Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_K03
         (1279 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1074|AAN09217.1|   56|Drosophila melanogaster CG18624-P...    62   2e-09
AE014298-1073|AAF46285.1|   56|Drosophila melanogaster CG18624-P...    62   2e-09

>AE014298-1074|AAN09217.1|   56|Drosophila melanogaster CG18624-PB,
           isoform B protein.
          Length = 56

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +1

Query: 307 IFGITPRFIWFGVPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRV-KEGDPPTW 468
           + G+  R +W  +P+ GF IG FLD +ET RMT FRDKSAL+G     EG  P+W
Sbjct: 2   VLGLDKRALWGALPLLGFAIGHFLDKKETERMTMFRDKSALYGRPAGSEGKAPSW 56


>AE014298-1073|AAF46285.1|   56|Drosophila melanogaster CG18624-PA,
           isoform A protein.
          Length = 56

 Score = 61.7 bits (143), Expect = 2e-09
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +1

Query: 307 IFGITPRFIWFGVPMTGFFIGKFLDDQETLRMTSFRDKSALFGGRV-KEGDPPTW 468
           + G+  R +W  +P+ GF IG FLD +ET RMT FRDKSAL+G     EG  P+W
Sbjct: 2   VLGLDKRALWGALPLLGFAIGHFLDKKETERMTMFRDKSALYGRPAGSEGKAPSW 56


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,221,084
Number of Sequences: 53049
Number of extensions: 799885
Number of successful extensions: 1556
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6886109490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)