Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_I24
(1252 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000719-1|AAH00719.1| 393|Homo sapiens ATG4 autophagy related ... 172 2e-42
AK125277-1|BAC86110.1| 468|Homo sapiens protein ( Homo sapiens ... 172 2e-42
AK027763-1|BAB55353.1| 380|Homo sapiens protein ( Homo sapiens ... 172 2e-42
AJ504652-1|CAD43219.1| 393|Homo sapiens autophagin-1 protein. 172 2e-42
AC133528-3|AAY14919.1| 393|Homo sapiens unknown protein. 172 2e-42
AB023160-1|BAA76787.2| 396|Homo sapiens KIAA0943 protein protein. 172 2e-42
AB066215-1|BAB83890.1| 392|Homo sapiens Apg4B protein. 165 2e-40
BC061696-1|AAH61696.1| 398|Homo sapiens ATG4 autophagy related ... 158 4e-38
AL031177-11|CAI43138.1| 336|Homo sapiens ATG4 autophagy related... 158 4e-38
AL031177-10|CAI43137.1| 398|Homo sapiens ATG4 autophagy related... 158 4e-38
AJ504651-1|CAD43218.1| 398|Homo sapiens autophagin-2 protein. 158 4e-38
AJ320509-1|CAC69077.1| 336|Homo sapiens putative autophagy-rela... 158 4e-38
AJ320508-1|CAC69076.1| 398|Homo sapiens putative autophagy-rela... 158 4e-38
AB066214-1|BAB83889.1| 398|Homo sapiens Apg4A protein. 158 4e-38
AL031177-14|CAI43141.1| 311|Homo sapiens ATG4 autophagy related... 126 2e-28
AL031177-9|CAO03368.1| 231|Homo sapiens ATG4 autophagy related ... 116 2e-25
AK054927-1|BAB70829.1| 168|Homo sapiens protein ( Homo sapiens ... 116 2e-25
AK027462-1|BAB55127.1| 331|Homo sapiens protein ( Homo sapiens ... 101 5e-21
AK027332-1|BAB55042.1| 280|Homo sapiens r (MAFB) mRNA. protein. 101 5e-21
BC068992-1|AAH68992.1| 474|Homo sapiens ATG4 autophagy related ... 74 7e-21
AK223383-1|BAD97103.1| 474|Homo sapiens APG4 autophagy 4 homolo... 74 7e-21
AJ312332-1|CAC85951.1| 474|Homo sapiens APG4-D protein protein. 74 7e-21
BC041862-1|AAH41862.1| 321|Homo sapiens ATG4 autophagy related ... 100 1e-20
AL031177-15|CAI43142.1| 202|Homo sapiens ATG4 autophagy related... 100 1e-20
BC033024-1|AAH33024.1| 458|Homo sapiens ATG4 autophagy related ... 62 4e-09
AK027773-1|BAB55356.1| 446|Homo sapiens protein ( Homo sapiens ... 62 4e-09
AJ320169-1|CAC43939.1| 458|Homo sapiens putative autophagy-rela... 62 4e-09
AJ312234-1|CAC85556.1| 458|Homo sapiens Apg4-C protein protein. 62 4e-09
BC018678-1|AAH18678.1| 451|Homo sapiens Unknown (protein for IM... 62 5e-09
AK056210-1|BAB71121.1| 330|Homo sapiens protein ( Homo sapiens ... 49 8e-08
>BC000719-1|AAH00719.1| 393|Homo sapiens ATG4 autophagy related 4
homolog B (S. cerevisiae) protein.
Length = 393
Score = 172 bits (419), Expect = 2e-42
Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 EPNDIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGC 409
E D P+T E +W+LG+KYS + D I D+ S +W TYRK F IG G TSD GWGC
Sbjct: 15 EFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGC 74
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 75 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 134
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 135 EGKSIGQWYGPNTVAQVLK 153
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 151 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 179
>AK125277-1|BAC86110.1| 468|Homo sapiens protein ( Homo sapiens
cDNA FLJ43287 fis, clone MESAN2006563. ).
