Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_J07
(1334 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 42 0.005
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 42 0.005
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 42 0.005
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 42 0.005
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 42 0.007
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 35 0.77
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 35 0.77
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 35 0.77
BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein. 35 0.77
AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein. 35 0.77
AL139330-1|CAI12978.1| 581|Homo sapiens synaptojanin 2 protein. 35 0.77
AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein. 35 0.77
AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein. 35 0.77
AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein. 35 0.77
X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein. 34 1.0
BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein. 34 1.0
AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein. 34 1.0
AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform... 34 1.0
AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform... 34 1.0
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 33 1.8
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 33 1.8
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 33 1.8
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 33 1.8
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 33 1.8
BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1 p... 33 2.3
AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SE... 33 2.3
AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein. 33 2.3
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 33 3.1
BC105003-1|AAI05004.1| 802|Homo sapiens neuronal PAS domain pro... 32 4.1
BC105001-1|AAI05002.1| 802|Homo sapiens HLH-PAS transcription f... 32 4.1
AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein. 32 4.1
AK096253-1|BAC04738.1| 802|Homo sapiens protein ( Homo sapiens ... 32 4.1
AK094025-1|BAC04271.1| 483|Homo sapiens protein ( Homo sapiens ... 32 4.1
AB049469-1|BAC19830.1| 802|Homo sapiens HLH-PAS transcription f... 32 4.1
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 32 5.4
AF042838-1|AAC97073.1| 1495|Homo sapiens MEK kinase 1 protein. 32 5.4
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein. 31 7.1
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein. 31 7.1
M64979-1|AAA58611.1| 376|Homo sapiens glial factor-1 protein. 31 7.1
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip... 31 7.1
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip... 31 7.1
X82877-1|CAA58058.1| 617|Homo sapiens sodium-D-glucose cotransp... 31 9.4
AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle prefere... 31 9.4
AL121992-8|CAI95731.1| 617|Homo sapiens regulatory solute carri... 31 9.4
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 31 9.4
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 31 9.4
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 41.9 bits (94), Expect = 0.005
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 612 AIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEMKDREQELKKM 791
A APPL+ P + P+ SP +R P P +P EK+ +E +++K++E++ K
Sbjct: 649 APAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLP--EKLFEEKEKVKEKEKKKDKK 706
Query: 792 RKKQK 806
KK+K
Sbjct: 707 EKKKK 711
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 41.9 bits (94), Expect = 0.005
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 612 AIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEMKDREQELKKM 791
A APPL+ P + P+ SP +R P P +P EK+ +E +++K++E++ K
Sbjct: 649 APAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLP--EKLFEEKEKVKEKEKKKDKK 706
Query: 792 RKKQK 806
KK+K
Sbjct: 707 EKKKK 711
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 41.9 bits (94), Expect = 0.005
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 612 AIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEMKDREQELKKM 791
A APPL+ P + P+ SP +R P P +P EK+ +E +++K++E++ K
Sbjct: 649 APAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLP--EKLFEEKEKVKEKEKKKDKK 706
Query: 792 RKKQK 806
KK+K
Sbjct: 707 EKKKK 711
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 41.9 bits (94), Expect = 0.005
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 612 AIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEMKDREQELKKM 791
A APPL+ P + P+ SP +R P P +P EK+ +E +++K++E++ K
Sbjct: 649 APAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLP--EKLFEEKEKVKEKEKKKDKK 706
Query: 792 RKKQK 806
KK+K
Sbjct: 707 EKKKK 711
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 41.5 bits (93), Expect = 0.007
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 612 AIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEMKDREQELKKM 791
A APPL+ P + P+ SP +R P P +P EK+ +E ++ K++E++ K
Sbjct: 706 APAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLP--EKLFEEKEKPKEKEKKKDKK 763
Query: 792 RKKQK 806
+KK+K
Sbjct: 764 KKKKK 768
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 34.7 bits (76), Expect = 0.77
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTP 692
PPP+ S P T +PP PS P PP +P
Sbjct: 839 PPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSP 877
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 34.7 bits (76), Expect = 0.77
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTP 692
PPP+ S P T +PP PS P PP +P
Sbjct: 122 PPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSP 160
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 34.7 bits (76), Expect = 0.77
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTP 692
PPP+ S P T +PP PS P PP +P
Sbjct: 1464 PPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSP 1502
>BC043277-1|AAH43277.1| 839|Homo sapiens SYNJ2 protein protein.
