Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_J12
(1399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 35 0.81
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 35 0.81
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 35 0.81
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 35 0.81
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 34 1.1
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 34 1.1
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 33 3.3
AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens ... 32 4.3
AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens ... 32 4.3
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 32 5.7
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 32 5.7
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 32 5.7
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 32 5.7
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 32 5.7
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 32 5.7
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 31 7.6
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member 2
protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.81
Identities = 29/101 (28%), Positives = 30/101 (29%), Gaps = 2/101 (1%)
Frame = -3
Query: 1376 PXPPXXFXXAXXPFXXNPXPXXXXPXGXXPXXXPPXFFFXFXXNKFXXKXKXPPPXXXDX 1197
P PP P P P G P PP F F PPP D
Sbjct: 323 PPPPPPMIGIPPP----PPPVGFGSPGTPPPPSPPSFP---PHPDFAAPPPPPPPPAADY 375
Query: 1196 XXLXTPXXSPRTXXXXXXPPPPXX--FXXPPXXGAPXXPXV 1080
L P S T PPPP PP GA P +
Sbjct: 376 PTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAI 416
Score = 34.3 bits (75), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 1206 GXXXXFXNPPXFPPNXXXXXGXPPPXPFFXXXXXGGPPXPKXFXXFPXXPRF 1051
G F PP PP G PPP P G PP P FP P F
Sbjct: 311 GPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSP-PSFPPHPDF 361
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member 2
protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.81
Identities = 29/101 (28%), Positives = 30/101 (29%), Gaps = 2/101 (1%)
Frame = -3
Query: 1376 PXPPXXFXXAXXPFXXNPXPXXXXPXGXXPXXXPPXFFFXFXXNKFXXKXKXPPPXXXDX 1197
P PP P P P G P PP F F PPP D
Sbjct: 323 PPPPPPMIGIPPP----PPPVGFGSPGTPPPPSPPSFP---PHPDFAAPPPPPPPPAADY 375
Query: 1196 XXLXTPXXSPRTXXXXXXPPPPXX--FXXPPXXGAPXXPXV 1080
L P S T PPPP PP GA P +
Sbjct: 376 PTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAI 416
Score = 34.3 bits (75), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 1206 GXXXXFXNPPXFPPNXXXXXGXPPPXPFFXXXXXGGPPXPKXFXXFPXXPRF 1051
G F PP PP G PPP P G PP P FP P F
Sbjct: 311 GPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSP-PSFPPHPDF 361
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens cDNA
FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 34.7 bits (76), Expect = 0.81
Identities = 25/83 (30%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Frame = -3
Query: 1325 PXPXXXXPXGXXPXXXPPXFFFXFXXNKFXXKXKXPPPXXXDXXXLXTPXXSPRTXXXXX 1146
P P G P PP F F PPP D L P S T
Sbjct: 8 PPPVGFGSPGTPPPPSPPSFP---PHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPP 64
Query: 1145 XPPPPXXF-XXPPXXGAPXXPXV 1080
PPPP PP GA P +
Sbjct: 65 PPPPPPPGPPPPPFTGADGQPAI 87
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.81
Identities = 29/101 (28%), Positives = 30/101 (29%), Gaps = 2/101 (1%)
Frame = -3
Query: 1376 PXPPXXFXXAXXPFXXNPXPXXXXPXGXXPXXXPPXFFFXFXXNKFXXKXKXPPPXXXDX 1197
P PP P P P G P PP F F PPP D
Sbjct: 323 PPPPPPMIGIPPP----PPPVGFGSPGTPPPPSPPSFP---PHPDFAAPPPPPPPPAADY 375
Query: 1196 XXLXTPXXSPRTXXXXXXPPPPXX--FXXPPXXGAPXXPXV 1080
L P S T PPPP PP GA P +
Sbjct: 376 PTLPPPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAI 416
Score = 34.3 bits (75), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 1206 GXXXXFXNPPXFPPNXXXXXGXPPPXPFFXXXXXGGPPXPKXFXXFPXXPRF 1051
G F PP PP G PPP P G PP P FP P F
Sbjct: 311 GPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSP-PSFPPHPDF 361
