Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_J20
(1315 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 37 0.036
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 36 0.048
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.26
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.26
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.26
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.26
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.26
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.59
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 3.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 3.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 3.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 9.6
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 36.7 bits (81), Expect = 0.036
Identities = 32/130 (24%), Positives = 38/130 (29%), Gaps = 7/130 (5%)
Frame = -2
Query: 735 LXPPGVXPPXXXAPXXXXXXXXXXXLXXPXXXPLXXXXPXXXPXLXXFFXXXPPLFXGXP 556
+ PP + PP P L P P P + PP G P
Sbjct: 659 IPPPNIQPPVPHPPPMGFPFQHQ--LTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYP 716
Query: 555 XXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXE-------PPXPXGGGFFXXXKXXPPPP 397
PP G P PPQ + F P + PP P G G PPP
Sbjct: 717 PAPPPPGVGPPPPQ-GIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPR 775
Query: 396 PXXXKIKKPP 367
+ PP
Sbjct: 776 GGMHHMPPPP 785
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 36.3 bits (80), Expect = 0.048
Identities = 39/139 (28%), Positives = 39/139 (28%), Gaps = 6/139 (4%)
Frame = -1
Query: 904 PPFXXGXXPPFFXXPPX--FFXKXPPXPX-GKXXXXFXXXPLFXKXXXPGXFXGXXPXFF 734
PP PP F PP F PP P G P P G P F
Sbjct: 34 PPIVIAGPPPCFDCPPPAPIFVAPPPPPCFGPACPPPCFGPACVPLA-PIIVNGPPPCF- 91
Query: 733 XXPRGXPPPXXGPLXXXXF---WGGXPXXXXPXXXPFXXXXPFXXXFKXFFFXGXPPFXG 563
P PPP GP G P P P P G PP G
Sbjct: 92 -GP-ACPPPCFGPACAPPAPIIVNGPPPCFGPACPP-PCFGPACAPSAPIIVNGPPPCFG 148
Query: 562 XXXXPPXXGXXPXPPPNIP 506
PP G PPP P
Sbjct: 149 PACPPPCFGPACAPPPPAP 167
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.26
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 550 PPXXGXXPXPPPNIPXXGFFWXXXXXXPXXXTPXXPGGGXFFXXKKXPPPPP 395
PP G P PPP P W P TP PG PPPPP
Sbjct: 278 PPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPG-----MPGMPPPPPP 322
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.26
Identities = 26/91 (28%), Positives = 28/91 (30%)
Frame = -2
Query: 579 PPLFXGXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPPP 400
PP+ G P PP G P G PP P GG PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPP 775
Query: 399 PPXXXKIKKPPXXXXXXFSPXXXFXXTQTPP 307
PP K PP F+P PP
Sbjct: 776 PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 31.5 bits (68), Expect = 1.4
Identities = 31/107 (28%), Positives = 32/107 (29%), Gaps = 2/107 (1%)
Frame = -1
Query: 721 GXPPPXXGPLXXXXFWGGXPXXXXPXXXPFXXXXPFXXXFKXFFFXGXPPFXGXXXXPPX 542
G PPP G GG P P P P G PP G PP
Sbjct: 711 GGPPPPPG---LPPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPPPPPP 763
Query: 541 X-GXXPXPPPNIPXXGF-FWXXXXXXPXXXTPXXPGGGXFFXXKKXP 407
G P PPP P GF P P P + KK P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = -2
Query: 579 PPLFXGXPXXP---PXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXX 409
PP+ G P P P G P PP G PP P GG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP--------PPPPPPGGLPPISGGP 758
Query: 408 PPPPPXXXKIKKPP 367
PPPPP PP
Sbjct: 759 PPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.26
Identities = 26/91 (28%), Positives = 28/91 (30%)
Frame = -2
Query: 579 PPLFXGXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPPP 400
