Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_J09
(1347 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 39 0.009
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 38 0.016
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 38 0.016
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.021
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.021
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.021
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.049
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.049
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.065
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.065
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.065
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 36 0.065
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 35 0.11
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 35 0.11
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 35 0.15
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 34 0.20
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 34 0.26
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 34 0.26
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.46
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 33 0.46
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.61
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.61
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.61
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.81
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 32 0.81
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.4
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.4
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 26 1.7
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 26 1.7
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 26 1.7
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 26 1.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.9
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 2.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 2.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 3.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 3.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 3.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 3.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 3.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 4.3
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 30 4.3
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 5.7
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 5.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 5.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 5.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.7
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 26 6.5
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 26 6.5
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 26 6.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 7.5
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 7.5
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 7.5
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 7.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 7.5
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 24 8.4
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 9.9
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 9.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 9.9
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 9.9
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 9.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 9.9
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 9.9
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 38.7 bits (86), Expect = 0.009
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXX 1079
P P PP P PP P P G P P P PPPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSE 1399
Query: 1078 XXKXPXXXXN 1049
K P N
Sbjct: 1400 EKKNPLPTAN 1409
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
P P PPPP P P P G P PPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP 1379
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 37.9 bits (84), Expect = 0.016
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXPXNXKXXP 1063
PPPP P PP P P + PPPPPP P + P
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PPPP G P PP P PPPPP P
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 37.9 bits (84), Expect = 0.016
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXPXNXKXXP 1063
PPPP P PP P P + PPPPPP P + P
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PPPP G P PP P PPPPP P
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.021
Identities = 26/87 (29%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Frame = -3
Query: 1258 PXXGNPXPPXGXX--NPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXT 1085
P G P PP G PP P P GP P P P PPPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPG 766
Query: 1084 XXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P F P P PP
Sbjct: 767 GCPPPPPPPPPGGF---KGGPPPPPPP 790
Score = 35.9 bits (79), Expect = 0.065
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
GGP PPPP P P P G P G P PPP
Sbjct: 724 GGPPPPPPPGGLPPIT-GGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 34.7 bits (76), Expect = 0.15