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 34.3 bits (75), Expect = 1.1
Identities = 29/110 (26%), Positives = 30/110 (27%)
Frame = -1
Query: 1192 FXKPPXXPPEPXXXXGXPPPPXXFXXXPXRGPPXXQXFXXFPXXTPFFXXPXXXXXXPTX 1013
F PP PP P G PPPP PP FP P F P P
Sbjct: 444 FAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSS-PSFPPH-PDFAAPPPLPPPPAA 501
Query: 1012 QXVFFXSGXPLXPXXXXXPXPXXXXXGGXXXXPPPXXXGQVKPIXXHKLS 863
P P P G PPP +P LS
Sbjct: 502 DYPTLPPPPLSQPTRGAPPPPPPPPPG---PPPPPFTGADGQPAVPPPLS 548
Score = 33.5 bits (73), Expect = 1.9
Identities = 29/99 (29%), Positives = 30/99 (30%), Gaps = 2/99 (2%)
Frame = -3
Query: 1370 PPXXFXXAXXPFXXNPXPXXXXPXGXXPXXXPPXFFFXFXXNK-FXXKXKXPPPXXXDXX 1194
PP P P P G P PP F + F PPP D
Sbjct: 446 PPPAPPPPPPPMIGIPPPPPPIGFGS-PGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYP 504
Query: 1193 XLXTPXXSPRTXXXXXXPPPPXXF-XXPPXXGAPXXPXV 1080
L P S T PPPP PP GA P V
Sbjct: 505 TLPPPPLSQPTRGAPPPPPPPPPGPPPPPFTGADGQPAV 543
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 34.3 bits (75), Expect = 1.1
Identities = 29/110 (26%), Positives = 30/110 (27%)
Frame = -1
Query: 1192 FXKPPXXPPEPXXXXGXPPPPXXFXXXPXRGPPXXQXFXXFPXXTPFFXXPXXXXXXPTX 1013
F PP PP P G PPPP PP FP P F P P
Sbjct: 315 FAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSS-PSFPPH-PDFAAPPPLPPPPAA 372
Query: 1012 QXVFFXSGXPLXPXXXXXPXPXXXXXGGXXXXPPPXXXGQVKPIXXHKLS 863
P P P G PPP +P LS
Sbjct: 373 DYPTLPPPPLSQPTRGAPPPPPPPPPG---PPPPPFTGADGQPAVPPPLS 419
Score = 33.5 bits (73), Expect = 1.9
Identities = 29/99 (29%), Positives = 30/99 (30%), Gaps = 2/99 (2%)
Frame = -3
Query: 1370 PPXXFXXAXXPFXXNPXPXXXXPXGXXPXXXPPXFFFXFXXNK-FXXKXKXPPPXXXDXX 1194
PP P P P G P PP F + F PPP D
Sbjct: 317 PPPAPPPPPPPMIGIPPPPPPIGFGS-PGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYP 375
Query: 1193 XLXTPXXSPRTXXXXXXPPPPXXF-XXPPXXGAPXXPXV 1080
L P S T PPPP PP GA P V
Sbjct: 376 TLPPPPLSQPTRGAPPPPPPPPPGPPPPPFTGADGQPAV 414
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 32.7 bits (71), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 1186 KPPXXPPEPXXXXGXPPPPXXFXXXPXRGPP 1094
+PP PP P G PPPP P GPP
Sbjct: 275 RPPLGPPGPPGPPG-PPPPGQVLPPPLAGPP 304
Score = 31.9 bits (69), Expect = 5.7
Identities = 28/97 (28%), Positives = 31/97 (31%), Gaps = 3/97 (3%)
Frame = -1
Query: 1375 PPPXXFSXXPXXPXKXTPXPXXXXPX-GXXPXXPXPXFFFXFXXTNXXXKXXPXPXXXXI 1199
PP P P + P P P G P P P F P +
Sbjct: 280 PPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP--PPPVLFPGQPFGQPPLGPLPPGPPPPV 337
Query: 1198 XXFXKPPXXPPEPXXXXGXPPPPXXFXXXP--XRGPP 1094
+ PP PP P G PPPP F P GPP
Sbjct: 338 PGYGPPPG-PPPP--QQGPPPPPGPFPPRPPGPLGPP 371
>AK127057-1|BAC86806.1| 752|Homo sapiens protein ( Homo sapiens cDNA
FLJ45114 fis, clone BRAWH3034775, highly similar to Homo
sapiens E1B-55kDa-associated protein 5 (E1B-AP5). ).
Length = 752
Score = 32.3 bits (70), Expect = 4.3
Identities = 25/95 (26%), Positives = 28/95 (29%), Gaps = 3/95 (3%)
Frame = -1
Query: 1183 PPXXPPEPXXXXGXPPPPXXFXXXPXRGPPXXQXF---XXFPXXTPFFXXPXXXXXXPTX 1013
PP PP P PPPP + P R PP + P + P P
Sbjct: 583 PPQQPPPPQPPPQQPPPPPSY--SPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ 640
Query: 1012 QXVFFXSGXPLXPXXXXXPXPXXXXXGGXXXXPPP 908
FF S P P G PPP
Sbjct: 641 SFGFFPS--TFQPSYSQPPYNQGGYSQGYTAPPPP 673
>AK021455-1|BAB13831.1| 390|Homo sapiens protein ( Homo sapiens cDNA
FLJ11393 fis, clone HEMBA1000591, weakly similar to
PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 390
Score = 32.3 bits (70), Expect = 4.3
Identities = 25/95 (26%), Positives = 28/95 (29%), Gaps = 3/95 (3%)
Frame = -1
Query: 1183 PPXXPPEPXXXXGXPPPPXXFXXXPXRGPPXXQXF---XXFPXXTPFFXXPXXXXXXPTX 1013
PP PP P PPPP + P R PP + P + P P
Sbjct: 221 PPQQPPPPQPPPQQPPPPPSY--SPARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQ 278
Query: 1012 QXVFFXSGXPLXPXXXXXPXPXXXXXGGXXXXPPP 908
FF S P P G PPP
Sbjct: 279 SFGFFPS--TFQPSYSQPPYNQGGYSQGYTAPPPP 311
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage factor
I 68 kDa subunit protein.
