Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_J02
         (1334 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    28   0.70 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    28   0.70 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.7  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   8.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   8.6  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   8.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   8.6  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 27.9 bits (59), Expect = 0.70
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +3

Query: 558 NANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKH-QQXCQTTTNETD--DD 728
           N +QE    DSN ++++ETS  L       ++     S  ++H  +  Q+ T E +  D+
Sbjct: 709 NLSQEESSIDSNLSSDRETSPDLPSIDDRLLHRGVTASSFIQHATEKLQSLTQELNQSDE 768

Query: 729 KLXEEISKQIN 761
           +L + I  Q N
Sbjct: 769 ELEQAIKNQRN 779


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 27.9 bits (59), Expect = 0.70
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +3

Query: 558 NANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKH-QQXCQTTTNETD--DD 728
           N +QE    DSN ++++ETS  L       ++     S  ++H  +  Q+ T E +  D+
Sbjct: 709 NLSQEESSIDSNLSSDRETSPDLPSIDDRLLHRGVTASSFIQHATEKLQSLTQELNQSDE 768

Query: 729 KLXEEISKQIN 761
           +L + I  Q N
Sbjct: 769 ELEQAIKNQRN 779


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 852 HHHHHHXXL*PLHQRL*PLAHQLCHLSNPYH 760
           HHHHHH    P H +    A   C+   P H
Sbjct: 183 HHHHHHHHH-PHHSQQQHSASPRCYPMPPEH 212


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 861 LXXHHHHHH 835
           L  HHHHHH
Sbjct: 159 LHHHHHHHH 167


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 852 HHHHHHXXL 826
           HHHHHH  L
Sbjct: 434 HHHHHHSAL 442


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 861 LXXHHHHHH 835
           L  HHHHHH
Sbjct: 121 LHHHHHHHH 129


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 429 MALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGF 536
           M LT  L++  +   EH   +  ++K++KV   A F
Sbjct: 331 MRLTTDLQERSLAAAEHRTAKTRLEKAIKVGKRAEF 366


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,938
Number of Sequences: 2352
Number of extensions: 14480
Number of successful extensions: 67
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 153210915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)