PP+ G P PP G P G PP P GG PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPP 775
Query: 399 PPXXXKIKKPPXXXXXXFSPXXXFXXTQTPP 307
PP K PP F+P PP
Sbjct: 776 PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 31.5 bits (68), Expect = 1.4
Identities = 31/107 (28%), Positives = 32/107 (29%), Gaps = 2/107 (1%)
Frame = -1
Query: 721 GXPPPXXGPLXXXXFWGGXPXXXXPXXXPFXXXXPFXXXFKXFFFXGXPPFXGXXXXPPX 542
G PPP G GG P P P P G PP G PP
Sbjct: 711 GGPPPPPG---LPPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPPPPPP 763
Query: 541 X-GXXPXPPPNIPXXGF-FWXXXXXXPXXXTPXXPGGGXFFXXKKXP 407
G P PPP P GF P P P + KK P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = -2
Query: 579 PPLFXGXPXXP---PXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXX 409
PP+ G P P P G P PP G PP P GG
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP--------PPPPPPGGLPPISGGP 758
Query: 408 PPPPPXXXKIKKPP 367
PPPPP PP
Sbjct: 759 PPPPPPPGGCPPPP 772
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.26
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 550 PPXXGXXPXPPPNIPXXGFFWXXXXXXPXXXTPXXPGGGXFFXXKKXPPPPP 395
PP G P PPP P W P TP PG PPPPP
Sbjct: 288 PPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPPG-----MPGMPPPPPP 332
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.26
Identities = 26/91 (28%), Positives = 28/91 (30%)
Frame = -2
Query: 579 PPLFXGXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPPP 400
PP+ G P PP G P G PP P GG PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPP 358
Query: 399 PPXXXKIKKPPXXXXXXFSPXXXFXXTQTPP 307
PP K PP F+P PP
Sbjct: 359 PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
Score = 31.5 bits (68), Expect = 1.4
Identities = 31/107 (28%), Positives = 32/107 (29%), Gaps = 2/107 (1%)
Frame = -1
Query: 721 GXPPPXXGPLXXXXFWGGXPXXXXPXXXPFXXXXPFXXXFKXFFFXGXPPFXGXXXXPPX 542
G PPP G GG P P P P G PP G PP
Sbjct: 294 GGPPPPPG---LPPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPPPPPP 346
Query: 541 X-GXXPXPPPNIPXXGF-FWXXXXXXPXXXTPXXPGGGXFFXXKKXP 407
G P PPP P GF P P P + KK P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = -2
Query: 579 PPLFXGXPXXP---PXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXX 409
PP+ G P P P G P PP G PP P GG
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP--------PPPPPPGGLPPISGGP 341
Query: 408 PPPPPXXXKIKKPP 367
PPPPP PP
Sbjct: 342 PPPPPPPGGCPPPP 355
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.59
Identities = 18/71 (25%), Positives = 20/71 (28%)
Frame = -2
Query: 729 PPGVXPPXXXAPXXXXXXXXXXXLXXPXXXPLXXXXPXXXPXLXXFFXXXPPLFXGXPXX 550
P G+ PP P P P P PP+ G P
Sbjct: 48 PSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Query: 549 PPXXGKXPXPP 517
PP G P PP
Sbjct: 108 PPMFGAPPPPP 118
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/95 (27%), Positives = 30/95 (31%)
Frame = -2
Query: 591 FXXXPPLFXGXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKX 412
F PP+ G PP G P PP +F + PP P GG
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGI------------PPPPPMMGGI------ 104
Query: 411 XPPPPPXXXKIKKPPXXXXXXFSPXXXFXXTQTPP 307
PPPPP PP +P T P
Sbjct: 105 -PPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNP 138
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 579 PPLFX-GXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPP 403
PPL G P PP G P PP+ P PP P GG + P
Sbjct: 247 PPLAGSGSPPPPPAAGSPP-PPRT--------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 402 PPPXXXKIKKP 370
PPP + P
Sbjct: 298 PPPPPPRGSPP 308
Score = 30.3 bits (65), Expect = 3.2
Identities = 26/91 (28%), Positives = 29/91 (31%)