Identities = 30/112 (26%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Frame = -3
Query: 1330 GGXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPX---PPXXPGPXXXXXXXXGP 1160
G PP P P P P PP G P PP P P GP
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPP---PPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 1159 QNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P P P PPPPP P F P PP
Sbjct: 759 PPPPPPPGGCPPPP----PPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXG----XPXXPXGXXKPXPPP 1203
GGP PPPP P + P P G P P G K PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/80 (23%), Positives = 20/80 (25%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXP 1064
P G + PP GP P P P PPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Query: 1063 XXXXNXFXPXXXXPXXPXPP 1004
P P P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSG 1179
GGP PPPP P P P G P G P PPP SG
Sbjct: 711 GGP--PPPPGLPPITG--GPPPPPPPGGLPPITGGPP-PPPPPGGLPPISG 756
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.021
Identities = 26/87 (29%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Frame = -3
Query: 1258 PXXGNPXPPXGXX--NPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXT 1085
P G P PP G PP P P GP P P P PPPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPG 766
Query: 1084 XXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P F P P PP
Sbjct: 767 GCPPPPPPPPPGGF---KGGPPPPPPP 790
Score = 35.9 bits (79), Expect = 0.065
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
GGP PPPP P P P G P G P PPP
Sbjct: 724 GGPPPPPPPGGLPPIT-GGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 34.7 bits (76), Expect = 0.15
Identities = 30/112 (26%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Frame = -3
Query: 1330 GGXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPX---PPXXPGPXXXXXXXXGP 1160
G PP P P P P PP G P PP P P GP
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPP---PPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 1159 QNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P P P PPPPP P F P PP
Sbjct: 759 PPPPPPPGGCPPPP----PPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXG----XPXXPXGXXKPXPPP 1203
GGP PPPP P + P P G P P G K PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/80 (23%), Positives = 20/80 (25%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXP 1064
P G + PP GP P P P PPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 755
Query: 1063 XXXXNXFXPXXXXPXXPXPP 1004
P P P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSG 1179
GGP PPPP P P P G P G P PPP SG
Sbjct: 711 GGP--PPPPGLPPITG--GPPPPPPPGGLPPITGGPP-PPPPPGGLPPISG 756
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.021
Identities = 26/87 (29%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Frame = -3
Query: 1258 PXXGNPXPPXGXX--NPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXT 1085
P G P PP G PP P P GP P P P PPPPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPG 349
Query: 1084 XXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P F P P PP
Sbjct: 350 GCPPPPPPPPPGGF---KGGPPPPPPP 373
Score = 35.9 bits (79), Expect = 0.065
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
GGP PPPP P P P G P G P PPP
Sbjct: 307 GGPPPPPPPGGLPPIT-GGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 34.7 bits (76), Expect = 0.15
Identities = 30/112 (26%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Frame = -3
Query: 1330 GGXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPX---PPXXPGPXXXXXXXXGP 1160
G PP P P P P PP G P PP P P GP
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPP---PPPPPGGLPPITGGPPPPPPPGGLPPISGGP 341
Query: 1159 QNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P P P PPPPP P F P PP
Sbjct: 342 PPPPPPPGGCPPPP----PPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXG----XPXXPXGXXKPXPPP 1203
GGP PPPP P + P P G P P G K PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/80 (23%), Positives = 20/80 (25%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXP 1064
P G + PP GP P P P PPPPP
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS 338
Query: 1063 XXXXNXFXPXXXXPXXPXPP 1004
P P P PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPP 358
Score = 28.7 bits (61), Expect = 9.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSG 1179
GGP PPPP P P P G P G P PPP SG
Sbjct: 294 GGP--PPPPGLPPITG--GPPPPPPPGGLPPITGGPP-PPPPPGGLPPISG 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.049
Identities = 25/107 (23%), Positives = 26/107 (24%)
Frame = -3
Query: 1315 PPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPX 1136
PP P P P P G P PP PG G P P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 1135 XXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPPXXP 995
PPPPP P + P PP P
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
Score = 34.7 bits (76), Expect = 0.15
Identities = 21/77 (27%), Positives = 23/77 (29%)
Frame = -1
Query: 1314 PPXXXXXPXGPXXXFXXXPRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPX 1135
PP P P P PP PPPP G P P +P
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYPS 357
Query: 1134 XXPXLXXXKPPPPPPXP 1084
P + PP PP P
Sbjct: 358 AGPGMYPPPPPSRPPAP 374
Score = 33.9 bits (74), Expect = 0.26
Identities = 24/80 (30%), Positives = 26/80 (32%)
Frame = -1
