32.7 bits (71), Expect = 0.11
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 376 PVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLS 501
           PV WH    + R  + Y    KC+R+ L W  E   I   LS
Sbjct: 175 PVQWHNNPYIIRGYRFYTSKRKCFRSILSWHNETFNIWTHLS 216


>SPBC725.07 |pex5||peroxisomal targeting signal receptor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 13/75 (17%), Positives = 38/75 (50%)
 Frame = +1

Query: 295 GLTLNCLGRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKE 474
           G+ +  L   + + D  R+ L+++  + + W+  G    + +K  EA+  Y  A+  + +
Sbjct: 445 GIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQ 504

Query: 475 NIQILRDLSLLQIQM 519
            +++  ++++  I +
Sbjct: 505 YVRVRSNMAVSNINL 519


>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 728

 Score = 31.1 bits (67), Expect = 0.34
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +1

Query: 706 LLLYQNMVLAESGQYERALQHLQKFESQILDKLSVKETSGEYYLKLNRFXEAEGIYEDLL 885
           L+L QN+ L ES   + A + +  + S           SG Y    N+    EG+YED  
Sbjct: 466 LVLQQNLELLESVMLDYAFEGIAFYGSS-----DEAWASGNYTTLSNKEFLIEGVYEDSN 520

Query: 886 KRNPENVL-YYNKLXEAKT 939
            RN  ++L   N++ E +T
Sbjct: 521 SRNKRDLLRINNEIYEVQT 539


>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 3655

 Score = 30.7 bits (66), Expect = 0.45
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 268  EHGETLAMKGLTLNCLGRKDEAYDYVRRGLRNDLKSPVCWHVYGL 402
            +  E   +KG+  N LG KDEA       ++ D+ S   W  +GL
Sbjct: 2886 QKAEFFTLKGMFQNRLGEKDEANQAFATAVQIDIGSGKAWSEWGL 2930


>SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 288

 Score = 29.9 bits (64), Expect = 0.78
 Identities = 21/79 (26%), Positives = 35/79 (44%)
 Frame = +1

Query: 316 GRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 495
           G  D+A D +++ + N     V   VY  +   + K + A +  + AL W  E I +   
Sbjct: 110 GSFDDAMDLLKKSVEN--LEAVALQVY--IHLREHKIEAAEQTLKQALDWADEEIVLQLA 165

Query: 496 LSLLQIQMRDLEGYKDTRY 552
            S ++I    +E Y D  Y
Sbjct: 166 QSWIKIVSGGVESYNDAFY 184


>SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 773

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +1

Query: 451 NALKWEKENIQILRDLSLLQIQMRDLEGYKDTRYQ 555
           NA+K +++ +Q+L+DL  L+  ++D   Y  TR Q
Sbjct: 715 NAIKNDEQELQMLKDLGNLESGVKDRAHYLTTRIQ 749


>SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit
           Cut9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 671

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
 Frame = +1

Query: 586 SWIGFAMSYHLLGDYEMA-NSILDAFRTHQ-MKGPYDYEHSELLLYQNMVLAESGQYERA 759
           +WIGFA S+ + G+++ A ++   A R  Q    PY +   + +   N++LA   +Y ++
Sbjct: 409 AWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLA--NEYLQS 466

Query: 760 LQHLQKFESQILDKLSVKE-TSGEYYLKLNRFXEA 861
              L +++  +L++L V      +    +N F  A
Sbjct: 467 SYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNA 501


>SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 910

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
 Frame = +1

Query: 517 MRDLEGYKDT-RY-QLFMLRPTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGPYD 690
           ++  E ++DT +Y Q  M+  T+  ++I   M    L +Y+   SI +   + Q      
Sbjct: 455 LKSNELFRDTDQYTQRQMIEITKENAYI---MLMRYLKNYKKNTSISEYLLSSQRDVMLA 511

Query: 691 YEHSELLLYQNMVLAESGQYERALQHLQKFESQILDKLSVKETSGEYYL 837
            EHS LLLY NM    +G  + A + L+   + + D   V     EYYL
Sbjct: 512 VEHSLLLLYLNMDDLAAGT-KNAKELLESGLTGVEDIKDVLIQKKEYYL 559


>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2104

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 433  AIKCYRNALKWEKENIQILRDLSLLQIQMRDLE 531
            A+K  +++    +EN+Q+ R L +LQ + +DLE
Sbjct: 1917 ALKTQKDSNNHREENLQLHRQLGVLQKEKKDLE 1949