Length = 468
Score = 172 bits (419), Expect = 2e-42
Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 EPNDIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGC 409
E D P+T E +W+LG+KYS + D I D+ S +W TYRK F IG G TSD GWGC
Sbjct: 103 EFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGC 162
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 163 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 222
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 223 EGKSIGQWYGPNTVAQVLK 241
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 239 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 267
>AK027763-1|BAB55353.1| 380|Homo sapiens protein ( Homo sapiens
cDNA FLJ14857 fis, clone PLACE1001185. ).
Length = 380
Score = 172 bits (419), Expect = 2e-42
Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 EPNDIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGC 409
E D P+T E +W+LG+KYS + D I D+ S +W TYRK F IG G TSD GWGC
Sbjct: 15 EFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGC 74
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 75 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 134
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 135 EGKSIGQWYGPNTVAQVLK 153
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 151 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 179
>AJ504652-1|CAD43219.1| 393|Homo sapiens autophagin-1 protein.
Length = 393
Score = 172 bits (419), Expect = 2e-42
Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 EPNDIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGC 409
E D P+T E +W+LG+KYS + D I D+ S +W TYRK F IG G TSD GWGC
Sbjct: 15 EFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGC 74
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 75 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 134
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 135 EGKSIGQWYGPNTVAQVLK 153
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 151 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 179
>AC133528-3|AAY14919.1| 393|Homo sapiens unknown protein.
Length = 393
Score = 172 bits (419), Expect = 2e-42
Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 EPNDIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGC 409
E D P+T E +W+LG+KYS + D I D+ S +W TYRK F IG G TSD GWGC
Sbjct: 15 EFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGC 74
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 75 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 134
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 135 EGKSIGQWYGPNTVAQVLK 153
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 151 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 179
>AB023160-1|BAA76787.2| 396|Homo sapiens KIAA0943 protein protein.
Length = 396
Score = 172 bits (419), Expect = 2e-42
Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 EPNDIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGC 409
E D P+T E +W+LG+KYS + D I D+ S +W TYRK F IG G TSD GWGC
Sbjct: 18 EFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGC 77
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 78 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 137
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 138 EGKSIGQWYGPNTVAQVLK 156
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 154 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 182
>AB066215-1|BAB83890.1| 392|Homo sapiens Apg4B protein.
Length = 392
Score = 165 bits (402), Expect = 2e-40
Identities = 74/139 (53%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
Frame = +2
Query: 230 EPNDIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGC 409
E D P+T E +W+LG+KYS + D I D+ S +W TYRK F IG G TSD GWGC
Sbjct: 15 EFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGC 74
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 75 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 134
Query: 587 EGKEVGQWFGPNTIAQVLK 643
E K +GQW+GPNT+AQVLK
Sbjct: 135 E-KSIGQWYGPNTVAQVLK 152
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 150 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 178
>BC061696-1|AAH61696.1| 398|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 398
Score = 158 bits (383), Expect = 4e-38
Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGASEGK 595
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG EGK
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGK 140
Query: 596 EVGQWFGPNTIAQVLK 643
+G+WFGPNT+AQVLK
Sbjct: 141 SIGEWFGPNTVAQVLK 156
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 154 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 184
>AL031177-11|CAI43138.1| 336|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 336
Score = 158 bits (383), Expect = 4e-38
Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGASEGK 595
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG EGK
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGK 140
Query: 596 EVGQWFGPNTIAQVLK 643
+G+WFGPNT+AQVLK
Sbjct: 141 SIGEWFGPNTVAQVLK 156
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 154 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 184
>AL031177-10|CAI43137.1| 398|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 398
Score = 158 bits (383), Expect = 4e-38
Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGASEGK 595
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG EGK
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGK 140
Query: 596 EVGQWFGPNTIAQVLK 643
+G+WFGPNT+AQVLK
Sbjct: 141 SIGEWFGPNTVAQVLK 156
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 154 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 184
>AJ504651-1|CAD43218.1| 398|Homo sapiens autophagin-2 protein.
