Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_J10
(1310 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34801-4|CAA84328.1| 236|Caenorhabditis elegans Hypothetical pr... 75 1e-13
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 33 0.59
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 32 1.0
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 31 1.4
U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical p... 30 3.1
U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical p... 30 3.1
AL590342-5|CAC35862.1| 507|Caenorhabditis elegans Hypothetical ... 30 3.1
AL032627-24|CAA21552.1| 507|Caenorhabditis elegans Hypothetical... 30 3.1
AL032622-8|CAA21503.1| 507|Caenorhabditis elegans Y66A7A.8 prot... 30 3.1
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 9.6
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 9.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 9.6
AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical... 29 9.6
>Z34801-4|CAA84328.1| 236|Caenorhabditis elegans Hypothetical
protein F59A2.3 protein.
Length = 236
Score = 74.9 bits (176), Expect = 1e-13
Identities = 63/199 (31%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Frame = +1
Query: 373 ELVEFLTEEIVAERKAQKVK---SLPAEVEGFTVKGDGAEVVLTKQLKDETIRVTFNVNH 543
EL + L EI AE++ ++ GF V AEV LTK+ E I V FNVNH
Sbjct: 41 ELQQALNREIEAEQQLSSDNLQGAVAPTFAGFQVTNKDAEVRLTKKNGSEDILVVFNVNH 100
Query: 544 TVDSDDFEGDVQTEKQEFSEMR-SKPQFEVDLVRGDTTLGFTCSYLQDPPAASADEYNDV 720
+VD D EG Q + + + P F V++ +GD L F + P DEY+
Sbjct: 101 SVDMD--EGFDDEPSQAVAPVPVAMPPFTVEITKGDQRLCFHLELV--PVDDQPDEYD-- 154
Query: 721 FGIDEITLYKGEWN------DKVYAVA-XXXXXXXXXXXXMNLLEEKGISNEFVQKLSDF 879
F ++E + N +VYA + + LEE+G+ F + L +
Sbjct: 155 FRVEEFYVAPSAKNGNEDVPSEVYASSGKYIDPDLHDLLFVRYLEERGLDARFCKTLVAY 214
Query: 880 STAYEHTAYINLLESISKF 936
+T YEH+ Y+ LL+ I KF
Sbjct: 215 ATHYEHSQYVGLLDKIKKF 233
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 32.7 bits (71), Expect = 0.59
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -3
Query: 417 FAFSNYFFCQELYQFSFTFRVKRLQPAAAAASIGMVV*QAGGSQGPI*P--SRAAHVPYT 244
F +Y + Q+L + + ++ Q AAAAA+ G QGP P S++ +P
Sbjct: 336 FQSDHYRYSQQLQHVQWQQQQQQQQAAAAAAAAAAAASAGGHHQGPPPPTSSQSNQIPSN 395
Query: 243 PSKVAFH 223
P+ V H
Sbjct: 396 PNSVPVH 402
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 31.9 bits (69), Expect = 1.0
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +1
Query: 391 TEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETIR-VTFNVNHTVDSDDFE 567
T+EI + A K++ +E V+ E + Q E++R ++ NV H VD+D F+
Sbjct: 32 TKEIERLKAAHKMQVDALNIELTAVQNVLKEKSIINQSLTESLRNISANVRHRVDADSFK 91
Query: 568 GDVQTEKQEFSEMRSKPQFEVDLVRGDTTLGFTCSYLQDPPAASADEYNDVFGIDE 735
+++ E E +R + + V+ F SY + N + +DE
Sbjct: 92 IELKREAMEKFHIRVELLAQCAKVKELERDKFQLSYQMQELRTIGEHQNLIKMVDE 147
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 340 GLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTVKGDGAEVVLTKQLKDETI 519
G K K REL + I AE+K +++K L A+V+ KG+ + K+++D
Sbjct: 823 GTKIEKEKIARELAAQEAQNIEAEKKKKEIKDLEAKVDYEKQKGEKIKEEAEKEIQDHRK 882
Query: 520 RV 525
+V
Sbjct: 883 KV 884
>U41263-11|AAO38595.1| 516|Caenorhabditis elegans Hypothetical
protein T19D12.2c protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -1
Query: 509 SLSCFVKTTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSSLSPF 360
S +CF +S PSP T P T F +T +S+ STSS SPF
Sbjct: 384 SFTCFDDGSSTPSPTTRCPGTQGTTQPGF-----STTTSLSPSTSSSSPF 428
>U41263-10|AAO38593.1| 610|Caenorhabditis elegans Hypothetical
protein T19D12.2a protein.
Length = 610
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = -1
Query: 509 SLSCFVKTTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSSLSPF 360
S +CF +S PSP T P T F +T +S+ STSS SPF
Sbjct: 384 SFTCFDDGSSTPSPTTRCPGTQGTTQPGF-----STTTSLSPSTSSSSPF 428
>AL590342-5|CAC35862.1| 507|Caenorhabditis elegans Hypothetical
protein Y66A7A.8 protein.
Length = 507
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 524 TRIVSSLSCFVKTTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSS 372
T S+ S F T+S P P S D +FC+ SAT S T++
Sbjct: 440 TSFDSAYSSFNVTSSTPEQMCYNPIPSMSTDYSFCSFDSATSSPPLQPTAT 490
>AL032627-24|CAA21552.1| 507|Caenorhabditis elegans Hypothetical
protein Y66A7A.8 protein.
Length = 507
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 524 TRIVSSLSCFVKTTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSS 372
T S+ S F T+S P P S D +FC+ SAT S T++
Sbjct: 440 TSFDSAYSSFNVTSSTPEQMCYNPIPSMSTDYSFCSFDSATSSPPLQPTAT 490
>AL032622-8|CAA21503.1| 507|Caenorhabditis elegans Y66A7A.8
protein.
Length = 507
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1
Query: 524 TRIVSSLSCFVKTTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSS 372
T S+ S F T+S P P S D +FC+ SAT S T++
Sbjct: 440 TSFDSAYSSFNVTSSTPEQMCYNPIPSMSTDYSFCSFDSATSSPPLQPTAT 490
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 488 TTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNST 378
T S+PSP ++ PSTS LT S+T SS ST
Sbjct: 473 TNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 509
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 488 TTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNST 378
T S+PSP ++ PSTS LT S+T SS ST
Sbjct: 680 TNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 488 TTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNST 378
T S+PSP ++ PSTS LT S+T SS ST
Sbjct: 680 TNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
>AC025716-16|AAK39609.2| 917|Caenorhabditis elegans Hypothetical
protein Y39G10AR.5 protein.
Length = 917
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 227 FTAVCVRLTNPLKFAVLTHVCSTLWVALTMPLIF 126
F VC LTN +K V H C+ L + L+F
Sbjct: 27 FAGVCFSLTNTVKHCVEQHACTNDGKYLVIALVF 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,472,979
Number of Sequences: 27780
Number of extensions: 474217
Number of successful extensions: 1442
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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