Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K04
         (1313 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007426-1|AAH07426.1|  172|Homo sapiens TAF9 RNA polymerase II,...    58   7e-08
BC007349-1|AAH07349.1|  172|Homo sapiens TAF9 RNA polymerase II,...    58   7e-08
AJ878881-1|CAI48031.1|  172|Homo sapiens coilin-interacting nulc...    58   7e-08
AJ878880-1|CAI48030.1|  172|Homo sapiens coilin-interacting nucl...    58   7e-08
AF151895-1|AAD34132.1|  172|Homo sapiens CGI-137 protein protein.      58   7e-08
AF110777-1|AAF14860.1|  172|Homo sapiens adrenal gland protein A...    58   7e-08

>BC007426-1|AAH07426.1|  172|Homo sapiens TAF9 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 32kDa
           protein.
          Length = 172

 Score = 58.0 bits (134), Expect = 7e-08
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 326 LPNVLVTGTPGVGKXTLCRNLXDRTKFGWRDVSNMXQEXN*LDEYDXEYXXRFLNEDKVV 505
           LPN+L+TGTPGVGK TL + L  ++   + +V ++ +E    D YD EY    L+ED+VV
Sbjct: 3   LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62


>BC007349-1|AAH07349.1|  172|Homo sapiens TAF9 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 32kDa
           protein.
          Length = 172

 Score = 58.0 bits (134), Expect = 7e-08
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 326 LPNVLVTGTPGVGKXTLCRNLXDRTKFGWRDVSNMXQEXN*LDEYDXEYXXRFLNEDKVV 505
           LPN+L+TGTPGVGK TL + L  ++   + +V ++ +E    D YD EY    L+ED+VV
Sbjct: 3   LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62


>AJ878881-1|CAI48031.1|  172|Homo sapiens coilin-interacting nulcear
           ATPase protein protein.
          Length = 172

 Score = 58.0 bits (134), Expect = 7e-08
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 326 LPNVLVTGTPGVGKXTLCRNLXDRTKFGWRDVSNMXQEXN*LDEYDXEYXXRFLNEDKVV 505
           LPN+L+TGTPGVGK TL + L  ++   + +V ++ +E    D YD EY    L+ED+VV
Sbjct: 3   LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62


>AJ878880-1|CAI48030.1|  172|Homo sapiens coilin-interacting nuclear
           ATPase protein protein.
          Length = 172

 Score = 58.0 bits (134), Expect = 7e-08
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 326 LPNVLVTGTPGVGKXTLCRNLXDRTKFGWRDVSNMXQEXN*LDEYDXEYXXRFLNEDKVV 505
           LPN+L+TGTPGVGK TL + L  ++   + +V ++ +E    D YD EY    L+ED+VV
Sbjct: 3   LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62


>AF151895-1|AAD34132.1|  172|Homo sapiens CGI-137 protein protein.
          Length = 172

 Score = 58.0 bits (134), Expect = 7e-08
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 326 LPNVLVTGTPGVGKXTLCRNLXDRTKFGWRDVSNMXQEXN*LDEYDXEYXXRFLNEDKVV 505
           LPN+L+TGTPGVGK TL + L  ++   + +V ++ +E    D YD EY    L+ED+VV
Sbjct: 3   LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62


>AF110777-1|AAF14860.1|  172|Homo sapiens adrenal gland protein
           AD-004 protein.
          Length = 172

 Score = 58.0 bits (134), Expect = 7e-08
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 326 LPNVLVTGTPGVGKXTLCRNLXDRTKFGWRDVSNMXQEXN*LDEYDXEYXXRFLNEDKVV 505
           LPN+L+TGTPGVGK TL + L  ++   + +V ++ +E    D YD EY    L+ED+VV
Sbjct: 3   LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,080,194
Number of Sequences: 237096
Number of extensions: 949451
Number of successful extensions: 1259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18990949350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)