Length = 398
Score = 158 bits (383), Expect = 4e-38
Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGASEGK 595
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG EGK
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGK 140
Query: 596 EVGQWFGPNTIAQVLK 643
+G+WFGPNT+AQVLK
Sbjct: 141 SIGEWFGPNTVAQVLK 156
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 154 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 184
>AJ320509-1|CAC69077.1| 336|Homo sapiens putative autophagy-related
cysteine endopeptidase protein.
Length = 336
Score = 158 bits (383), Expect = 4e-38
Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGASEGK 595
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG EGK
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGK 140
Query: 596 EVGQWFGPNTIAQVLK 643
+G+WFGPNT+AQVLK
Sbjct: 141 SIGEWFGPNTVAQVLK 156
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 154 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 184
>AJ320508-1|CAC69076.1| 398|Homo sapiens putative autophagy-related
cysteine endopeptidase protein.
Length = 398
Score = 158 bits (383), Expect = 4e-38
Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGASEGK 595
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG EGK
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGK 140
Query: 596 EVGQWFGPNTIAQVLK 643
+G+WFGPNT+AQVLK
Sbjct: 141 SIGEWFGPNTVAQVLK 156
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 154 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 184
>AB066214-1|BAB83889.1| 398|Homo sapiens Apg4A protein.
Length = 398
Score = 158 bits (383), Expect = 4e-38
Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGASEGK 595
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG EGK
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGK 140
Query: 596 EVGQWFGPNTIAQVLK 643
+G+WFGPNT+AQVLK
Sbjct: 141 SIGEWFGPNTVAQVLK 156
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 154 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 184
>AL031177-14|CAI43141.1| 311|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 311
Score = 126 bits (303), Expect = 2e-28
Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = +2
Query: 320 DITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVWSPETRD 499
D ++W ++ + G G +SD GWGCMLRCGQM+L AL+ HL DW W +
Sbjct: 20 DTDELVWILGKQHLLKTGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWSWEKQKEQ 79
Query: 500 PT-YLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
P Y +I+Q F +RK YSIHQ+A MG EGK +G+WFGPNT+AQVLK
Sbjct: 80 PKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLK 128
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 126 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 156
>AL031177-9|CAO03368.1| 231|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 231
Score = 116 bits (279), Expect = 2e-25
Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALM 577
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+ M
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMEKM 134
>AK054927-1|BAB70829.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ30365 fis, clone BRACE2007784, weakly similar to
Putative Protein that mediates attachment of
autophagosomes to ).
Length = 168
Score = 116 bits (279), Expect = 2e-25
Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +2
Query: 239 DIPKTKESIWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLR 418
+ P T E +W+LGK++ + ++ DI++ +W TYR+ F PIG G +SD GWGCMLR
Sbjct: 21 EYPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRKFSPIGGTGPSSDAGWGCMLR 80
Query: 419 CGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALM 577
CGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+ M
Sbjct: 81 CGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMEKM 134
>AK027462-1|BAB55127.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ14556 fis, clone NT2RM2001867. ).
Length = 331
Score = 101 bits (242), Expect = 5e-21
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +2
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 61 EGKSIGQWYGPNTVAQVLK 79
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 77 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 105
>AK027332-1|BAB55042.1| 280|Homo sapiens r (MAFB) mRNA. protein.
Length = 280
Score = 101 bits (242), Expect = 5e-21
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +2
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDP-TYLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+ ALV HL DW W+ R P +Y ++ F +RK + YSIHQ+A MG
Sbjct: 1 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVG 60
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +GQW+GPNT+AQVLK
Sbjct: 61 EGKSIGQWYGPNTVAQVLK 79
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDI 955
V +KL V+D WS L +H+A+DNTVV E+I
Sbjct: 77 VLKKLAVFDTWSSLAVHIAMDNTVVMEEI 105
>BC068992-1|AAH68992.1| 474|Homo sapiens ATG4 autophagy related 4
homolog D (S. cerevisiae) protein.