Length = 839
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPV 707
P P+ A+ P T APPL+ P P + P + RT GKP+
Sbjct: 552 PEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRT--GKPL 593
>AL139330-4|CAI12983.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPV 707
P P+ A+ P T APPL+ P P + P + RT GKP+
Sbjct: 1209 PEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRT--GKPL 1250
>AL139330-1|CAI12978.1| 581|Homo sapiens synaptojanin 2 protein.
Length = 581
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPV 707
P P+ A+ P T APPL+ P P + P + RT GKP+
Sbjct: 294 PEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRT--GKPL 335
>AF318616-1|AAG46036.1| 1496|Homo sapiens synaptojanin 2 protein.
Length = 1496
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPV 707
P P+ A+ P T APPL+ P P + P + RT GKP+
Sbjct: 1209 PEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRT--GKPL 1250
>AF039945-1|AAD02178.1| 1443|Homo sapiens synaptojanin 2B protein.
Length = 1443
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPV 707
P P+ A+ P T APPL+ P P + P + RT GKP+
Sbjct: 1156 PEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRT--GKPL 1197
>AB002346-1|BAA20805.2| 1443|Homo sapiens KIAA0348 protein protein.
Length = 1443
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPV 707
P P+ A+ P T APPL+ P P + P + RT GKP+
Sbjct: 1156 PEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRT--GKPL 1197
>X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein.
Length = 1263
Score = 34.3 bits (75), Expect = 1.0
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +3
Query: 582 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEM 761
PS +AS + + P TP+ AP++ P++ +P P EE ++ +++++
Sbjct: 154 PSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLT-SPGAVPPLPSPSKEEEGLRAQVRDL 212
Query: 762 KDREQELKKMRKKQK 806
+++ + L+ R + K
Sbjct: 213 EEKLETLRLKRAEDK 227
Score = 33.5 bits (73), Expect = 1.8
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 558 ASKGKLPPPSNAASTP-NTAIAPPLIFPSTPVL-APVVSPPIINRTPEGKPVRKGYVPVE 731
AS G+L S+ STP T +A P+I TPVL +P PP+ + + E + +R +E
Sbjct: 158 ASAGELS--SSEPSTPAQTPLAAPII--PTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLE 213
Query: 732 EKIQKELQEMKDREQELKKMRK 797
EK++ + + + +LK++ K
Sbjct: 214 EKLETLRLKRAEDKAKLKELEK 235
>BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein.
Length = 1139
Score = 34.3 bits (75), Expect = 1.0
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +3
Query: 582 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEM 761
PS +AS + + P TP+ AP++ P++ +P P EE ++ +++++
Sbjct: 35 PSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLT-SPGAVPPLPSPSKEEEGLRAQVRDL 93
Query: 762 KDREQELKKMRKKQK 806
+++ + L+ R + K
Sbjct: 94 EEKLETLRLKRAEDK 108
Score = 33.5 bits (73), Expect = 1.8
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 558 ASKGKLPPPSNAASTP-NTAIAPPLIFPSTPVL-APVVSPPIINRTPEGKPVRKGYVPVE 731
AS G+L S+ STP T +A P+I TPVL +P PP+ + + E + +R +E
Sbjct: 39 ASAGELS--SSEPSTPAQTPLAAPII--PTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLE 94
Query: 732 EKIQKELQEMKDREQELKKMRK 797
EK++ + + + +LK++ K
Sbjct: 95 EKLETLRLKRAEDKAKLKELEK 116
>AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein.
Length = 1261
Score = 34.3 bits (75), Expect = 1.0
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +3
Query: 582 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEM 761
PS +AS + + P TP+ AP++ P++ +P P EE ++ +++++
Sbjct: 152 PSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLT-SPGAVPPLPSPSKEEEGLRAQVRDL 210
Query: 762 KDREQELKKMRKKQK 806
+++ + L+ R + K
Sbjct: 211 EEKLETLRLKRAEDK 225
Score = 33.5 bits (73), Expect = 1.8
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 558 ASKGKLPPPSNAASTP-NTAIAPPLIFPSTPVL-APVVSPPIINRTPEGKPVRKGYVPVE 731
AS G+L S+ STP T +A P+I TPVL +P PP+ + + E + +R +E
Sbjct: 156 ASAGELS--SSEPSTPAQTPLAAPII--PTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLE 211
Query: 732 EKIQKELQEMKDREQELKKMRK 797
EK++ + + + +LK++ K
Sbjct: 212 EKLETLRLKRAEDKAKLKELEK 233
>AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform
protein.
