Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_I24
         (1252 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical ...   143   2e-34
Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical pr...    62   6e-10
U37548-4|AAA79200.2|  373|Caenorhabditis elegans Hypothetical pr...    30   3.9  
U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc seven...    29   9.1  
U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc seven...    29   9.1  

>AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical
           protein Y87G2A.3 protein.
          Length = 493

 Score =  143 bits (347), Expect = 2e-34
 Identities = 64/127 (50%), Positives = 86/127 (67%)
 Frame = +2

Query: 263 IWVLGKKYSAIQDLDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGV 442
           I+ LGK+ S    ++ +++ +TS  W TYR+ F PIG  G ++D+GWGCMLRC QM+LG 
Sbjct: 37  IFALGKEISKEDGIEAMKKYVTSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGE 96

Query: 443 ALVRVHLSVDWVWSPETRDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPN 622
            L+R H+   + W  E     Y KI+Q F + K A YSIHQ+A MG +EGKEV +WFGPN
Sbjct: 97  VLLRRHIGRHFEWDIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPN 156

Query: 623 TIAQVLK 643
           T AQV+K
Sbjct: 157 TAAQVMK 163



 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +2

Query: 869 VFRKLTVYDKWSXLXIHVALDNTVVKED 952
           V +KLT++D WS + +HVALDN +VKED
Sbjct: 161 VMKKLTIFDDWSNIAVHVALDNILVKED 188


>Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK792.8 protein.
          Length = 521

 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 25/149 (16%)
 Frame = +2

Query: 272 LGKKYSAIQDLDRIRR-------DITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQM 430
           LG++YS   D   +R        D  S +W TYR  F  + D   T+D GWGCM+R  QM
Sbjct: 151 LGRRYSTSVDESGLRSGFENFCSDYYSRLWITYRTDFPALLDTDTTTDCGWGCMIRTTQM 210

Query: 431 VLGVALVRVHLSVDWVWSPETR------------DPTYLK---IIQRFEERKQAPYSIHQ 565
           ++  A++      DW ++   R            D   ++   I++ FE++  AP  IH+
Sbjct: 211 MVAQAIMVNRFGRDWRFTRRKRSHVAAHGDEDDFDREKIQEWMILKLFEDKPTAPLGIHK 270

Query: 566 ---VALMGASEGKEVGQWFGPNTIAQVLK 643
              +A MG  + K VG W+ P+    ++K
Sbjct: 271 MVGIAAMGKGK-KAVGSWYSPSEAVFIMK 298


>U37548-4|AAA79200.2|  373|Caenorhabditis elegans Hypothetical
           protein C54D2.1 protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 828 YCCTSLVFFFIFTNIFHKHRANKVLG 751
           YCC +L+   +FTN    HRA +  G
Sbjct: 4   YCCIALISLIVFTNGASVHRAKRQFG 29


>U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical
           protein F48E8.3 protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -2

Query: 465 DKCTLTRATPNTICPHRNIQPHPLSEVKPSSPIGTKPFLYVHHIIDVISLLIRSK 301
           D   + RA    I    NIQ HP + V P  P     FL    I    +LLI SK
Sbjct: 237 DGVKIARALGAKIIGMENIQIHPTAFVDPKDPSAGTKFLAAEAIRGKGALLINSK 291


>U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 3 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 625 CIRSKPLANFFSFRGTHQCHLMDRI 551
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


>U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 4 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 625 CIRSKPLANFFSFRGTHQCHLMDRI 551
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,264,125
Number of Sequences: 27780
Number of extensions: 498626
Number of successful extensions: 1147
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)