Query: 1329 GAXXXPPXXXXXPXGPXXXFXXXPRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQ 1150
G PP GP P P G PPPP G P ++
Sbjct: 312 GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG-PGMYPPPPPSR 370
Query: 1149 PPFPXXXPXLXXXKPPPPPP 1090
PP P P PPPPPP
Sbjct: 371 PPAP---PSGHGMIPPPPPP 387
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 1325 PXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
P PPPP P PG P G P PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 302
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSGXG 1173
PG PPPP P + P P P P P PPP G G
Sbjct: 281 PGMTPRPPPP---PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.049
Identities = 25/107 (23%), Positives = 26/107 (24%)
Frame = -3
Query: 1315 PPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPX 1136
PP P P P P G P PP PG G P P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 1135 XXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPPXXP 995
PPPPP P + P PP P
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
Score = 34.7 bits (76), Expect = 0.15
Identities = 21/77 (27%), Positives = 23/77 (29%)
Frame = -1
Query: 1314 PPXXXXXPXGPXXXFXXXPRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPX 1135
PP P P P PP PPPP G P P +P
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYPS 367
Query: 1134 XXPXLXXXKPPPPPPXP 1084
P + PP PP P
Sbjct: 368 AGPGMYPPPPPSRPPAP 384
Score = 33.9 bits (74), Expect = 0.26
Identities = 24/80 (30%), Positives = 26/80 (32%)
Frame = -1
Query: 1329 GAXXXPPXXXXXPXGPXXXFXXXPRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQ 1150
G PP GP P P G PPPP G P ++
Sbjct: 322 GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG-PGMYPPPPPSR 380
Query: 1149 PPFPXXXPXLXXXKPPPPPP 1090
PP P P PPPPPP
Sbjct: 381 PPAP---PSGHGMIPPPPPP 397
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -2
Query: 1325 PXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
P PPPP P PG P G P PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 312
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSGXG 1173
PG PPPP P + P P P P P PPP G G
Sbjct: 291 PGMTPRPPPP---PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.065
Identities = 25/108 (23%), Positives = 26/108 (24%)
Frame = -3
Query: 1327 GXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPT 1148
G PP P P P P PP G P P P P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 312
Query: 1147 PLPXXXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P P T PPP + P P P PP
Sbjct: 313 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPP 1206
G P PPPP P A P P G P P P PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
Score = 32.7 bits (71), Expect = 0.61
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -3
Query: 1333 RGGXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQN 1154
RG PP P P G+P PP +P PP P G
Sbjct: 226 RGKRQAPPAGSPPPPPPPKG-SPPLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTGSPP 281
Query: 1153 PTPLPXXXAXXXXXKTPPPPP 1091
P P PPPPP
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPP 302
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSG 1179
P PPP P P P G P P P PPP +G
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = -3
Query: 1237 PPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXPXX 1058
PP G P PP P G +P P P +T PPP P
Sbjct: 232 PPAGSPPPPPPPKGSPPLA-----GSGSPPP-PPAAGSPPPPRTGSPPPPPTGSPPPPPA 285
Query: 1057 XXNXFXPXXXXPXXPXPP 1004
+ P P P PP
Sbjct: 286 GGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.065
Identities = 25/108 (23%), Positives = 26/108 (24%)
Frame = -3
Query: 1327 GXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPT 1148
G PP P P P P PP G P P P P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
Query: 1147 PLPXXXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P P T PPP + P P P PP
Sbjct: 334 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPP 1206
G P PPPP P A P P G P P P PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
Score = 32.7 bits (71), Expect = 0.61
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -3
Query: 1333 RGGXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQN 1154
RG PP P P G+P PP +P PP P G
Sbjct: 247 RGKRQAPPAGSPPPPPPPKG-SPPLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTGSPP 302
Query: 1153 PTPLPXXXAXXXXXKTPPPPP 1091
P P PPPPP
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPP 323
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSG 1179
P PPP P P P G P P P PPP +G
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = -3
Query: 1237 PPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXPXX 1058
PP G P PP P G +P P P +T PPP P
Sbjct: 253 PPAGSPPPPPPPKGSPPLA-----GSGSPPP-PPAAGSPPPPRTGSPPPPPTGSPPPPPA 306
Query: 1057 XXNXFXPXXXXPXXPXPP 1004
+ P P P PP
Sbjct: 307 GGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.065
Identities = 25/108 (23%), Positives = 26/108 (24%)
Frame = -3
Query: 1327 GXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPT 1148
G PP P P P P PP G P P P P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 318
Query: 1147 PLPXXXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPP 1004
P P T PPP + P P P PP
Sbjct: 319 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 1331 GGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPP 1206
G P PPPP P A P P G P P P PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
Score = 32.7 bits (71), Expect = 0.61