Length = 1144
Score = 34.3 bits (75), Expect = 1.0
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +3
Query: 582 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEM 761
PS +AS + + P TP+ AP++ P++ +P P EE ++ +++++
Sbjct: 35 PSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLT-SPGAVPPLPSPSKEEEGLRAQVRDL 93
Query: 762 KDREQELKKMRKKQK 806
+++ + L+ R + K
Sbjct: 94 EEKLETLRLKRAEDK 108
Score = 33.5 bits (73), Expect = 1.8
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 558 ASKGKLPPPSNAASTP-NTAIAPPLIFPSTPVL-APVVSPPIINRTPEGKPVRKGYVPVE 731
AS G+L S+ STP T +A P+I TPVL +P PP+ + + E + +R +E
Sbjct: 39 ASAGELS--SSEPSTPAQTPLAAPII--PTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLE 94
Query: 732 EKIQKELQEMKDREQELKKMRK 797
EK++ + + + +LK++ K
Sbjct: 95 EKLETLRLKRAEDKAKLKELEK 116
>AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform
protein.
Length = 1278
Score = 34.3 bits (75), Expect = 1.0
Identities = 17/75 (22%), Positives = 39/75 (52%)
Frame = +3
Query: 582 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEM 761
PS +AS + + P TP+ AP++ P++ +P P EE ++ +++++
Sbjct: 169 PSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLT-SPGAVPPLPSPSKEEEGLRAQVRDL 227
Query: 762 KDREQELKKMRKKQK 806
+++ + L+ R + K
Sbjct: 228 EEKLETLRLKRAEDK 242
Score = 33.5 bits (73), Expect = 1.8
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 558 ASKGKLPPPSNAASTP-NTAIAPPLIFPSTPVL-APVVSPPIINRTPEGKPVRKGYVPVE 731
AS G+L S+ STP T +A P+I TPVL +P PP+ + + E + +R +E
Sbjct: 173 ASAGELS--SSEPSTPAQTPLAAPII--PTPVLTSPGAVPPLPSPSKEEEGLRAQVRDLE 228
Query: 732 EKIQKELQEMKDREQELKKMRK 797
EK++ + + + +LK++ K
Sbjct: 229 EKLETLRLKRAEDKAKLKELEK 250
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 573 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGK 701
+PPP P PP+ P TP L P + N+TP+GK
Sbjct: 107 MPPPPGMMFPPGM---PPVTAPGTPALPPTEEIWVENKTPDGK 146
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/31 (45%), Positives = 26/31 (83%)
Frame = +3
Query: 729 EEKIQKELQEMKDREQELKKMRKKQKPFDLE 821
+EK +KEL+ K++E+EL+KM++++K +LE
Sbjct: 561 QEK-EKELERQKEKEKELQKMKEQEKECELE 590
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated
protein 2 protein.
Length = 2701
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/31 (45%), Positives = 26/31 (83%)
Frame = +3
Query: 729 EEKIQKELQEMKDREQELKKMRKKQKPFDLE 821
+EK +KEL+ K++E+EL+KM++++K +LE
Sbjct: 561 QEK-EKELERQKEKEKELQKMKEQEKECELE 590
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 573 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGK 701
+PPP P PP+ P TP L P + N+TP+GK
Sbjct: 107 MPPPPGMMFPPGM---PPVTAPGTPALPPTEEIWVENKTPDGK 146
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 573 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGK 701
+PPP P PP+ P TP L P + N+TP+GK
Sbjct: 111 MPPPPGMMFPPGM---PPVTAPGTPALPPTEEIWVENKTPDGK 150
>BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1
protein.
Length = 1542
Score = 33.1 bits (72), Expect = 2.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 618 APPLIFPSTPVLAPVVSPPI-----INRTPE-GKPVRKGYVPVEEKIQKELQEMKDREQE 779
APPL P P L P PP+ + +TP GK K P + Q Q+ +E+E
Sbjct: 1465 APPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEE 1524
Query: 780 LKKMRKKQ 803
+K R+++
Sbjct: 1525 VKAKRQRK 1532
>AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SEB)
protein.
Length = 1542
Score = 33.1 bits (72), Expect = 2.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 618 APPLIFPSTPVLAPVVSPPI-----INRTPE-GKPVRKGYVPVEEKIQKELQEMKDREQE 779
APPL P P L P PP+ + +TP GK K P + Q Q+ +E+E
Sbjct: 1465 APPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEE 1524
Query: 780 LKKMRKKQ 803
+K R+++
Sbjct: 1525 VKAKRQRK 1532
>AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.