Length = 474
Score = 74.1 bits (174), Expect(2) = 7e-21
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 SIWVLGKKY--SAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMV 433
SI + G++Y D+ R +RD S +W TYR+ F P+ LTSD GWGCMLR GQM+
Sbjct: 93 SIHLCGRRYRFEGEGDIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMM 152
Query: 434 LGVALVRVHLSVDWVWS 484
L L+ L DW W+
Sbjct: 153 LAQGLLLHFLPRDWTWA 169
Score = 47.6 bits (108), Expect(2) = 7e-21
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 482 SPET-RDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
+PE ++ + +I+ F + +AP+ +H++ +G S GK+ G W+GP+ +A +L+
Sbjct: 203 APELEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILR 257
>AK223383-1|BAD97103.1| 474|Homo sapiens APG4 autophagy 4 homolog D
variant protein.
Length = 474
Score = 74.1 bits (174), Expect(2) = 7e-21
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 SIWVLGKKY--SAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMV 433
SI + G++Y D+ R +RD S +W TYR+ F P+ LTSD GWGCMLR GQM+
Sbjct: 93 SIHLCGRRYRFEGEGDIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMM 152
Query: 434 LGVALVRVHLSVDWVWS 484
L L+ L DW W+
Sbjct: 153 LAQGLLLHFLPRDWTWA 169
Score = 47.6 bits (108), Expect(2) = 7e-21
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 482 SPET-RDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
+PE ++ + +I+ F + +AP+ +H++ +G S GK+ G W+GP+ +A +L+
Sbjct: 203 APELEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILR 257
>AJ312332-1|CAC85951.1| 474|Homo sapiens APG4-D protein protein.
Length = 474
Score = 74.1 bits (174), Expect(2) = 7e-21
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 SIWVLGKKY--SAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMV 433
SI + G++Y D+ R +RD S +W TYR+ F P+ LTSD GWGCMLR GQM+
Sbjct: 93 SIHLCGRRYRFEGEGDIQRFQRDFVSRLWLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMM 152
Query: 434 LGVALVRVHLSVDWVWS 484
L L+ L DW W+
Sbjct: 153 LAQGLLLHFLPRDWTWA 169
Score = 47.6 bits (108), Expect(2) = 7e-21
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 482 SPET-RDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
+PE ++ + +I+ F + +AP+ +H++ +G S GK+ G W+GP+ +A +L+
Sbjct: 203 APELEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILR 257
>BC041862-1|AAH41862.1| 321|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 321
Score = 100 bits (239), Expect = 1e-20
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +2
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDPT-YLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG
Sbjct: 1 MLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVG 60
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +G+WFGPNT+AQVLK
Sbjct: 61 EGKSIGEWFGPNTVAQVLK 79
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 77 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 107
>AL031177-15|CAI43142.1| 202|Homo sapiens ATG4 autophagy related 4
homolog A (S. cerevisiae) protein.
Length = 202
Score = 100 bits (239), Expect = 1e-20
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +2
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWSPETRDPT-YLKIIQRFEERKQAPYSIHQVALMGAS 586
MLRCGQM+L AL+ HL DW W + P Y +I+Q F +RK YSIHQ+A MG
Sbjct: 1 MLRCGQMMLAQALICRHLGRDWSWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVG 60
Query: 587 EGKEVGQWFGPNTIAQVLK 643
EGK +G+WFGPNT+AQVLK
Sbjct: 61 EGKSIGEWFGPNTVAQVLK 79
Score = 40.7 bits (91), Expect = 0.011
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKEDICK 961
V +KL ++D+W+ L ++V++DNTVV EDI K
Sbjct: 77 VLKKLALFDEWNSLAVYVSMDNTVVIEDIKK 107
>BC033024-1|AAH33024.1| 458|Homo sapiens ATG4 autophagy related 4
homolog C (S. cerevisiae) protein.