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -3
Query: 1333 RGGXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQN 1154
RG PP P P G+P PP +P PP P G
Sbjct: 232 RGKRQAPPAGSPPPPPPPKG-SPPLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTGSPP 287
Query: 1153 PTPLPXXXAXXXXXKTPPPPP 1091
P P PPPPP
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPP 308
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSG 1179
P PPP P P P G P P P PPP +G
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = -3
Query: 1237 PPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXXKXPXX 1058
PP G P PP P G +P P P +T PPP P
Sbjct: 238 PPAGSPPPPPPPKGSPPLA-----GSGSPPP-PPAAGSPPPPRTGSPPPPPTGSPPPPPA 291
Query: 1057 XXNXFXPXXXXPXXPXPP 1004
+ P P P PP
Sbjct: 292 GGSPPPPRAGSPPPPPPP 309
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.065
Identities = 25/88 (28%), Positives = 29/88 (32%)
Frame = +3
Query: 996 GXWGGXGFXGXXXXGXXXLXXXXGXFXCXXVXGGGGGVFXXXXXAXXXGRGVGFWGPSXS 1175
G GG G+ G G + G + GGGGG G G+G G
Sbjct: 122 GGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGG---GGDFGGYGGGGMGGGGYGGG 178
Query: 1176 XXXXXGPGXXGGXGFXXPXGGXGXPXXG 1259
G G GG G GG G G
Sbjct: 179 GDGGYGGGGFGGGGMGGYGGGMGGGGYG 206
Score = 35.9 bits (79), Expect = 0.065
Identities = 28/91 (30%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Frame = +3
Query: 996 GXWGGXGFXGXXXXGXXXLXXXXGXFXCXXVXGGGGGV------FXXXXXAXXXGRGVGF 1157
G +GG G G G G F + G GGG+ G G G
Sbjct: 163 GGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGG 222
Query: 1158 WGPSXSXXXXXGPGXXGGXGFXXPXGGXGXP 1250
+GPS GPG GG G GG G P
Sbjct: 223 YGPSGGYGGGYGPG--GGYGMGGGGGGGGCP 251
Score = 31.9 bits (69), Expect = 1.1
Identities = 30/118 (25%), Positives = 33/118 (27%), Gaps = 1/118 (0%)
Frame = +3
Query: 909 GGXXGPXXXXXXGXXGXPXXXXXEKXXXXGXWGGXGFXGXXXXGXXXLXXXXGXFXCXXV 1088
GG G G G G +GG G G G G +
Sbjct: 121 GGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGD 180
Query: 1089 XG-GGGGVFXXXXXAXXXGRGVGFWGPSXSXXXXXGPGXXGGXGFXXPXGGXGXPXXG 1259
G GGGG G G G +G G G GG G GG P G
Sbjct: 181 GGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGG 238
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 35.1 bits (77), Expect = 0.11
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQ--PPFPXXXPXLXXXKPPPPPPXP 1084
PPPP P T PP P P + PPPPPP P
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 35.1 bits (77), Expect = 0.11
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQ--PPFPXXXPXLXXXKPPPPPPXP 1084
PPPP P T PP P P + PPPPPP P
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 34.7 bits (76), Expect = 0.15
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = -1
Query: 1233 PWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKP---PPPPPXP 1084
PWG PPPP G P +PP P P P PPPPP P
Sbjct: 37 PWG---PPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPP 86
Score = 33.1 bits (72), Expect = 0.46
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = -1
Query: 1284 PXXXFXXXPRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKP 1105
P F P PPW PPP + P +PP+ P P
Sbjct: 26 PPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDR--PPPPWRRPPWHRRPPWGLPPPP 83
Query: 1104 PPPPPXP 1084
PPP P P
Sbjct: 84 PPPEPEP 90
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -1
Query: 1236 PPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PP PPPP P PP P L PPPPPP P
Sbjct: 536 PPVSSIPPPPPIAGLLA--ANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPP 584
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 1149 PPFPXXXPXLXXXKPPPPPP 1090
PP P P L PPPPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPPPP 596
Score = 27.1 bits (57), Expect(2) = 1.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 1107 PPPPPPXPXNXKXXP 1063
PPPPPP P N P
Sbjct: 562 PPPPPPLPQNLSGAP 576
Score = 23.0 bits (47), Expect(2) = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = -1
Query: 1218 TPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPP 1093
+PP P G PP P P PPPPP
Sbjct: 507 SPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSI--PPPPP 546
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.26
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +3
Query: 1146 GVGFWGPSXSXXXXXGPGXXGGXGFXXPXGGXGXPXXGXXXXXXXXGXXGXXXXXGGXXX 1325
G G GP GPG GG G P G G G G G GG
Sbjct: 52 GPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYGGGGYGGYGRYGRYGRYGGYGGYGGYGG 111
Query: 1326 P 1328
P
Sbjct: 112 P 112
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 1204 GGGXGXXXPXGXXGXPXXGXPGKXXXRAXXGXXXGGGGXXGP 1329
GGG G P G G G G+ G G GG GP
Sbjct: 71 GGGPGAFGPYGRYGGGGYGGYGRYGRYGRYGGYGGYGGYGGP 112
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.26
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +3
Query: 1146 GVGFWGPSXSXXXXXGPGXXGGXGFXXPXGGXGXPXXGXXXXXXXXGXXGXXXXXGGXXX 1325
G G GP GPG GG G P G G G G G GG
Sbjct: 52 GPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYGGGGYGGYGRYGRYGRYGGYGGYGGYGG 111
Query: 1326 P 1328
P
Sbjct: 112 P 112
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 1204 GGGXGXXXPXGXXGXPXXGXPGKXXXRAXXGXXXGGGGXXGP 1329
GGG G P G G G G+ G G GG GP
Sbjct: 71 GGGPGAFGPYGRYGGGGYGGYGRYGRYGRYGGYGGYGGYGGP 112
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein 33
protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.46
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