Length = 1605
Score = 33.1 bits (72), Expect = 2.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 618 APPLIFPSTPVLAPVVSPPI-----INRTPE-GKPVRKGYVPVEEKIQKELQEMKDREQE 779
APPL P P L P PP+ + +TP GK K P + Q Q+ +E+E
Sbjct: 1528 APPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEE 1587
Query: 780 LKKMRKKQ 803
+K R+++
Sbjct: 1588 VKAKRQRK 1595
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 612 AIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEMKDREQE 779
A APPL+ P + P+ SP +R P P +P EK+ +E ++ K+++++
Sbjct: 627 APAPPLVLPPKELALPLFSPATASRVPAMLPSLLPVLP--EKLFEEKEKAKEKKKK 680
>BC105003-1|AAI05004.1| 802|Homo sapiens neuronal PAS domain
protein 4 protein.
Length = 802
Score = 32.3 bits (70), Expect = 4.1
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 570 KLPP-PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQK 746
KLPP PS+ + T +A + V P+V ++ TPE PV++ + EK Q
Sbjct: 573 KLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLL--TPEASPVKQSFFHYSEKEQN 630
Query: 747 ELQEMKDREQELKKMRKKQKPFDLE 821
E+ + + +L + +PF E
Sbjct: 631 EIDRLIQQISQL--AQGMDRPFSAE 653
>BC105001-1|AAI05002.1| 802|Homo sapiens HLH-PAS transcription
factor NXF protein.
Length = 802
Score = 32.3 bits (70), Expect = 4.1
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 570 KLPP-PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQK 746
KLPP PS+ + T +A + V P+V ++ TPE PV++ + EK Q
Sbjct: 573 KLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLL--TPEASPVKQSFFHYSEKEQN 630
Query: 747 ELQEMKDREQELKKMRKKQKPFDLE 821
E+ + + +L + +PF E
Sbjct: 631 EIDRLIQQISQL--AQGMDRPFSAE 653
>AY152396-1|AAN73051.1| 1288|Homo sapiens synaptojanin 2A protein.
Length = 1288
Score = 32.3 bits (70), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRT 689
P P+ A+ P T APPL+ P P + P + RT
Sbjct: 1209 PEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRT 1246
>AK096253-1|BAC04738.1| 802|Homo sapiens protein ( Homo sapiens
cDNA FLJ38934 fis, clone NT2NE2014221. ).
Length = 802
Score = 32.3 bits (70), Expect = 4.1
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 570 KLPP-PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQK 746
KLPP PS+ + T +A + V P+V ++ TPE PV++ + EK Q
Sbjct: 573 KLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLL--TPEASPVKQSFFHYSEKEQN 630
Query: 747 ELQEMKDREQELKKMRKKQKPFDLE 821
E+ + + +L + +PF E
Sbjct: 631 EIDRLIQQISQL--AQGMDRPFSAE 653
>AK094025-1|BAC04271.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ36706 fis, clone UTERU2009483. ).
Length = 483
Score = 32.3 bits (70), Expect = 4.1
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 570 KLPP-PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQK 746
KLPP PS+ + T +A + V P+V ++ TPE PV++ + EK Q
Sbjct: 358 KLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLL--TPEASPVKQSFFHYSEKEQN 415
Query: 747 ELQEMKDREQELKKMRKKQKPFDLE 821
E+ + + +L + +PF E
Sbjct: 416 EIDRLIQQISQL--AQGMDRPFSAE 438
>AB049469-1|BAC19830.1| 802|Homo sapiens HLH-PAS transcription
factor NXF protein.
Length = 802
Score = 32.3 bits (70), Expect = 4.1
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 570 KLPP-PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQK 746
KLPP PS+ + T +A + V P+V ++ TPE PV++ + EK Q
Sbjct: 573 KLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLL--TPEASPVKQSFFHYSEKEQN 630
Query: 747 ELQEMKDREQELKKMRKKQKPFDLE 821
E+ + + +L + +PF E
Sbjct: 631 EIDRLIQQISQL--AQGMDRPFSAE 653
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 31.9 bits (69), Expect = 5.4
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 537 GIMQRFIASKGKLPPPSNAASTPNTAI--APPLIFPSTPVLAPVVSPPIINRTPEGKPVR 710
G Q S G L P++A S+P ++ AP TP P PP + + G+
Sbjct: 3075 GFPQNSNISAGMLGFPTSATSSPALSLSSAPTKPLLQTPPPPPPPPPPPPSSSLSGQQTE 3134
Query: 711 KGYVPVEEKIQKELQEMKDREQELKKMRKKQKP 809
+ E+K K + K +E+EL+ + ++ P
Sbjct: 3135 QQNKESEKKQTKPNKVKKIKEEELEATKPEKHP 3167
>AF042838-1|AAC97073.1| 1495|Homo sapiens MEK kinase 1 protein.
