Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_J01
         (1272 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p pro...   128   2e-29
AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA...   128   2e-29
AY089259-1|AAL89997.1|  353|Drosophila melanogaster AT04640p pro...    49   1e-05
AF170565-1|AAD51100.1|  353|Drosophila melanogaster eyes closed ...    49   1e-05
AE013599-3868|AAF47202.2|  353|Drosophila melanogaster CG4556-PA...    49   1e-05
AY071503-1|AAL49125.1|  627|Drosophila melanogaster RE55932p pro...    30   7.8  
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.      30   7.8  
AE014296-3147|AAF49162.2|  892|Drosophila melanogaster CG9594-PA...    30   7.8  

>AY058260-1|AAL13489.1|  407|Drosophila melanogaster GH01724p protein.
          Length = 407

 Score =  128 bits (309), Expect = 2e-29
 Identities = 93/296 (31%), Positives = 134/296 (45%), Gaps = 22/296 (7%)
 Frame = +1

Query: 184  REDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYENG----------GNADEVPAN 333
            R D + QF ++TG DE+ ++F+L S +W ++ AL +++             G+AD     
Sbjct: 4    RGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVPVPTVGHADNPKPK 63

Query: 334  PTSA----ASFSVLPDSDMXXXXXXXXXXXXXXXXXXXTSNTKFGTIGXXXXXXXXXXXX 501
            PTS+    AS S    +                      +  KF T+             
Sbjct: 64   PTSSSGASASASAAGATKSADSAVATSSASVDIAPAATKAKPKFATLSDMSKESSSDDDQ 123

Query: 502  XXAFYAGGSERSGQQILGPSKGR--KDIVSEMFKSVRERG-AVVFEDEPTSSXXXXXXXX 672
              AFYAGGS+RSGQQ+LGP K +  ++ +++M +S +E+  A V     + S        
Sbjct: 124  Q-AFYAGGSDRSGQQVLGPPKRKNFREQLTDMMRSAQEQNIAEVGPSTSSGSASGGSGGA 182

Query: 673  XXXXXXXLGQTADDHEPVSASNPQQQ-EQVRLVRLCLYREGFTVDAGPLRHYSDPENAEF 849
                   LG T +DH  V    P    E   +V L L+ +GF++D G LRHY DP+N EF
Sbjct: 183  VWGQGMRLGMTDNDHTAVGTKKPAATIENKPVVVLKLWSQGFSIDGGELRHYDDPQNKEF 242

Query: 850  LSCIRRGEIPSELSGQGVSVRVSLXDSXHXECPDTWSXRRPSP----GKGHMLGXP 1005
            L  + RGEIP EL   G  V V + D  H +       R+P P    G G  LG P
Sbjct: 243  LETVMRGEIPQELLEMGRMVNVDVEDHRHED-----FKRQPVPQTFKGSGQKLGSP 293


>AE013599-417|AAF59249.1|  407|Drosophila melanogaster CG11139-PA
            protein.
          Length = 407

 Score =  128 bits (309), Expect = 2e-29
 Identities = 93/296 (31%), Positives = 134/296 (45%), Gaps = 22/296 (7%)
 Frame = +1

Query: 184  REDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYENG----------GNADEVPAN 333
            R D + QF ++TG DE+ ++F+L S +W ++ AL +++             G+AD     
Sbjct: 4    RGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVPVPTVGHADNPKPK 63

Query: 334  PTSA----ASFSVLPDSDMXXXXXXXXXXXXXXXXXXXTSNTKFGTIGXXXXXXXXXXXX 501
            PTS+    AS S    +                      +  KF T+             
Sbjct: 64   PTSSSGASASASAAGATKSADSAVATSSASVDIAPAATKAKPKFATLSDMSKESSSDDDQ 123

Query: 502  XXAFYAGGSERSGQQILGPSKGR--KDIVSEMFKSVRERG-AVVFEDEPTSSXXXXXXXX 672
              AFYAGGS+RSGQQ+LGP K +  ++ +++M +S +E+  A V     + S        
Sbjct: 124  Q-AFYAGGSDRSGQQVLGPPKRKNFREQLTDMMRSAQEQNIAEVGPSTSSGSASGGSGGA 182