>SPBC947.12 |kms2||spindle pole body protein
           Kms2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 457

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 400 LLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDL 528
           LL+  D   +    CY  A  WEK+  + LRD      Q++ +
Sbjct: 201 LLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQLQTI 243


>SPAC144.15c |cog1||Golgi transport complex subunit Cog1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 701

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 727 VLAESGQYER--ALQHLQKFESQILDKLSVKETSGEYYLKLNRFXEAEGIYEDLLKRNPE 900
           VL  S +++   +L  + +    + D  S+ +TSG+Y++ L RF  A  I   +   N E
Sbjct: 72  VLQNSYEFQSMVSLPKVDRVSKFLSDNESISQTSGDYFIFLQRFY-AHAILFVMELFNKE 130

Query: 901 NVLYYNKL 924
             L  +KL
Sbjct: 131 QYLQSSKL 138


>SPBC4.01 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 248

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 346 VHSHMPHPCDLSNLMLDLSWL 284
           +++++PHP   SN +L ++WL
Sbjct: 17  IYNYIPHPSIFSNAILGIAWL 37


>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
           Tom70|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 625

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/54 (24%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +1

Query: 385 WHVYGLLQRSDKKYDEAIKCYRNALKWEK-ENIQILRDLSLLQIQMRDLEGYKD 543
           ++ +G +    +K+D+A+K + +A++ EK E++ I+  + L+   +   +  KD
Sbjct: 486 YNYFGEILLDQQKFDDAVKNFDHAIELEKREHLTIMSAMPLINKALAVFQWKKD 539


>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 509

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +1

Query: 778 FESQILDK-LSVKETSGEYYLKLNRFXEA----EGIYEDLLKRNPENVLYYNKLXEAKTT 942
           ++S  LD+ +  K  S  + +  N F E     E +  D+L  N + VL+Y    + KTT
Sbjct: 49  YKSNFLDRFIPSKANSDAFRIMENAFTEKLNTQESLLPDILNLNVKGVLHYKDNKKQKTT 108


>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 467

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
 Frame = -3

Query: 922 TYCSTKHFRDFSLTSLR---KFLLLP*ICSILSNIPQKFLSQIIYPEFDFQTSVNAARLS 752
           TY  TK  R F   S +     LLL  +C +  ++P      ++  E DF T   ++ + 
Sbjct: 326 TYYPTKAIRFFERLSKQFPHHSLLLMDVCHVDKSLPGINAPSVLSMENDFSTKKMSSNIG 385

Query: 751 HIVLIRPVPY 722
           H+     V Y
Sbjct: 386 HVFQNETVKY 395


>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 817

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +1

Query: 361 NDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRD 525
           N L  P  W  YG      +KYD A++ +   L    E+ +   +L+   ++ +D
Sbjct: 551 NPLSYPT-WFTYGCAALELQKYDAAMEAFSRCLSINPEDGESWNNLASAMLKAKD 604


>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
           Stt3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 752

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 745 VLIRPVPYSGIIAILSVHNHMDLSSDECGM 656
           VL+ P  +SGI AI + +   +L SD CG+
Sbjct: 123 VLLAPA-FSGITAIATYYLARELKSDACGL 151


>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
           Spo14|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 395

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -2

Query: 596 PIHDALCVGLSMKS*YLVS 540
           P+HDA+C+  + KS +++S
Sbjct: 133 PLHDAICISCTNKSFFIIS 151


>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 565

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = +1

Query: 232 FAKQILSNPKFAEHGETLAMKGLTLNCLGRKDEAYDYVRRGLR-NDLKSPVCWHVYGLLQ 408
           ++K +    K  E  ETL    LTL+   R+      V   L     K P   ++ G++ 
Sbjct: 124 YSKYLAGEKKSEEENETLLNTNLTLSSTNREFYYISEVLESLHYQGNKDPYLLYLSGVVY 183

Query: 409 RSDKKYDEAI 438
           R  K+  +AI
Sbjct: 184 RKRKQDSKAI 193


>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 935

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 715 YQNMVLA--ESGQYERALQHLQKFESQILDKL 804
           + N V+A  ESG+YE A++H   F   +L  L
Sbjct: 406 FYNSVIADIESGEYEIAIEHCFHFSQTVLSGL 437


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,384,450
Number of Sequences: 5004
Number of extensions: 90967
Number of successful extensions: 271
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 687563588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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