Length = 1495
Score = 31.9 bits (69), Expect = 5.4
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +3
Query: 573 LPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKE- 749
+PPP AAS + + P + +P + P R P +P E KE
Sbjct: 91 VPPPHGAASRRGAHLTESVAAPDSGASSPAAAEPGEKRAPAAEPSPAAAPAGREMENKET 150
Query: 750 ---LQEMKDREQELKKMRKKQK 806
L +M DR +E + +R+K K
Sbjct: 151 LKGLHKMDDRPEE-RMIREKLK 171
>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
Length = 1088
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 570 KLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKE 749
+LPPP A T + P + P+ +A V S P+ + + +PV+ P E +QKE
Sbjct: 685 ELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPM--QVVQKEPVQMELSPPMEVVQKE 742
>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
Length = 1097
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 570 KLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKE 749
+LPPP A T + P + P+ +A V S P+ + + +PV+ P E +QKE
Sbjct: 686 ELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPM--QVVQKEPVQMELSPPMEVVQKE 743
>M64979-1|AAA58611.1| 376|Homo sapiens glial factor-1 protein.
Length = 376
Score = 31.5 bits (68), Expect = 7.1
Identities = 20/87 (22%), Positives = 35/87 (40%)
Frame = +3
Query: 546 QRFIASKGKLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVP 725
+RFI + P P A P P + P P A PP R P+ +R ++
Sbjct: 287 RRFITVSKRAPRPRAALGPPAGTGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLE 346
Query: 726 VEEKIQKELQEMKDREQELKKMRKKQK 806
++++ + +EQ+ +K K
Sbjct: 347 RLQRVRSAQGQPASKEQQASGQQKLPK 373
>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
transcription factor protein.
Length = 1097
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 570 KLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKE 749
+LPPP A T + P + P+ +A V S P+ + + +PV+ P E +QKE
Sbjct: 686 ELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPM--QVVQKEPVQMELSPPMEVVQKE 743
>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
transcription factor variant protein.
Length = 1126
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 570 KLPPPSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKE 749
+LPPP A T + P + P+ +A V S P+ + + +PV+ P E +QKE
Sbjct: 715 ELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPM--QVVQKEPVQMELSPPMEVVQKE 772
>X82877-1|CAA58058.1| 617|Homo sapiens sodium-D-glucose
cotransporter protein.
Length = 617
Score = 31.1 bits (67), Expect = 9.4
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPV 650
PP S+ +S+P AI PPLIFP+T +
Sbjct: 555 PPTSHPSSSP--AILPPLIFPATDI 577
>AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle
preferentially expressed protein protein.
Length = 3094
Score = 31.1 bits (67), Expect = 9.4
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +3
Query: 582 PSNAASTPNTAIAPPLIFPSTPVLAPVVSPPIINRTPEGKPVRKGYVPVEEKIQKELQEM 761
P A+ P PP PS L P SP + R+P G P + P + + +
Sbjct: 159 PQLASEAPRRPAQPP---PSKSALLPPPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPVL 215
Query: 762 KDREQELKKMRKKQK 806
+ +K KK K
Sbjct: 216 PEDTTTEEKRGKKSK 230
>AL121992-8|CAI95731.1| 617|Homo sapiens regulatory solute carrier
protein, family 1, member 1 protein.
Length = 617
Score = 31.1 bits (67), Expect = 9.4
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 576 PPPSNAASTPNTAIAPPLIFPSTPV 650
PP S+ +S+P AI PPLIFP+T +
Sbjct: 555 PPTSHPSSSP--AILPPLIFPATDI 577
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 31.1 bits (67), Expect = 9.4
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 561 SKGKLPPPSNAASTPNTAIAPPLIFPSTPVL-APVVSPPIINRTPEGKP 704
S G PPPS+ + P+ A P P P P + PP +++ G P
Sbjct: 471 SPGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAP 519
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 31.1 bits (67), Expect = 9.4
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 561 SKGKLPPPSNAASTPNTAIAPPLIFPSTPVL-APVVSPPIINRTPEGKP 704
S G PPPS+ + P+ A P P P P + PP +++ G P
Sbjct: 342 SPGTPPPPSSPSFPPHPDFAAPPPLPPPPAADYPTLPPPPLSQPTRGAP 390
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,260,836
Number of Sequences: 237096
Number of extensions: 2865586
Number of successful extensions: 16438
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 13704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16216
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19238006034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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