Frame = -2
Query: 579 PPLFXGXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPPP 400
PP G P PP G P PP+ P P P GG PP
Sbjct: 273 PPPPTGSPPPPPAGGSPP-PPRAGSPPPP-PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Query: 399 PPXXXKIKKPPXXXXXXFSPXXXFXXTQTPP 307
PP K ++ P SP T PP
Sbjct: 331 PPPRQK-RQAPERSPPTGSPPTGSPPTGRPP 360
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -1
Query: 583 GXPPFXGXXXXPPXXGXXPXPPPNIPXXGFFWXXXXXXPXXXTPXXPGGGXFFXXKKXPP 404
G PP G PP PPP P P P GG + P
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRT-------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 403 PPP 395
PPP
Sbjct: 298 PPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 579 PPLFX-GXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPP 403
PPL G P PP G P PP+ P PP P GG + P
Sbjct: 268 PPLAGSGSPPPPPAAGSPP-PPRT--------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 402 PPPXXXKIKKP 370
PPP + P
Sbjct: 319 PPPPPPRGSPP 329
Score = 30.3 bits (65), Expect = 3.2
Identities = 26/91 (28%), Positives = 29/91 (31%)
Frame = -2
Query: 579 PPLFXGXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPPP 400
PP G P PP G P PP+ P P P GG PP
Sbjct: 294 PPPPTGSPPPPPAGGSPP-PPRAGSPPPP-PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Query: 399 PPXXXKIKKPPXXXXXXFSPXXXFXXTQTPP 307
PP K ++ P SP T PP
Sbjct: 352 PPPRQK-RQAPERSPPTGSPPTGSPPTGRPP 381
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -1
Query: 583 GXPPFXGXXXXPPXXGXXPXPPPNIPXXGFFWXXXXXXPXXXTPXXPGGGXFFXXKKXPP 404
G PP G PP PPP P P P GG + P
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRT-------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 403 PPP 395
PPP
Sbjct: 319 PPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 3.2
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = -2
Query: 579 PPLFX-GXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPP 403
PPL G P PP G P PP+ P PP P GG + P
Sbjct: 253 PPLAGSGSPPPPPAAGSPP-PPRT--------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 402 PPPXXXKIKKP 370
PPP + P
Sbjct: 304 PPPPPPRGSPP 314
Score = 30.3 bits (65), Expect = 3.2
Identities = 26/91 (28%), Positives = 29/91 (31%)
Frame = -2
Query: 579 PPLFXGXPXXPPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPPP 400
PP G P PP G P PP+ P P P GG PP
Sbjct: 279 PPPPTGSPPPPPAGGSPP-PPRAGSPPPP-PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Query: 399 PPXXXKIKKPPXXXXXXFSPXXXFXXTQTPP 307
PP K ++ P SP T PP
Sbjct: 337 PPPRQK-RQAPERSPPTGSPPTGSPPTGRPP 366
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -1
Query: 583 GXPPFXGXXXXPPXXGXXPXPPPNIPXXGFFWXXXXXXPXXXTPXXPGGGXFFXXKKXPP 404
G PP G PP PPP P P P GG + P
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRT-------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 403 PPP 395
PPP
Sbjct: 304 PPP 306
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -2
Query: 549 PPXXGKXPXPPQIFXXXVFFGXXXXXXPXXEPPXPXGGGFFXXXKXXPPPPPXXXKIKKP 370
PP P PP I G P PP P PPPPP + P
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQN-----LSGAPPPPPPPPPMLGGP 589
Query: 369 P 367
P
Sbjct: 590 P 590
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 468 PXXEPPXPXGGGFFXXXKXXPPPPP 394
P PP P GGG+ + PPPPP
Sbjct: 39 PPPPPPPPCGGGY----EAPPPPPP 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.154 0.508
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,065,409
Number of Sequences: 27780
Number of extensions: 403831
Number of successful extensions: 1553
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3673557334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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