Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K05
         (1266 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical ...   292   3e-79
Z92822-9|CAL49448.1|  576|Caenorhabditis elegans Hypothetical pr...    33   0.43 
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    33   0.43 
Z82094-5|CAL49446.1|  576|Caenorhabditis elegans Hypothetical pr...    33   0.43 
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    33   0.43 
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      33   0.43 
U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical pr...    32   0.75 
U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of hsp70...    32   0.99 
AF303269-1|AAG50227.1|  266|Caenorhabditis elegans Hsp70-interac...    32   0.99 
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    31   2.3  
AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical ...    29   5.3  
Z22179-14|CAI06052.1|  443|Caenorhabditis elegans Hypothetical p...    29   7.0  

>AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical
           protein Y50D7A.4 protein.
          Length = 852

 Score =  292 bits (717), Expect = 3e-79
 Identities = 133/260 (51%), Positives = 192/260 (73%)
 Frame = +1

Query: 145 SNPLPPKENALCKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLNCLGRK 324
           S PLP KE    K+I++ YE KQYK GLKFA++IL++P FAEHGETLAMKGL LNC+G+ 
Sbjct: 10  SQPLPAKELGYFKKIVKSYEQKQYKAGLKFAQKILTSPGFAEHGETLAMKGLILNCMGKL 69

Query: 325 DEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSL 504
            EA D VRRGL +DL+S VCWHV+GL+Q+++KKYDEAIK Y+ AL  EK+N+QILRDLSL
Sbjct: 70  QEAQDCVRRGLVSDLRSYVCWHVFGLIQKTEKKYDEAIKAYKRALMLEKDNLQILRDLSL 129

Query: 505 LQIQMRDLEGYKDTRYQLFMLRPTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGP 684
           LQI +RD +GY  ++Y+L  LR TQR SW+G+ +++HLL ++ +A  I+  +  +     
Sbjct: 130 LQIHIRDYDGYLSSKYELLQLRQTQRVSWLGYIVAHHLLKEHNLALGIMAEYIKNNTPSG 189

Query: 685 YDYEHSELLLYQNMVLAESGQYERALQHLQKFESQILDKLSVKETSGEYYLKLNRFXEAE 864
           YD+E SEL+LYQN+++ E+G  + ALQ L++  + I+DK++  ET     + L +  +AE
Sbjct: 190 YDFEFSELILYQNLIMREAGLPDVALQKLEENSTHIVDKVAYMETRANLLMDLEQPKQAE 249

Query: 865 GIYEDLLKRNPENVLYYNKL 924
            ++  L++RNP+++ YY+ L
Sbjct: 250 NVWRALIERNPDSLEYYDML 269


>Z92822-9|CAL49448.1|  576|Caenorhabditis elegans Hypothetical
           protein ZK520.3b protein.
          Length = 576

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 355 LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 495
           L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 126 LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 171


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical protein
            ZK520.3a protein.
          Length = 1383

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 355  LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 495
            L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 933  LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 978


>Z82094-5|CAL49446.1|  576|Caenorhabditis elegans Hypothetical
           protein ZK520.3b protein.
          Length = 576

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 355 LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 495
           L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 126 LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 171


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical protein
            ZK520.3a protein.
          Length = 1383

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 355  LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 495
            L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 933  LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 978


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 355  LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 495
            L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 933  LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 978


>U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical
           protein F38B6.6 protein.
          Length = 690

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
 Frame = +1

Query: 379 VCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDLEGYKDTRYQL 558
           V W   G+ Q + KKY EA K  +N+L     +   L +L +L  +    E         
Sbjct: 501 VAWMNLGISQMNLKKYYEAEKSLKNSLLIRPNSAHCLFNLGVLYQRTNRDEMAMSAWKNA 560

Query: 559 FMLRPTQRASWIG-FAMSYHLLG-------DYEMANSILDAFRTHQMKGPYDYEHSELLL 714
             + P+   SW   F +  HL          Y+  +S+ +  R H   G    +HS    
Sbjct: 561 TRIDPSHSQSWTNLFVVLDHLSQCSQVIDLSYQALSSVPNESRVHMQIGSCHAKHSNFTA 620

Query: 715 YQNMV 729
            +N +
Sbjct: 621 AENHI 625


>U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of
           hsp70-interacting protein(chip family) protein 1
           protein.
          Length = 266

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = +1

Query: 193 RCYEHKQYKNGLK-FAKQILSNPKFAEHGETLAMKGLTLNCLGRKDEAYDYVRRGLRNDL 369
           +CY +K+Y + +  ++K I  NP   ++ +  AM    LN L   +E          N++
Sbjct: 14  KCYMNKRYDDAVDHYSKAIKVNP-LPKYYQNRAMCYFQLNNLKMTEEDCKRALELSPNEV 72

Query: 370 KSPVCWHVYGLLQRSDKKYDEAIKCYRNAL 459
           K P+  +  G +    KKY EAI C   AL
Sbjct: 73  K-PL--YFLGNVFLQSKKYSEAISCLSKAL 99


>AF303269-1|AAG50227.1|  266|Caenorhabditis elegans
           Hsp70-interacting protein protein.
          Length = 266

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = +1

Query: 193 RCYEHKQYKNGLK-FAKQILSNPKFAEHGETLAMKGLTLNCLGRKDEAYDYVRRGLRNDL 369
           +CY +K+Y + +  ++K I  NP   ++ +  AM    LN L   +E          N++
Sbjct: 14  KCYMNKRYDDAVDHYSKAIKVNP-LPKYYQNRAMCYFQLNNLKMTEEDCKRALELSPNEV 72

Query: 370 KSPVCWHVYGLLQRSDKKYDEAIKCYRNAL 459
           K P+  +  G +    KKY EAI C   AL
Sbjct: 73  K-PL--YFLGNVFLQSKKYSEAISCLSKAL 99


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 25/123 (20%), Positives = 53/123 (43%)
 Frame = +1

Query: 397 GLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDLEGYKDTRYQLFMLRPT 576
           G L   DKK++EA K  R +L+ +   +    +      ++ + +      ++   L+P 
Sbjct: 458 GHLLLMDKKFEEAYKHLRRSLELQPIQLGTWFNAGYCAWKLENFKESTQCYHRCVSLQPD 517

Query: 577 QRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGPYDYEHSELLLYQNMVLAESGQYER 756
              +W   + +Y   G    A  +L       +K  Y+YEH  +     ++  + G++ +
Sbjct: 518 HFEAWNNLSAAYIRHGQKPKAWKLLQ----EALK--YNYEHPNVWENYMLLSVDVGEFSQ 571

Query: 757 ALQ 765
           A+Q
Sbjct: 572 AIQ 574


>AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.3 protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 9/23 (39%), Positives = 18/23 (78%)
 Frame = -1

Query: 447 VTFYCLIVFLVRALQQPIHMPTY 379
           V + CL+V+ +R++Q+ + +PTY
Sbjct: 39  VKYICLLVYCIRSMQEHLSVPTY 61


>Z22179-14|CAI06052.1|  443|Caenorhabditis elegans Hypothetical
           protein F58A4.14 protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = +1

Query: 370 KSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKEN 477
           ++   +HV GL+ R++ + +EA++C+  A +   +N
Sbjct: 87  RNEAAFHVRGLIARNEGELEEAMECFHKAYELSGKN 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,041,093
Number of Sequences: 27780
Number of extensions: 502254
Number of successful extensions: 1232
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)