Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_J15
         (1316 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...    78   2e-14
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...    78   2e-14
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...    78   2e-14
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...    75   2e-13

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = +3

Query: 165 VQRGLVGTLLERXEKSGIKXXGXQFVWPSVITXXINXXSDVASRPFFXGLVKYMSSGPVV 344
           VQRGLVG ++ER E+ G K    +F W S         +D+++RPFF GLV YM+SGPVV
Sbjct: 17  VQRGLVGKIIERFEQKGFKLVALKFTWASKELLE-KHYADLSARPFFPGLVNYMNSGPVV 75

Query: 345 XMVWXGLXVXXXGR 386
            MVW GL V   GR
Sbjct: 76  PMVWEGLNVVKTGR 89



 Score = 38.3 bits (85), Expect = 0.023
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = +1

Query: 400 ATNXAXSQXXXMRRDLCIXXXRXIXXGXXXVDSGXXEIXLWXTXXKXVGGTP 555
           ATN A S    +R D CI   R I  G   V+S   EI LW    + V  TP
Sbjct: 94  ATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTP 145


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = +3

Query: 165 VQRGLVGTLLERXEKSGIKXXGXQFVWPSVITXXINXXSDVASRPFFXGLVKYMSSGPVV 344
           VQRGLVG ++ER E+ G K    +F W S         +D+++RPFF GLV YM+SGPVV
Sbjct: 17  VQRGLVGKIIERFEQKGFKLVALKFTWASKELLE-KHYADLSARPFFPGLVNYMNSGPVV 75

Query: 345 XMVWXGLXVXXXGR 386
            MVW GL V   GR
Sbjct: 76  PMVWEGLNVVKTGR 89



 Score = 38.3 bits (85), Expect = 0.023
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = +1

Query: 400 ATNXAXSQXXXMRRDLCIXXXRXIXXGXXXVDSGXXEIXLWXTXXKXVGGTP 555
           ATN A S    +R D CI   R I  G   V+S   EI LW    + V  TP
Sbjct: 94  ATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTP 145


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score = 78.2 bits (184), Expect = 2e-14
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = +3

Query: 165 VQRGLVGTLLERXEKSGIKXXGXQFVWPSVITXXINXXSDVASRPFFXGLVKYMSSGPVV 344
           VQRGLVG ++ER E+ G K    +F W S         +D+++RPFF GLV YM+SGPVV
Sbjct: 36  VQRGLVGKIIERFEQKGFKLVALKFTWASKELLE-KHYADLSARPFFPGLVNYMNSGPVV 94

Query: 345 XMVWXGLXVXXXGR 386
            MVW GL V   GR
Sbjct: 95  PMVWEGLNVVKTGR 108



 Score = 38.3 bits (85), Expect = 0.023
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = +1

Query: 400 ATNXAXSQXXXMRRDLCIXXXRXIXXGXXXVDSGXXEIXLWXTXXKXVGGTP 555
           ATN A S    +R D CI   R I  G   V+S   EI LW    + V  TP
Sbjct: 113 ATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTP 164


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score = 74.9 bits (176), Expect = 2e-13
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = +3

Query: 165 VQRGLVGTLLERXEKSGIKXXGXQFVWPSVITXXINXXSDVASRPFFXGLVKYMSSGPVV 344
           VQRGLVG ++ER E+ G K    +F W S         +D+++RPFF GLV YM+SGPVV
Sbjct: 16  VQRGLVGKIIERFEQKGFKLVALKFTWASKELLE-KHYADLSARPFFPGLVNYMNSGPVV 74

Query: 345 XMVWXGLXV 371
            MVW GL V
Sbjct: 75  PMVWEGLNV 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,622,281
Number of Sequences: 53049
Number of extensions: 127176
Number of successful extensions: 112
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7150959855
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)