P GP PP P P A PG P P G P PP
Sbjct: 154 PDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPP 197
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 33.1 bits (72), Expect = 0.46
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 1161 PKTQPPFPXXXPXLXXXKPPPPPPXPXNXKXXP 1063
P PP P L PPPPPP P K P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPP 99
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.61
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 1204 GGGXGXXXPXGXXGXPXXGXPGKXXXRAXXGXXXGGGGXXGPP 1332
GGG P G G P G G G G GG GPP
Sbjct: 160 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 202
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.61
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 1204 GGGXGXXXPXGXXGXPXXGXPGKXXXRAXXGXXXGGGGXXGPP 1332
GGG P G G P G G G G GG GPP
Sbjct: 440 GGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 482
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.61
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = -3
Query: 1315 PPXXXXXPXXPXXXFXXXXPXXGN-----PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNP 1151
PP P P GN P PP G +P PP P + P
Sbjct: 130 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRP 189
Query: 1150 TPLPXXXAXXXXXKTPPPPP 1091
P P TPPPPP
Sbjct: 190 PPPPKGTG------TPPPPP 203
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPP 1091
P PP G P PP P + P P P TPPPPP
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG------TPPPPP 78
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -1
Query: 1236 PPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPP 1093
PP G TPPPP G + PP P PPPPP
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPP-----PPKGTGSPPPPP 141
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = -3
Query: 1315 PPXXXXXPXXPXXXFXXXXPXXGN-----PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNP 1151
PP P P GN P PP G +P PP P + P
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP 158
Query: 1150 TPLPXXXAXXXXXKTPPPPP 1091
P P +PPPPP
Sbjct: 159 PPPPKGTG------SPPPPP 172
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPP 1091
P PP G +P PP P + P P P +PPPPP
Sbjct: 221 PPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTG------SPPPPP 265
Score = 29.9 bits (64), Expect = 4.3
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Frame = -3
Query: 1315 PPXXXXXPXXPXXXFXXXXPXXGN-----PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNP 1151
PP P P GN P PP G +P PP P + P
Sbjct: 223 PPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP 282
Query: 1150 TPLPXXXAXXXXXKTPPPP 1094
P P TPPPP
Sbjct: 283 PPPPKGTG------TPPPP 295
Score = 28.7 bits (61), Expect = 9.9
Identities = 22/80 (27%), Positives = 22/80 (27%), Gaps = 5/80 (6%)
Frame = -3
Query: 1315 PPXXXXXPXXPXXXFXXXXPXXGN-----PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNP 1151
PP P P GN P PP G P PP P
Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRR 95
Query: 1150 TPLPXXXAXXXXXKTPPPPP 1091
P P TPPPPP
Sbjct: 96 PPPPPKGTG-----TPPPPP 110
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPP 1091
P P PP P P P P P P PLP PPPPP
Sbjct: 460 PTTPKPAPPPPSRIPNPSPSPQPAEVSK---SPPPPPPLPPIATPSSVPPPPPPPP 512
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -1
Query: 1245 TXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXK--PPPPPPXP 1084
T P PPPP PP P P + PPPPPP P
Sbjct: 457 TTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 32.3 bits (70), Expect = 0.81
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGGXXVXXXRGX 1264
G GGGGGG G G GG GGGG GG G
Sbjct: 72 GFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGGFGDILGG 131
Query: 1265 XXKXXXGPXGXXXXXGGXXXAP 1330
G G GG P
Sbjct: 132 IGSLIGGGGGGQYNGGGGNVNP 153
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGG 1150
G GGGGGGF G G GG
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGG 79
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/81 (25%), Positives = 22/81 (27%), Gaps = 4/81 (4%)
Frame = -1
Query: 1314 PPXXXXXPXGPXXXFXXXPRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPX 1135
PP P P T P PPPP PP P
Sbjct: 441 PPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 500
Query: 1134 XXPXLXXXK----PPPPPPXP 1084
P + PPPPPP P
Sbjct: 501 PLPPIATPSSVPPPPPPPPPP 521
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPP 1091
P PP NP P P P P PLP PPPPP
Sbjct: 474 PPPPSRIPNPSPSPQPA-----EVSKSPPPPPPLPPIATPSSVPPPPPPPP 519
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPP 1091
P P PP P P P P P P+ + PPPPP
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGG 1237
G GGGGGGF G G GG G GGGG GG
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGG 108
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical protein
Y45F10B.13a protein.
Length = 633
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1161 PKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PK Q P PPPPPP P
Sbjct: 248 PKQQDHVVPEPPREKSVPPPPPPPPP 273
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 1107 PPPPPPXPXNXKXXP 1063
PPPPPP P P
Sbjct: 267 PPPPPPPPKPVSREP 281
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1161 PKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PK Q P PPPPPP P
Sbjct: 248 PKQQDHVVPEPPREKSVPPPPPPPPP 273
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 1107 PPPPPPXPXNXKXXP 1063
PPPPPP P P
Sbjct: 267 PPPPPPPPKPVSREP 281
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical protein
