Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_J01
         (1272 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024876-9|AAF60887.2|  301|Caenorhabditis elegans Hypothetical ...    45   1e-04
AC024089-4|AAK09073.2|  239|Caenorhabditis elegans Hypothetical ...    33   0.33 
AL024499-1|CAB54261.2|  295|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical p...    31   2.3  
Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical pr...    31   2.3  
AC024876-10|AAP31418.1|  193|Caenorhabditis elegans Hypothetical...    30   3.0  
AF106584-2|AAC78222.2|  316|Caenorhabditis elegans Hypothetical ...    29   7.0  
AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical ...    29   9.3  

>AC024876-9|AAF60887.2|  301|Caenorhabditis elegans Hypothetical
            protein Y94H6A.9a protein.
          Length = 301

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 28/91 (30%), Positives = 40/91 (43%)
 Frame = +1

Query: 739  PQQQEQVRLVRLCLYREGFTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQGVSVRVS 918
            P  +E + L  L L+ +G +++ GPL    DP   EFL  + +GEIP  L  Q     + 
Sbjct: 84   PSGRETISLT-LHLWSDGLSIEDGPLMSRQDPRTIEFLESVGKGEIPPSLVQQYPGKEID 142

Query: 919  LXDSXHXECPDTWSXRRPSPGKGHMLGXPTP 1011
               + H E        +P  G G  LG   P
Sbjct: 143  FKVNRHHE-EYVAPKMKPFGGSGVRLGNVVP 172


>AC024089-4|AAK09073.2|  239|Caenorhabditis elegans Hypothetical
           protein C36E6.2 protein.
          Length = 239

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +1

Query: 181 NREDTLRQFCDVTGAD---EDRSKFFLESSNWQLDVALSSFYENGGN 312
           +RE+ + +F ++        D + F+L+ +NW L  A+S FY+  G+
Sbjct: 19  DRENLIHKFEEIISPQMIPHDLAAFYLDLANWNLSTAISVFYDQNGD 65


>AL024499-1|CAB54261.2|  295|Caenorhabditis elegans Hypothetical
           protein H38K22.2a protein.
          Length = 295

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 172 MSXNREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYEN 303
           +  +++  LRQF   T   E  S  FL  +NW ++ A++ +++N
Sbjct: 4   LKSDQKTKLRQFVQWTQVTEAVSLNFLAKANWNIEYAMTLYFDN 47


>Z46787-16|CAO78703.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 325 EPHLHYH-RSHRNLKEQHLIASLRILKRIYCD--LRQHR*HHKTDVMYLPYSQTW*FRIY 155
           +P L  H + H N+   H +A L +   +  +  L+  R HH T V Y P+   W + I 
Sbjct: 59  QPALRCHSKQHHNILSPHALAVLSLGADVLPEYKLQPTRIHHCTIVHYSPFKAVWDWIIL 118

Query: 154 IL 149
           +L
Sbjct: 119 LL 120


>Z35596-2|CAO78713.1|  821|Caenorhabditis elegans Hypothetical
           protein C30D11.1b protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 325 EPHLHYH-RSHRNLKEQHLIASLRILKRIYCD--LRQHR*HHKTDVMYLPYSQTW*FRIY 155
           +P L  H + H N+   H +A L +   +  +  L+  R HH T V Y P+   W + I 
Sbjct: 59  QPALRCHSKQHHNILSPHALAVLSLGADVLPEYKLQPTRIHHCTIVHYSPFKAVWDWIIL 118

Query: 154 IL 149
           +L
Sbjct: 119 LL 120


>AC024876-10|AAP31418.1|  193|Caenorhabditis elegans Hypothetical
            protein Y94H6A.9b protein.
          Length = 193

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +1

Query: 829  DPENAEFLSCIRRGEIPSELSGQGVSVRVSLXDSXHXECPDTWSXRRPSPGKGHMLGXPT 1008
            DP   EFL  + +GEIP  L  Q     +    + H E        +P  G G  LG   
Sbjct: 5    DPRTIEFLESVGKGEIPPSLVQQYPGKEIDFKVNRHHE-EYVAPKMKPFGGSGVRLGNVV 63

Query: 1009 P 1011
            P
Sbjct: 64   P 64


>AF106584-2|AAC78222.2|  316|Caenorhabditis elegans Hypothetical
           protein F54A5.3a protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 787 EGFTVDAGPLRHYSDPENAEFLSCIRRGEIPSELSGQ 897
           +GFTV A P+RH S      F+S  R   +  ++ G+
Sbjct: 173 DGFTVPAPPMRHRSSLHRQSFVSNCRAPTVTEDVVGK 209


>AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical
           protein Y50D4A.1 protein.
          Length = 821

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 826 SDPENAEFLSCIRRGEIPSELSGQGVSVRV 915
           SDPENAEFLS     +   + SG  ++V++
Sbjct: 509 SDPENAEFLSIKEARKTVEDASGCKIAVKI 538


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,681,904
Number of Sequences: 27780
Number of extensions: 404840
Number of successful extensions: 1165
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3547715720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)