Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_J24
         (1273 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060913-1|AAL28461.1|  155|Drosophila melanogaster GM05817p pro...   146   6e-35
AE013599-1797|AAM68563.1|  155|Drosophila melanogaster CG30481-P...   146   6e-35
AE013599-1800|AAO41392.1|   60|Drosophila melanogaster CG33155-P...    82   1e-15
AE013599-1799|AAM68564.1|   60|Drosophila melanogaster CG33155-P...    82   1e-15
AE013599-1798|AAO41393.1|   60|Drosophila melanogaster CG33155-P...    82   1e-15
AY071383-1|AAL49005.1|  409|Drosophila melanogaster RE42228p pro...    31   2.5  
AE014297-1338|AAG22145.1|  409|Drosophila melanogaster CG18764-P...    31   2.5  

>AY060913-1|AAL28461.1|  155|Drosophila melanogaster GM05817p
           protein.
          Length = 155

 Score =  146 bits (354), Expect = 6e-35
 Identities = 65/126 (51%), Positives = 88/126 (69%)
 Frame = +3

Query: 90  MSXPYXGTIRXSKGVVSAIGKQLKAVNLKAXKKITIKFDPFGENATHTRNFAHYISAPKI 269
           MS P+ G +R S G+VSAIGKQLK+VNLK  K+IT++FDPF EN   TR F   +S PK+
Sbjct: 1   MSVPFIGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTREFLFLLSTPKV 60

Query: 270 AITNPNCSVKTEVLCDRSEPTVEITLLPAIAATAKIQKVTLRSENLTCLEILQLLNKHIS 449
           A TNP C VK E++CDR    ++  L+ +    A+++++   S+NL  LE+LQL NKH+S
Sbjct: 61  AATNPKCVVKPEIVCDRQPANIKFALIDSAQEQAQVKEIRFNSDNLNTLELLQLCNKHVS 120

Query: 450 SLAPVE 467
           SLAP E
Sbjct: 121 SLAPRE 126


>AE013599-1797|AAM68563.1|  155|Drosophila melanogaster CG30481-PA,
           isoform A protein.
          Length = 155

 Score =  146 bits (354), Expect = 6e-35
 Identities = 65/126 (51%), Positives = 88/126 (69%)
 Frame = +3

Query: 90  MSXPYXGTIRXSKGVVSAIGKQLKAVNLKAXKKITIKFDPFGENATHTRNFAHYISAPKI 269
           MS P+ G +R S G+VSAIGKQLK+VNLK  K+IT++FDPF EN   TR F   +S PK+
Sbjct: 1   MSVPFSGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTREFLFLLSTPKV 60

Query: 270 AITNPNCSVKTEVLCDRSEPTVEITLLPAIAATAKIQKVTLRSENLTCLEILQLLNKHIS 449
           A TNP C VK E++CDR    ++  L+ +    A+++++   S+NL  LE+LQL NKH+S
Sbjct: 61  AATNPKCVVKPEIVCDRQPANIKFALIDSAQEQAQVKEIRFNSDNLNTLELLQLCNKHVS 120

Query: 450 SLAPVE 467
           SLAP E
Sbjct: 121 SLAPRE 126


>AE013599-1800|AAO41392.1|   60|Drosophila melanogaster CG33155-PD,
           isoform D protein.
          Length = 60

 Score = 82.2 bits (194), Expect = 1e-15
 Identities = 37/56 (66%), Positives = 48/56 (85%)
 Frame = +2

Query: 539 KPKGNLDVIEEIYRQIPAFTDVFSEDTFYVFVTFFVLSTILVAFVLSRFITIKPVE 706
           K KG L VIE+IY+ IPAF+D+F+E++FY+F   FV +TILVAF+LSRFITIKPV+
Sbjct: 4   KHKGTLAVIEKIYQDIPAFSDIFTEESFYMFAFCFVCATILVAFILSRFITIKPVD 59


>AE013599-1799|AAM68564.1|   60|Drosophila melanogaster CG33155-PC,
           isoform C protein.
          Length = 60

 Score = 82.2 bits (194), Expect = 1e-15
 Identities = 37/56 (66%), Positives = 48/56 (85%)
 Frame = +2

Query: 539 KPKGNLDVIEEIYRQIPAFTDVFSEDTFYVFVTFFVLSTILVAFVLSRFITIKPVE 706
           K KG L VIE+IY+ IPAF+D+F+E++FY+F   FV +TILVAF+LSRFITIKPV+
Sbjct: 4   KHKGTLAVIEKIYQDIPAFSDIFTEESFYMFAFCFVCATILVAFILSRFITIKPVD 59


>AE013599-1798|AAO41393.1|   60|Drosophila melanogaster CG33155-PA,
           isoform A protein.
          Length = 60

 Score = 82.2 bits (194), Expect = 1e-15
 Identities = 37/56 (66%), Positives = 48/56 (85%)
 Frame = +2

Query: 539 KPKGNLDVIEEIYRQIPAFTDVFSEDTFYVFVTFFVLSTILVAFVLSRFITIKPVE 706
           K KG L VIE+IY+ IPAF+D+F+E++FY+F   FV +TILVAF+LSRFITIKPV+
Sbjct: 4   KHKGTLAVIEKIYQDIPAFSDIFTEESFYMFAFCFVCATILVAFILSRFITIKPVD 59


>AY071383-1|AAL49005.1|  409|Drosophila melanogaster RE42228p
           protein.
          Length = 409

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 178 LXKKLP*NLIHLEKTQLTQGILLITSVHLK*QSQIPIAL*RPKCCVTGVSQ 330
           +  K+P NL H+E  ++ Q I L+T   L    ++P ++    CC   ++Q
Sbjct: 12  IYNKMPKNLFHIENEKMLQDINLVTGTALHNDPELPSSI--CACCTLDLNQ 60


>AE014297-1338|AAG22145.1|  409|Drosophila melanogaster CG18764-PA
           protein.
          Length = 409

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 178 LXKKLP*NLIHLEKTQLTQGILLITSVHLK*QSQIPIAL*RPKCCVTGVSQ 330
           +  K+P NL H+E  ++ Q I L+T   L    ++P ++    CC   ++Q
Sbjct: 12  IYNKMPKNLFHIENEKMLQDINLVTGTTLHNDPELPSSI--CACCTLDLNQ 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,324,222
Number of Sequences: 53049
Number of extensions: 625399
Number of successful extensions: 1541
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)