Y45F10B.13b protein.
Length = 618
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1161 PKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PK Q P PPPPPP P
Sbjct: 233 PKQQDHVVPEPPREKSVPPPPPPPPP 258
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 1107 PPPPPPXPXNXKXXP 1063
PPPPPP P P
Sbjct: 252 PPPPPPPPKPVSREP 266
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 25.8 bits (54), Expect(2) = 1.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1161 PKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PK Q P PPPPPP P
Sbjct: 233 PKQQDHVVPEPPREKSVPPPPPPPPP 258
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 1107 PPPPPPXPXNXKXXP 1063
PPPPPP P P
Sbjct: 252 PPPPPPPPKPVSREP 266
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 1158 KTQPPFPXXXPXLXXXKPPPPPPXP 1084
K+Q +P P +PPPPPP P
Sbjct: 9 KSQTTYPESAPAATTPQPPPPPPPP 33
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -3
Query: 1216 PXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPP 1091
P PP P P P P P A + PPPPP
Sbjct: 95 PAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP 136
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/124 (21%), Positives = 30/124 (24%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXX 1079
P N P G +P P GP GP P P + P P
Sbjct: 985 PSDPNKPSPNGPSDPVKPSPSGP-----SPNGPSPNGPSPNGPSPNGPSPNGPTPNWPSP 1039
Query: 1078 XXKXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFSXXXXXGXPXXPXXXXXXGPXXPPXRG 899
P P P P P P + P P GP P G
Sbjct: 1040 NGPSPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPG 1099
Query: 898 IPAP 887
P
Sbjct: 1100 PNGP 1103
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 2.5
Identities = 31/119 (26%), Positives = 32/119 (26%), Gaps = 2/119 (1%)
Frame = -3
Query: 1249 GNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNP-TP-LPXXXAXXXXXKTPPPPPXTXXX 1076
G P P G P PP PGP P NP P +P P PP
Sbjct: 207 GAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGP 266
Query: 1075 XKXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFSXXXXXGXPXXPXXXXXXGPXXPPXRG 899
P P P PP P G P P GP P G
Sbjct: 267 IGPPGQPG---APGSSQPGPQGPPGDP--------GIDGAPGNPGSPGEPGPPGQPGAG 314
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGG 1237
G GGGGGG G GG G P P G GG GG
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG 74
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/77 (29%), Positives = 23/77 (29%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGGXXVXXXRGX 1264
G GGGGG G G GG G P P GGG GG G
Sbjct: 25 GGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
Query: 1265 XXKXXXGPXGXXXXXGG 1315
G G GG
Sbjct: 85 CGGGGGGCGGGGGGCGG 101
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/77 (29%), Positives = 23/77 (29%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGGXXVXXXRGX 1264
G G GGGG G G GG G P P GGG GG G
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGC 141
Query: 1265 XXKXXXGPXGXXXXXGG 1315
G G GG
Sbjct: 142 GGGGGGGCGGGGGGCGG 158
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 1174 PXPEXXXXXXGGGXGXXXPXGXXGXPXXGXPGKXXXRAXXGXXXGGGGXXGPPG 1335
P P GGG G G G G G G GGGG G G
Sbjct: 114 PPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGG 167
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 3.2
Identities = 28/126 (22%), Positives = 31/126 (24%), Gaps = 6/126 (4%)
Frame = -3
Query: 1246 NPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKT----PPPPPXTXX 1079
NP PP +P P PG P P + PP P
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 1078 XXKXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFS--XXXXXGXPXXPXXXXXXGPXXPPX 905
P N P P P P + G P P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 904 RGIPAP 887
G P P
Sbjct: 223 AGPPGP 228
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTP 1145
P G P P G P P PGP GP P P
Sbjct: 149 PCPGGPPGPAGPAGP--PGPPGPDGNPGSPAGPSGPGP 184
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 3.2
Identities = 28/126 (22%), Positives = 31/126 (24%), Gaps = 6/126 (4%)
Frame = -3
Query: 1246 NPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKT----PPPPPXTXX 1079
NP PP +P P PG P P + PP P
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 1078 XXKXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFS--XXXXXGXPXXPXXXXXXGPXXPPX 905
P N P P P P + G P P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 904 RGIPAP 887
G P P
Sbjct: 223 AGPPGP 228
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTP 1145
P G P P G P P PGP GP P P
Sbjct: 149 PCPGGPPGPAGPAGP--PGPPGPDGNPGSPAGPSGPGP 184
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 3.2
Identities = 26/122 (21%), Positives = 31/122 (25%), Gaps = 2/122 (1%)
Frame = -3
Query: 1246 NPXPPXGXXNPXPPXXPG--PXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXX 1073
+P P +P P P P GP +P+ P P +
Sbjct: 150 SPGPVDPSEDPQPSVEPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGP 209
Query: 1072 KXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFSXXXXXGXPXXPXXXXXXGPXXPPXRGIP 893
P P P P P S P P GP PP R P
Sbjct: 210 PSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPP 269
Query: 892 AP 887
P
Sbjct: 270 GP 271
Score = 29.9 bits (64), Expect = 4.3
Identities = 20/81 (24%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPP-PPPXTXXXXKX 1067
P P +P P PGP + P+P P + PP PP +
Sbjct: 197 PVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRR 256