Length = 458
Score = 62.1 bits (144), Expect = 4e-09
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +2
Query: 299 DLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWV 478
+++ R+D S IW TYR+ F I LT+D GWGC LR GQM+L L+ L W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 479 W 481
W
Sbjct: 135 W 135
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 488 ETRDPTY-LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
E R+ Y KII F + A + +HQ+ G GK+ G W+GP +A +L+
Sbjct: 190 EMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILR 242
>AK027773-1|BAB55356.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ14867 fis, clone PLACE1002319. ).
Length = 446
Score = 62.1 bits (144), Expect = 4e-09
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +2
Query: 299 DLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWV 478
+++ R+D S IW TYR+ F I LT+D GWGC LR GQM+L L+ L W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 479 W 481
W
Sbjct: 135 W 135
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 488 ETRDPTY-LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
E R+ Y KII F + A + +HQ+ G GK+ G W+GP +A +L+
Sbjct: 190 EMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILR 242
>AJ320169-1|CAC43939.1| 458|Homo sapiens putative autophagy-related
cysteine endopeptidase protein.
Length = 458
Score = 62.1 bits (144), Expect = 4e-09
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +2
Query: 299 DLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWV 478
+++ R+D S IW TYR+ F I LT+D GWGC LR GQM+L L+ L W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 479 W 481
W
Sbjct: 135 W 135
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 488 ETRDPTY-LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
E R+ Y KII F + A + +HQ+ G GK+ G W+GP +A +L+
Sbjct: 190 EMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILR 242
>AJ312234-1|CAC85556.1| 458|Homo sapiens Apg4-C protein protein.
Length = 458
Score = 62.1 bits (144), Expect = 4e-09
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = +2
Query: 299 DLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWV 478
+++ R+D S IW TYR+ F I LT+D GWGC LR GQM+L L+ L W
Sbjct: 75 NVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWT 134
Query: 479 W 481
W
Sbjct: 135 W 135
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 488 ETRDPTY-LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
E R+ Y KII F + A + +HQ+ G GK+ G W+GP +A +L+
Sbjct: 190 EMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILR 242
>BC018678-1|AAH18678.1| 451|Homo sapiens Unknown (protein for
IMAGE:4657137) protein.
Length = 451
Score = 61.7 bits (143), Expect = 5e-09
Identities = 27/60 (45%), Positives = 34/60 (56%)
Frame = +2
Query: 302 LDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVW 481
++ R+D S IW TYR+ F I LT+D GWGC LR GQM+L L+ L W W
Sbjct: 76 VEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLLAQGLILHFLGRAWTW 135
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 488 ETRDPTY-LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
E R+ Y KII F + A + +HQ+ G GK+ G W+GP +A +L+
Sbjct: 190 EMRNEVYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHILR 242
>AK056210-1|BAB71121.1| 330|Homo sapiens protein ( Homo sapiens
cDNA FLJ31648 fis, clone NT2RI2004059. ).
Length = 330
Score = 49.2 bits (112), Expect(2) = 8e-08
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 482 SPET-RDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLK 643
+PE R+ + +I+ F + +AP+ +H++ +G S GK+ G W+GP+ +A +L+
Sbjct: 59 APELERERRHRQIVSWFADHPRAPFGLHRLVELGQSSGKKAGDWYGPSLVAHILR 113
Score = 28.3 bits (60), Expect(2) = 8e-08
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 410 MLRCGQMVLGVALVRVHLSVDWVWS 484
MLR GQM+L L+ L DW W+
Sbjct: 1 MLRSGQMMLAQGLLLHFLPRDWTWA 25
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,055,354
Number of Sequences: 237096
Number of extensions: 3134292
Number of successful extensions: 4943
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4921
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17834978520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -