Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_J11
(1245 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 217 1e-56
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 217 1e-56
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 217 1e-56
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 217 1e-56
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 202 5e-52
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 202 5e-52
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 86 4e-17
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 86 4e-17
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.32
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.73
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.73
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 32 0.97
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 31 1.7
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 31 1.7
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 5.2
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 29 6.8
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 6.8
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 9.0
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 9.0
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 9.0
AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical ... 29 9.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 9.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 9.0
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 217 bits (530), Expect = 1e-56
Identities = 108/146 (73%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Frame = +2
Query: 140 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 319
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 320 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 496
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 497 LFVGMILILIFAEVLGLYGLIVAIYL 574
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 217 bits (530), Expect = 1e-56
Identities = 108/146 (73%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Frame = +2
Query: 140 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 319
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 320 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 496
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 497 LFVGMILILIFAEVLGLYGLIVAIYL 574
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 217 bits (530), Expect = 1e-56
Identities = 108/146 (73%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Frame = +2
Query: 140 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 319
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 320 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 496
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 497 LFVGMILILIFAEVLGLYGLIVAIYL 574
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 217 bits (530), Expect = 1e-56
Identities = 108/146 (73%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Frame = +2
Query: 140 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 319
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 320 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPR 496
LVVA+++ G + A Y L KGF HL AGL G GL AG+AIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 497 LFVGMILILIFAEVLGLYGLIVAIYL 574
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 202 bits (492), Expect = 5e-52
Identities = 96/147 (65%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Frame = +2
Query: 137 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 316
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 317 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 493
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 494 RLFVGMILILIFAEVLGLYGLIVAIYL 574
R+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 202 bits (492), Expect = 5e-52
Identities = 96/147 (65%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Frame = +2
Query: 137 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 316
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 317 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQP 493
GLVVAV+++G ++ ANY + F GL G GL AG+AIGI GDAGVR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 494 RLFVGMILILIFAEVLGLYGLIVAIYL 574
R+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 86.2 bits (204), Expect = 4e-17
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Frame = +2
Query: 161 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 340
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 341 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 478
G L E + P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 479 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 568
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 392 HLGAGLAVGF----SGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 559
H+ AGL +GF S L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 560 VA 565
+A
Sbjct: 109 MA 110
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 86.2 bits (204), Expect = 4e-17
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Frame = +2
Query: 161 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 340
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 341 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 478
G L E + P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 479 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 568
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 392 HLGAGLAVGF----SGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 559
H+ AGL +GF S L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 560 VA 565
+A
Sbjct: 109 MA 110
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.32
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 274 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 357
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 373 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 275
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 373 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 275
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 31.9 bits (69), Expect = 0.97
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 574 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGETGSQTRE 419
++DG++ K + K KNH+D P LL ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 574 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 440
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 574 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 440
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 729 TRVEGCSETLCKVDPLPATTIPVRVFRLR 643
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 729 TRVEGCSETLCKVDPLPATTIPVRVFRLR 643
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 729 TRVEGCSETLCKVDPLPATTIPVRVFRLR 643
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 729 TRVEGCSETLCKVDPLPATTIPVRVFRLR 643
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3603 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3631
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 729 TRVEGCSETLCKVDPLPATTIPVRVFRLR 643
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 729 TRVEGCSETLCKVDPLPATTIPVRVFRLR 643
TRV SE +VD +PA + PV+ FRLR
Sbjct: 3592 TRVASSSEEPEEVDVIPAESTPVKPFRLR 3620
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 474 RTPASPTMPMAKPAARPENPTAKPAPK 394
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 474 RTPASPTMPMAKPAARPENPTAKPAPK 394
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 665 GMVVAGSGSTLHRVSEHPSTLVYYICSLL 751
G++V GS S L++ +++ +V Y CSLL
Sbjct: 223 GVIVLGSNSVLYKPNDNLGEVVPYTCSLL 251
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 546 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 403
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 546 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 403
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 304 YCHLRSGRGCPDCWCPPGASQ 366
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 480 VPRTPASPTMPMAKPAARPENPTAKPAPK 394
VP P PT P +P RPE P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 286 CRHGGYYCHLRSGRGCPDCWCPPGASQ 366
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical
protein Y15E3A.4 protein.
Length = 469
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 132 LFSAILFVKCGSIYRSPKTVMTICTHS 52
+ S I F+KC S++ P V IC+H+
Sbjct: 385 VLSQIQFIKCLSLFIEPLLVFLICSHN 411
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 304 YCHLRSGRGCPDCWCPPGASQ 366
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 9.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 304 YCHLRSGRGCPDCWCPPGASQ 366
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,861,897
Number of Sequences: 27780
Number of extensions: 593176
Number of successful extensions: 1887
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1857
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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