Query: 1066 PXXXXNXFXPXXXXPXXPXPP 1004
P P P P PP
Sbjct: 257 PPGPPG--PPTRRPPGPPGPP 275
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 3.2
Identities = 28/126 (22%), Positives = 31/126 (24%), Gaps = 6/126 (4%)
Frame = -3
Query: 1246 NPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKT----PPPPPXTXX 1079
NP PP +P P PG P P + PP P
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 1078 XXKXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFS--XXXXXGXPXXPXXXXXXGPXXPPX 905
P N P P P P + G P P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 904 RGIPAP 887
G P P
Sbjct: 223 AGPPGP 228
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTP 1145
P G P P G P P PGP GP P P
Sbjct: 149 PCPGGPPGPAGPAGP--PGPPGPDGNPGSPAGPSGPGP 184
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 3.2
Identities = 28/126 (22%), Positives = 31/126 (24%), Gaps = 6/126 (4%)
Frame = -3
Query: 1246 NPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKT----PPPPPXTXX 1079
NP PP +P P PG P P + PP P
Sbjct: 103 NPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAG 162
Query: 1078 XXKXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFS--XXXXXGXPXXPXXXXXXGPXXPPX 905
P N P P P P + G P P GP P
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGP 222
Query: 904 RGIPAP 887
G P P
Sbjct: 223 AGPPGP 228
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTP 1145
P G P P G P P PGP GP P P
Sbjct: 149 PCPGGPPGPAGPAGP--PGPPGPDGNPGSPAGPSGPGP 184
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/84 (25%), Positives = 22/84 (26%), Gaps = 3/84 (3%)
Frame = -3
Query: 1246 NPXPPXGXXNPXPPXXPGPXXXXXXXXGPQN---PTPLPXXXAXXXXXKTPPPPPXTXXX 1076
NP PP P P P + PTP P PPPPP
Sbjct: 502 NPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDL 561
Query: 1075 XKXPXXXXNXFXPXXXXPXXPXPP 1004
K P P PP
Sbjct: 562 LKGAVAGLKSVPGGPPPPPPPPPP 585
Score = 29.5 bits (63), Expect = 5.7
Identities = 26/122 (21%), Positives = 27/122 (22%), Gaps = 5/122 (4%)
Frame = -3
Query: 1258 PXXGNPXPPXGXXNPXPPXX-----PGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPP 1094
P N PP G + P P P P P P P PPPP
Sbjct: 464 PINANAPPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPP 523
Query: 1093 PXTXXXXKXPXXXXNXFXPXXXXPXXPXPPXXPXXXXFSXXXXXGXPXXPXXXXXXGPXX 914
P P PP P G P P
Sbjct: 524 PMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
Query: 913 PP 908
PP
Sbjct: 584 PP 585
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 4.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 1236 PPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPP 1093
PP PPPP F G P P P PPPPP
Sbjct: 77 PPGPGGIPPPPPM----FAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGG 1237
G GGGGGG G G GG P P GGGG GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGG------CAPPPAPCGGGCGGGGGGCGGGG 70
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGG 1237
G GGGGGG G G GG G GGGG GG
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGG 1237
G GGGGGG G G GG P P GGGG GG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGG------CAPPPAPCGGGCGGGGGGCGGGG 70
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGG 1237
G GGGGGG G G GG G GGGG GG
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 1152 QPPFPXXXPXLXXXKPPPPPPXP 1084
QPP P + PPPPPP P
Sbjct: 70 QPPQPYAQSPIAAVPPPPPPPPP 92
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSGXG 1173
P GP PP P P A PG P P PP G G
Sbjct: 197 PAGPAGPPGPDGNPGSAGADGQPGGPGQDGAPGSDAAYCPCPPRSGAIAGGGGG 250
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPPXXXXXXSGXG 1173
P GP PP P P A PG P P PP G G
Sbjct: 197 PAGPAGPPGPDGNPGSAGADGQPGGPGQDGAPGSDAAYCPCPPRSGAIAGGGGG 250
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein
F54B11.2 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.7
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 5/89 (5%)
Frame = -3
Query: 1246 NPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPPPPXTXXXXKX 1067
NP PP NP P PG P NP A KTPPP
Sbjct: 107 NPGPPGVAGNPGKPGKPG------KPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGPPG 160
Query: 1066 PXXXXNXFXP-----XXXXPXXPXPPXXP 995
P P P P PP P
Sbjct: 161 PPGPDGPAGPAGPDGEAGSPAAPSPPGPP 189
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical protein
T21B6.3 protein.
Length = 821
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 1155 TQPPFPXXXPXLXXXKPPPPP 1093
TQPP P P PPPPP
Sbjct: 421 TQPPLPQPYPTRYRPAPPPPP 441
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical protein
T19A5.3a protein.
Length = 715
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLG 1162
G GGGGGGF G G GG+ G
Sbjct: 481 GGGGGGGGFGGGGGGFGGGGGGFGSG 506
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 1149 PPFPXXXPXLXXXKPPPPPPXP 1084
PP P P PPPPPP P
Sbjct: 154 PPTPIPTPVPILEPPPPPPPVP 175
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 1260 PRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXP 1084
P T P PPPP P PP P PPPPPP P
Sbjct: 203 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP-----PPPPPPPP 256
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.5 bits (63), Expect = 5.7
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 1152 GFWGPSXSXXXXXGPGXXGGXGFXXPXGGXGXP-XXGXXXXXXXXGXXGXXXXXGGXXXP 1328
GF+ S GPG GG G GG G P G G G GG P
Sbjct: 89 GFYRYSGGLGTPGGPGNPGGPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTP 148