Length = 551
Score = 31.9 bits (69), Expect = 5.7
Identities = 28/97 (28%), Positives = 31/97 (31%), Gaps = 3/97 (3%)
Frame = -1
Query: 1375 PPPXXFSXXPXXPXKXTPXPXXXXPX-GXXPXXPXPXFFFXFXXTNXXXKXXPXPXXXXI 1199
PP P P + P P P G P P P F P +
Sbjct: 243 PPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP--PPPVLFPGQPFGQPPLGPLPPGPPPPV 300
Query: 1198 XXFXKPPXXPPEPXXXXGXPPPPXXFXXXP--XRGPP 1094
+ PP PP P G PPPP F P GPP
Sbjct: 301 PGYGPPPG-PPPP--QQGPPPPPGPFPPRPPGPLGPP 334
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.9 bits (69), Expect = 5.7
Identities = 28/97 (28%), Positives = 31/97 (31%), Gaps = 3/97 (3%)
Frame = -1
Query: 1375 PPPXXFSXXPXXPXKXTPXPXXXXPX-GXXPXXPXPXFFFXFXXTNXXXKXXPXPXXXXI 1199
PP P P + P P P G P P P F P +
Sbjct: 243 PPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP--PPPVLFPGQPFGQPPLGPLPPGPPPPV 300
Query: 1198 XXFXKPPXXPPEPXXXXGXPPPPXXFXXXP--XRGPP 1094
+ PP PP P G PPPP F P GPP
Sbjct: 301 PGYGPPPG-PPPP--QQGPPPPPGPFPPRPPGPLGPP 334
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 31.9 bits (69), Expect = 5.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 1222 PXPXXXXIXXFXKPPXXPPEPXXXXGXPPPPXXFXXXPXRGPP 1094
P P PP PP P G PPP P GPP
Sbjct: 156 PPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPP 198
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 31.9 bits (69), Expect = 5.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 1222 PXPXXXXIXXFXKPPXXPPEPXXXXGXPPPPXXFXXXPXRGPP 1094
P P PP PP P G PPP P GPP
Sbjct: 574 PPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPP 616
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenylation
specific factor 6, 68 kD subunit variant protein.
Length = 551
Score = 31.9 bits (69), Expect = 5.7
Identities = 28/97 (28%), Positives = 31/97 (31%), Gaps = 3/97 (3%)
Frame = -1
Query: 1375 PPPXXFSXXPXXPXKXTPXPXXXXPX-GXXPXXPXPXFFFXFXXTNXXXKXXPXPXXXXI 1199
PP P P + P P P G P P P F P +
Sbjct: 243 PPGPPGPPGPPPPGQVLPPPLAGPPNRGDRP--PPPVLFPGQPFGQPPLGPLPPGPPPPV 300
Query: 1198 XXFXKPPXXPPEPXXXXGXPPPPXXFXXXP--XRGPP 1094
+ PP PP P G PPPP F P GPP
Sbjct: 301 PGYGPPPG-PPPP--QQGPPPPPGPFPPRPPGPLGPP 334
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen KW-13
protein.
Length = 991
Score = 31.9 bits (69), Expect = 5.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 1222 PXPXXXXIXXFXKPPXXPPEPXXXXGXPPPPXXFXXXPXRGPP 1094
P P PP PP P G PPP P GPP
Sbjct: 465 PPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPP 507
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens cDNA
FLJ39651 fis, clone SMINT2005161, highly similar to Mus
musculus ES18 mRNA. ).
Length = 485
Score = 31.5 bits (68), Expect = 7.6
Identities = 27/105 (25%), Positives = 31/105 (29%), Gaps = 9/105 (8%)
Frame = -1
Query: 1183 PPXXPPEPXXXXGXPPPPXXFXXXPXRGPPXXQXFXXFPXXT-PFFXXPXXXXXXPTXQ- 1010
PP P P G PPPP P PP Q FP + PF P + +
Sbjct: 14 PPPPQPPPPAPFGCPPPPLPSPAFP---PPLPQRPGPFPGASAPFLQPPLALQPRASAEA 70
Query: 1009 -------XVFFXSGXPLXPXXXXXPXPXXXXXGGXXXXPPPXXXG 896
F+ P P P G PPP G
Sbjct: 71 SRGGGGAGAFYPVPPPPLPPPPPQCRPFPGTDAGERPRPPPPGPG 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,173,436
Number of Sequences: 237096
Number of extensions: 2323034
Number of successful extensions: 7638
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5903
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20388997848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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