Query: 673  XXXXXXXLGQTADDHEPVSASNPQQQ-EQVRLVRLCLYREGFTVDAGPLRHYSDPENAEF 849
                   LG T +DH  V    P    E   +V L L+ +GF++D G LRHY DP+N EF
Sbjct: 183  VWGQGMRLGMTDNDHTAVGTKKPAATIENKPVVVLKLWSQGFSIDGGELRHYDDPQNKEF 242

Query: 850  LSCIRRGEIPSELSGQGVSVRVSLXDSXHXECPDTWSXRRPSP----GKGHMLGXP 1005
            L  + RGEIP EL   G  V V + D  H +       R+P P    G G  LG P
Sbjct: 243  LETVMRGEIPQELLEMGRMVNVDVEDHRHED-----FKRQPVPQTFKGSGQKLGSP 293


>AY089259-1|AAL89997.1|  353|Drosophila melanogaster AT04640p protein.
          Length = 353

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 34/95 (35%), Positives = 44/95 (46%)
 Frame = +1

Query: 727  SASNPQQQEQVRLVRLCLYREGFTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQGVS 906
            S + P   E   +V L L+ EGF++D G LR Y+ PEN  FL  I RG+ P E+      
Sbjct: 147  SDTEPADDEHT-IVVLHLWSEGFSLDDGSLRLYALPENERFLRAILRGDFPEEMLR---V 202

Query: 907  VRVSLXDSXHXECPDTWSXRRPSPGKGHMLGXPTP 1011
             RV L    H         R+   G G  L  P+P
Sbjct: 203  PRVQLSVQDHTNESYRHLSRKQFMGPGRPLNSPSP 237


>AF170565-1|AAD51100.1|  353|Drosophila melanogaster eyes closed
            protein.
          Length = 353

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 34/95 (35%), Positives = 44/95 (46%)
 Frame = +1

Query: 727  SASNPQQQEQVRLVRLCLYREGFTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQGVS 906
            S + P   E   +V L L+ EGF++D G LR Y+ PEN  FL  I RG+ P E+      
Sbjct: 147  SDTEPADDEHT-IVVLHLWSEGFSLDDGSLRLYALPENERFLRAILRGDFPEEMLR---V 202

Query: 907  VRVSLXDSXHXECPDTWSXRRPSPGKGHMLGXPTP 1011
             RV L    H         R+   G G  L  P+P
Sbjct: 203  PRVQLSVQDHTNESYRHLSRKQFMGPGRPLNSPSP 237


>AE013599-3868|AAF47202.2|  353|Drosophila melanogaster CG4556-PA
            protein.
          Length = 353

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 34/95 (35%), Positives = 44/95 (46%)
 Frame = +1

Query: 727  SASNPQQQEQVRLVRLCLYREGFTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQGVS 906
            S + P   E   +V L L+ EGF++D G LR Y+ PEN  FL  I RG+ P E+      
Sbjct: 147  SDTEPADDEHT-IVVLHLWSEGFSLDDGSLRLYALPENERFLRAILRGDFPEEMLR---V 202

Query: 907  VRVSLXDSXHXECPDTWSXRRPSPGKGHMLGXPTP 1011
             RV L    H         R+   G G  L  P+P
Sbjct: 203  PRVQLSVQDHTNESYRHLSRKQFMGPGRPLNSPSP 237


>AY071503-1|AAL49125.1|  627|Drosophila melanogaster RE55932p protein.
          Length = 627

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 1012 GAWXCPACVPSPAKAXGLTTCR 947
            G W CP C+P P KA  + + R
Sbjct: 72   GDWICPRCIPLPGKAEKILSWR 93


>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
          Length = 1518

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 1012 GAWXCPACVPSPAKAXGLTTCR 947
            G W CP C+P P KA  + + R
Sbjct: 75   GDWICPRCIPLPGKAEKILSWR 96


>AE014296-3147|AAF49162.2|  892|Drosophila melanogaster CG9594-PA
            protein.
          Length = 892

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 1012 GAWXCPACVPSPAKAXGLTTCR 947
            G W CP C+P P KA  + + R
Sbjct: 72   GDWICPRCIPLPGKAEKILSWR 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,587,498
Number of Sequences: 53049
Number of extensions: 820035
Number of successful extensions: 2527
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2525
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)