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 1249 GNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNP 1151
GNP P G P P PG GP NP
Sbjct: 104 GNPGGPGGLGTPGGPGTPGGPGNPGGLGGPGNP 136
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 1085 GXGGGGGGFXXXXXGXXXGKGGWVLGXXXXPXXXPXXXXXGGGGVXXPXGG 1237
G GGGGGG G GG P P GGG GG
Sbjct: 363 GGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGG 413
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 1260 PRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXP 1084
P T P PPPP P PP P PPPPPP P
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP-----PPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -1
Query: 1260 PRXXXTXXPPWGXXTPPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXP 1084
P T P PPPP P PP P PPPPPP P
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP-----PPPPPPPP 242
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 25.8 bits (54), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 1107 PPPPPPXPXNXK 1072
PPPPPP P N +
Sbjct: 188 PPPPPPPPQNPR 199
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 1140 PXXXPXLXXXKPPPPPP 1090
P L PPPPPP
Sbjct: 179 PSFMTSLQAPPPPPPPP 195
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 25.8 bits (54), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 1107 PPPPPPXPXNXK 1072
PPPPPP P N +
Sbjct: 188 PPPPPPPPQNPR 199
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 1140 PXXXPXLXXXKPPPPPP 1090
P L PPPPPP
Sbjct: 179 PSFMTSLQAPPPPPPPP 195
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 25.8 bits (54), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 1107 PPPPPPXPXNXK 1072
PPPPPP P N +
Sbjct: 188 PPPPPPPPQNPR 199
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -1
Query: 1140 PXXXPXLXXXKPPPPPP 1090
P L PPPPPP
Sbjct: 179 PSFMTSLQAPPPPPPPP 195
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPPPXP 1084
PPPP T+ P P P PPPPPP P
Sbjct: 326 PPPPMKLDPSPQPAATPVEITEIP-PIISPPAPPPPPPPPPPPP 368
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 7.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 396 PSRITPFNPFQIPLLNTIIL 455
PS +TPFNP+Q+ + I+L
Sbjct: 82 PSMVTPFNPYQLMMYRNIML 101
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 7.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 396 PSRITPFNPFQIPLLNTIIL 455
PS +TPFNP+Q+ + I+L
Sbjct: 82 PSMVTPFNPYQLMMYRNIML 101
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 7.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 396 PSRITPFNPFQIPLLNTIIL 455
PS +TPFNP+Q+ + I+L
Sbjct: 82 PSMVTPFNPYQLMMYRNIML 101
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = -2
Query: 1334 PGGPXX--PPPPXXXPXXALXXXXPGXPXXGXPXXPXGXXKPXPPP 1203
PGGP PPPP G P P P G PPP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical protein
R06C1.3 protein.
Length = 468
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 13/44 (29%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPF--PXXXPXLXXXKPPPPPP 1090
PPPP + F P P PPPPPP
Sbjct: 322 PPPPLLMNTSIVHQLPAEAPSTIQFVEPSAAPPTNIPPPPPPPP 365
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 1107 PPPPPPXP 1084
PPPPPP P
Sbjct: 359 PPPPPPPP 366
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical protein
B0285.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPP-PPPXP 1084
PPPP F +QPP P P PPP PPP P
Sbjct: 189 PPPP-----SFNINPFQPMFSQPPPPPLPPNSQFMTPPPRPPPAP 228
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXP-XXGXPXXPXGXXKPXPP 1206
P GP PP P P + PG P P P P PP
Sbjct: 149 PQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPP 192
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 9.9
Identities = 21/85 (24%), Positives = 24/85 (28%), Gaps = 2/85 (2%)
Frame = -3
Query: 1243 PXPPXGXXNPXPPXXPGPXXXXXXXXGPQNPTPLPXXXAXXXXXKTPPP--PPXTXXXXK 1070
P P G PP P P P P P P ++PPP PP T +
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSP--PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQ 168
Query: 1069 XPXXXXNXFXPXXXXPXXPXPPXXP 995
P P P P
Sbjct: 169 RRPPRTPPSPEPRNPPRTPPSPIPP 193
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPP 1093
P PP GF P PP P L PPPPP
Sbjct: 662 PVPPPGGLGGFMP----PPPPPPPMPGDLSSLLAAAPPPPP 698
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 9.9
Identities = 27/112 (24%), Positives = 28/112 (25%)
Frame = -3
Query: 1330 GGXXXPPXXXXXPXXPXXXFXXXXPXXGNPXPPXGXXNPXPPXXPGPXXXXXXXXGPQNP 1151
G PP P P G PP N P PGP GP+ P
Sbjct: 119 GNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGP-------PGPEGP 171
Query: 1150 TPLPXXXAXXXXXKTPPPPPXTXXXXKXPXXXXNXFXPXXXXPXXPXPPXXP 995
P PP P P N P P P P P
Sbjct: 172 NGEPGNKGPAG----PPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQP 219
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 1215 PPPPXXXXXGFXXGXXXXPKTQPPFPXXXPXLXXXKPPPPP 1093
P PP GF P PP P L PPPPP
Sbjct: 662 PVPPPGGLGGFMP----PPPPPPPMPGDLSSLLAAAPPPPP 698
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = -2
Query: 1334 PGGPXXPPPPXXXPXXALXXXXPGXP-XXGXPXXPXGXXKPXPP 1206
P GP PP P P + PG P P P P PP
Sbjct: 149 PQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPP 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,716,484
Number of Sequences: 27780
Number of extensions: 425159
Number of successful extensions: 4385
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3119
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3788030792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -